RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PKD1L3Q7Z443 1732 aa15.21■□□□□ 0.03
NUP50-216ENST00000486184 NCAPD2Q15021 1401 aa15.21■□□□□ 0.03
NUP50-216ENST00000486184 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.03
NUP50-216ENST00000486184 DISP2A7MBM2 1401 aa15.2■□□□□ 0.02
NUP50-216ENST00000486184 ONECUT3O60422 494 aaPredicted RBP15.2■□□□□ 0.02
NUP50-216ENST00000486184 U2AF1L5P0DN76 240 aaPredicted RBP15.2■□□□□ 0.02
NUP50-216ENST00000486184 U2AF1Q01081 240 aaKnown RBP eCLIP15.2■□□□□ 0.02
NUP50-216ENST00000486184 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
NUP50-216ENST00000486184 DDB1Q16531 1140 aa15.2■□□□□ 0.02
NUP50-216ENST00000486184 MEGF6O75095 1541 aa15.2■□□□□ 0.02
NUP50-216ENST00000486184 EXOC5O00471 708 aa15.19■□□□□ 0.02
NUP50-216ENST00000486184 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
NUP50-216ENST00000486184 HMOX1P09601 288 aa15.19■□□□□ 0.02
NUP50-216ENST00000486184 PDE3BQ13370 1112 aa15.19■□□□□ 0.02
NUP50-216ENST00000486184 MRS2Q9HD23 443 aa15.19■□□□□ 0.02
NUP50-216ENST00000486184 SHANK3Q9BYB0 1731 aa15.19■□□□□ 0.02
NUP50-216ENST00000486184 OVOS2A0A0G2JMS6 1433 aa15.18■□□□□ 0.02
NUP50-216ENST00000486184 TNS2Q63HR2 1409 aa15.18■□□□□ 0.02
NUP50-216ENST00000486184 NEFMP07197 916 aa15.18■□□□□ 0.02
NUP50-216ENST00000486184 KDRP35968 1356 aa15.17■□□□□ 0.02
NUP50-216ENST00000486184 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
NUP50-216ENST00000486184 PLEKHG2Q9H7P9 1386 aa15.16■□□□□ 0.02
NUP50-216ENST00000486184 KRT27Q7Z3Y8 459 aa15.16■□□□□ 0.02
NUP50-216ENST00000486184 ZCRB1Q8TBF4 217 aaKnown RBP15.16■□□□□ 0.02
NUP50-216ENST00000486184 PNNQ9H307 717 aaKnown RBP15.16■□□□□ 0.02
NUP50-216ENST00000486184 SPG7Q9UQ90 795 aa15.16■□□□□ 0.02
NUP50-216ENST00000486184 VIRMAQ69YN4 1812 aaKnown RBP15.15■□□□□ 0.02
NUP50-216ENST00000486184 KAT6BQ8WYB5 2073 aa15.15■□□□□ 0.02
NUP50-216ENST00000486184 PLEKHO1Q53GL0 409 aaPredicted RBP15.15■□□□□ 0.02
NUP50-216ENST00000486184 FOXD4L1Q9NU39 408 aa15.15■□□□□ 0.02
NUP50-216ENST00000486184 PCDH11XQ9BZA7 1347 aa15.15■□□□□ 0.02
NUP50-216ENST00000486184 PCDH11YQ9BZA8 1340 aa15.15■□□□□ 0.02
NUP50-216ENST00000486184 FCHSD2O94868 740 aa15.14■□□□□ 0.01
NUP50-216ENST00000486184 AMOTQ4VCS5 1084 aa15.14■□□□□ 0.01
NUP50-216ENST00000486184 PRKAR2BP31323 418 aa15.13■□□□□ 0.01
NUP50-216ENST00000486184 DDX54Q8TDD1 881 aaKnown RBP15.13■□□□□ 0.01
NUP50-216ENST00000486184 MAPK8IP3Q9UPT6 1336 aa15.13■□□□□ 0.01
NUP50-216ENST00000486184 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
NUP50-216ENST00000486184 RSPH6AQ9H0K4 717 aa15.12■□□□□ 0.01
NUP50-216ENST00000486184 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.016e-6■□□□□ 8.9
NUP50-216ENST00000486184 SBF2Q86WG5 1849 aa15.12■□□□□ 0.01
NUP50-216ENST00000486184 DLG5Q8TDM6 1919 aa15.11■□□□□ 0.01
NUP50-216ENST00000486184 CCER2I3L3R5 266 aa15.11■□□□□ 0.01
NUP50-216ENST00000486184 CCDC184Q52MB2 194 aa15.11■□□□□ 0.01
NUP50-216ENST00000486184 C1orf141Q5JVX7 400 aa15.11■□□□□ 0.01
NUP50-216ENST00000486184 ZNF530Q6P9A1 599 aaPredicted RBP15.1■□□□□ 0.01
NUP50-216ENST00000486184 MIER1Q8N108 512 aa15.1■□□□□ 0.01
NUP50-216ENST00000486184 FAM182BQ5T319 152 aa15.09■□□□□ 0.01
NUP50-216ENST00000486184 FAM196AQ6ZSG2 479 aa15.09■□□□□ 0.01
NUP50-216ENST00000486184 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
NUP50-216ENST00000486184 MARCH10Q8NA82 808 aaPredicted RBP15.09■□□□□ 0.01
NUP50-216ENST00000486184 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
NUP50-216ENST00000486184 SCN11AQ9UI33 1791 aa15.08■□□□□ 0.01
NUP50-216ENST00000486184 ILDR2Q71H61 639 aa15.08■□□□□ 0
NUP50-216ENST00000486184 ADAMTS8Q9UP79 889 aa15.08■□□□□ 0
NUP50-216ENST00000486184 NHSQ6T4R5 1651 aa15.08■□□□□ 0
NUP50-216ENST00000486184 ITGB4P16144 1822 aa15.08■□□□□ 0
NUP50-216ENST00000486184 HSP90AB1P08238 724 aaKnown RBP15.07■□□□□ 0
NUP50-216ENST00000486184 FAM9BQ8IZU0 186 aa15.07■□□□□ 0
NUP50-216ENST00000486184 CYP27B1O15528 508 aa15.06■□□□□ 0
NUP50-216ENST00000486184 PHKG2P15735 406 aa15.06■□□□□ 0
NUP50-216ENST00000486184 MTHFSDQ2M296 383 aaKnown RBP15.06■□□□□ 0
NUP50-216ENST00000486184 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
NUP50-216ENST00000486184 PNISRQ8TF01 805 aaKnown RBP15.06■□□□□ 0
NUP50-216ENST00000486184 RUNDC1Q96C34 613 aa15.06■□□□□ 0
NUP50-216ENST00000486184 TOGARAM1Q9Y4F4 1720 aa15.06■□□□□ 0
NUP50-216ENST00000486184 AKAP4Q5JQC9 854 aa15.05■□□□□ -0
NUP50-216ENST00000486184 PHACTR3Q96KR7 559 aa15.05■□□□□ -0
NUP50-216ENST00000486184 TNS1Q9HBL0 1735 aaKnown RBP15.04■□□□□ -0
NUP50-216ENST00000486184 BCL9O00512 1426 aa15.04■□□□□ -0
NUP50-216ENST00000486184 MAP3K5Q99683 1374 aa15.04■□□□□ -0
NUP50-216ENST00000486184 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
NUP50-216ENST00000486184 BTAF1O14981 1849 aa15.03■□□□□ -0
NUP50-216ENST00000486184 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
NUP50-216ENST00000486184 SF3B2Q13435 895 aaKnown RBP15.03■□□□□ -0
NUP50-216ENST00000486184 RTF1Q92541 710 aaKnown RBP15.03■□□□□ -0
NUP50-216ENST00000486184 SYTL4Q96C24 671 aaPredicted RBP15.03■□□□□ -0
NUP50-216ENST00000486184 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
NUP50-216ENST00000486184 DCAF5Q96JK2 942 aa15.03■□□□□ -0
NUP50-216ENST00000486184 NFE2L2Q16236 605 aa15.02■□□□□ -0
NUP50-216ENST00000486184 ADAMTS7Q9UKP4 1686 aa15.01□□□□□ -0.01
NUP50-216ENST00000486184 ZBTB22O15209 634 aa15.01□□□□□ -0.01
NUP50-216ENST00000486184 TRIM37O94972 964 aa15.01□□□□□ -0.01
NUP50-216ENST00000486184 NKX1-1Q15270 411 aaPredicted RBP15.01□□□□□ -0.01
NUP50-216ENST00000486184 MPRIPQ6WCQ1 1025 aa15.01□□□□□ -0.01
NUP50-216ENST00000486184 LMOD3Q0VAK6 560 aa15□□□□□ -0.01
NUP50-216ENST00000486184 RNF39Q9H2S5 420 aa15□□□□□ -0.01
NUP50-216ENST00000486184 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
NUP50-216ENST00000486184 RIPK4P57078 832 aa14.99□□□□□ -0.01
NUP50-216ENST00000486184 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
NUP50-216ENST00000486184 CCDC125Q86Z20 511 aa14.99□□□□□ -0.01
NUP50-216ENST00000486184 TMOD3Q9NYL9 352 aa14.99□□□□□ -0.01
NUP50-216ENST00000486184 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
NUP50-216ENST00000486184 ERVV-2B6SEH9 535 aa14.98□□□□□ -0.01
NUP50-216ENST00000486184 RNMTO43148 476 aaKnown RBP14.98□□□□□ -0.01
NUP50-216ENST00000486184 HTATSF1O43719 755 aaKnown RBP14.98□□□□□ -0.01
NUP50-216ENST00000486184 TMPOP42166 694 aaKnown RBP14.98□□□□□ -0.01
NUP50-216ENST00000486184 PRIM1P49642 420 aaKnown RBP14.98□□□□□ -0.01
NUP50-216ENST00000486184 CABP4P57796 275 aa14.98□□□□□ -0.01
NUP50-216ENST00000486184 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms