RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 IP6K1Q92551 441 aa24.66■■□□□ 1.54
MCF2L-226ENST00000486210 NSD2O96028 1365 aa24.66■■□□□ 1.54
MCF2L-226ENST00000486210 KLHL34Q8N239 644 aa24.64■■□□□ 1.54
MCF2L-226ENST00000486210 LTV1Q96GA3 475 aaPredicted RBP24.63■■□□□ 1.53
MCF2L-226ENST00000486210 ANKRD36BQ8N2N9 1353 aa24.63■■□□□ 1.53
MCF2L-226ENST00000486210 GOLGB1Q14789 3259 aaKnown RBP24.63■■□□□ 1.53
MCF2L-226ENST00000486210 POLD1P28340 1107 aa24.62■■□□□ 1.53
MCF2L-226ENST00000486210 PRIM1P49642 420 aaKnown RBP24.62■■□□□ 1.53
MCF2L-226ENST00000486210 NLGN2Q8NFZ4 835 aa24.62■■□□□ 1.53
MCF2L-226ENST00000486210 TFCP2L1Q9NZI6 479 aa24.61■■□□□ 1.53
MCF2L-226ENST00000486210 SYTL4Q96C24 671 aaPredicted RBP24.6■■□□□ 1.53
MCF2L-226ENST00000486210 TERF2IPQ9NYB0 399 aa24.6■■□□□ 1.53
MCF2L-226ENST00000486210 FBLN1P23142 703 aa24.59■■□□□ 1.53
MCF2L-226ENST00000486210 PELP1Q8IZL8 1130 aaKnown RBP24.59■■□□□ 1.53
MCF2L-226ENST00000486210 MEGF6O75095 1541 aa24.59■■□□□ 1.53
MCF2L-226ENST00000486210 MAP3K19Q56UN5 1328 aa24.59■■□□□ 1.53
MCF2L-226ENST00000486210 HOXC9P31274 260 aa24.58■■□□□ 1.53
MCF2L-226ENST00000486210 PUS7Q96PZ0 661 aaKnown RBP24.57■■□□□ 1.52
MCF2L-226ENST00000486210 USP47Q96K76 1375 aa24.56■■□□□ 1.52
MCF2L-226ENST00000486210 GIGYF1O75420 1035 aaPredicted RBP24.55■■□□□ 1.52
MCF2L-226ENST00000486210 YBX3P16989 372 aaKnown RBP eCLIP24.54■■□□□ 1.52
MCF2L-226ENST00000486210 ZCRB1Q8TBF4 217 aaKnown RBP24.54■■□□□ 1.52
MCF2L-226ENST00000486210 CCNL1Q9UK58 526 aaPredicted RBP24.54■■□□□ 1.52
MCF2L-226ENST00000486210 ST20-MTHFSA0A0A6YYL1 179 aa24.53■■□□□ 1.52
MCF2L-226ENST00000486210 COL23A1Q86Y22 540 aaPredicted RBP24.53■■□□□ 1.52
MCF2L-226ENST00000486210 C5P01031 1676 aa24.53■■□□□ 1.52
MCF2L-226ENST00000486210 COG3Q96JB2 828 aa24.52■■□□□ 1.52
MCF2L-226ENST00000486210 HSPA5P11021 654 aaKnown RBP24.51■■□□□ 1.51
MCF2L-226ENST00000486210 AMPHP49418 695 aa24.51■■□□□ 1.51
MCF2L-226ENST00000486210 TAF1LQ8IZX4 1826 aa24.5■■□□□ 1.51
MCF2L-226ENST00000486210 SLC24A1O60721 1099 aa24.5■■□□□ 1.51
MCF2L-226ENST00000486210 TESK2Q96S53 571 aa24.5■■□□□ 1.51
MCF2L-226ENST00000486210 EIF4G2P78344 907 aaKnown RBP eCLIP24.49■■□□□ 1.51
MCF2L-226ENST00000486210 NBPF6Q5VWK0 638 aa24.48■■□□□ 1.51
MCF2L-226ENST00000486210 NBPF4Q96M43 638 aa24.48■■□□□ 1.51
MCF2L-226ENST00000486210 RTL1A6NKG5 1358 aa24.47■■□□□ 1.51
MCF2L-226ENST00000486210 MSL1Q68DK7 614 aa24.47■■□□□ 1.51
MCF2L-226ENST00000486210 USHBP1Q8N6Y0 703 aa24.47■■□□□ 1.51
MCF2L-226ENST00000486210 MSH5O43196 834 aa24.46■■□□□ 1.51
MCF2L-226ENST00000486210 GRIN3BO60391 1043 aa24.46■■□□□ 1.51
MCF2L-226ENST00000486210 RRS1Q15050 365 aaKnown RBP24.46■■□□□ 1.51
MCF2L-226ENST00000486210 TOGARAM1Q9Y4F4 1720 aa24.44■■□□□ 1.5
MCF2L-226ENST00000486210 ITGB4P16144 1822 aa24.42■■□□□ 1.5
MCF2L-226ENST00000486210 CGNL1Q0VF96 1302 aa24.42■■□□□ 1.5
MCF2L-226ENST00000486210 ATP10DQ9P241 1426 aa24.42■■□□□ 1.5
MCF2L-226ENST00000486210 FYB1O15117 783 aa24.4■■□□□ 1.5
MCF2L-226ENST00000486210 GGNBP2Q9H3C7 697 aa24.4■■□□□ 1.5
MCF2L-226ENST00000486210 C4BP0C0L5 1744 aa24.4■■□□□ 1.5
MCF2L-226ENST00000486210 RAPGEF4Q8WZA2 1011 aa24.39■■□□□ 1.49
MCF2L-226ENST00000486210 PALLDQ8WX93 1383 aa24.39■■□□□ 1.49
MCF2L-226ENST00000486210 UBR3Q6ZT12 1888 aa24.38■■□□□ 1.49
MCF2L-226ENST00000486210 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
MCF2L-226ENST00000486210 CD2APQ9Y5K6 639 aa24.38■■□□□ 1.49
MCF2L-226ENST00000486210 SMG6Q86US8 1419 aaKnown RBP24.37■■□□□ 1.49
MCF2L-226ENST00000486210 TATP17735 454 aaPredicted RBP24.37■■□□□ 1.49
MCF2L-226ENST00000486210 IFFO2Q5TF58 517 aa24.37■■□□□ 1.49
MCF2L-226ENST00000486210 AMIGO3Q86WK7 504 aa24.37■■□□□ 1.49
MCF2L-226ENST00000486210 CEP350Q5VT06 3117 aa24.37■■□□□ 1.49
MCF2L-226ENST00000486210 ADCY9O60503 1353 aa24.37■■□□□ 1.49
MCF2L-226ENST00000486210 PCDH11XQ9BZA7 1347 aa24.36■■□□□ 1.49
MCF2L-226ENST00000486210 PCDH11YQ9BZA8 1340 aa24.36■■□□□ 1.49
MCF2L-226ENST00000486210 PKD1L3Q7Z443 1732 aa24.36■■□□□ 1.49
MCF2L-226ENST00000486210 HSP90AB2PQ58FF8 381 aa24.36■■□□□ 1.49
MCF2L-226ENST00000486210 INSRP06213 1382 aa24.36■■□□□ 1.49
MCF2L-226ENST00000486210 CYP27B1O15528 508 aa24.35■■□□□ 1.49
MCF2L-226ENST00000486210 MAP2P11137 1827 aaKnown RBP24.34■■□□□ 1.49
MCF2L-226ENST00000486210 MPRIPQ6WCQ1 1025 aa24.34■■□□□ 1.49
MCF2L-226ENST00000486210 FLAD1Q8NFF5 587 aa24.34■■□□□ 1.49
MCF2L-226ENST00000486210 TMF1P82094 1093 aa24.33■■□□□ 1.49
MCF2L-226ENST00000486210 SMIM5Q71RC9 77 aa24.33■■□□□ 1.49
MCF2L-226ENST00000486210 FLT4P35916 1363 aa24.31■■□□□ 1.48
MCF2L-226ENST00000486210 CDCA8Q53HL2 280 aa24.3■■□□□ 1.48
MCF2L-226ENST00000486210 GPBP1L1Q9HC44 474 aaPredicted RBP24.3■■□□□ 1.48
MCF2L-226ENST00000486210 KIF24Q5T7B8 1368 aa24.29■■□□□ 1.48
MCF2L-226ENST00000486210 NCAPD2Q15021 1401 aa24.28■■□□□ 1.48
MCF2L-226ENST00000486210 PIGBQ92521 554 aa24.28■■□□□ 1.48
MCF2L-226ENST00000486210 AK7Q96M32 723 aa24.28■■□□□ 1.48
MCF2L-226ENST00000486210 IGSF1Q8N6C5 1336 aa24.28■■□□□ 1.48
MCF2L-226ENST00000486210 PHF14O94880 888 aa24.27■■□□□ 1.48
MCF2L-226ENST00000486210 SMARCC1Q92922 1105 aaPredicted RBP24.27■■□□□ 1.48
MCF2L-226ENST00000486210 WWC3Q9ULE0 1092 aa24.27■■□□□ 1.48
MCF2L-226ENST00000486210 HMGB2P26583 209 aaKnown RBP24.26■■□□□ 1.47
MCF2L-226ENST00000486210 ZNF526Q8TF50 670 aaPredicted RBP24.26■■□□□ 1.47
MCF2L-226ENST00000486210 ANKRD26Q9UPS8 1709 aa24.25■■□□□ 1.47
MCF2L-226ENST00000486210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.25■■□□□ 1.47
MCF2L-226ENST00000486210 EMILIN1Q9Y6C2 1016 aa24.25■■□□□ 1.47
MCF2L-226ENST00000486210 NKX1-1Q15270 411 aaPredicted RBP24.24■■□□□ 1.47
MCF2L-226ENST00000486210 HSPA6P17066 643 aa24.23■■□□□ 1.47
MCF2L-226ENST00000486210 LINC00116Q8NCU8 138 aa24.23■■□□□ 1.47
MCF2L-226ENST00000486210 KIAA1551Q9HCM1 1747 aa24.22■■□□□ 1.47
MCF2L-226ENST00000486210 CICQ96RK0 1608 aaPredicted RBP24.22■■□□□ 1.47
MCF2L-226ENST00000486210 NSD3Q9BZ95 1437 aa24.22■■□□□ 1.47
MCF2L-226ENST00000486210 SSFA2P28290 1259 aa24.22■■□□□ 1.47
MCF2L-226ENST00000486210 POLR3GLQ9BT43 218 aa24.22■■□□□ 1.47
MCF2L-226ENST00000486210 KIF7Q2M1P5 1343 aa24.21■■□□□ 1.47
MCF2L-226ENST00000486210 LOC102724428A0A0B4J2F2 783 aa24.21■■□□□ 1.47
MCF2L-226ENST00000486210 SIK1P57059 783 aa24.21■■□□□ 1.47
MCF2L-226ENST00000486210 CARD14Q9BXL6 1004 aa24.21■■□□□ 1.47
MCF2L-226ENST00000486210 KIF13BQ9NQT8 1826 aa24.21■■□□□ 1.47
MCF2L-226ENST00000486210 ITPK1Q13572 414 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms