RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 RRS1Q15050 365 aaKnown RBP10.24□□□□□ -0.77
CPNE1-226ENST00000486021 SYTL4Q96C24 671 aaPredicted RBP10.24□□□□□ -0.77
CPNE1-226ENST00000486021 ACSBG1Q96GR2 724 aa10.24□□□□□ -0.77
CPNE1-226ENST00000486021 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
CPNE1-226ENST00000486021 PPM1GO15355 546 aaPredicted RBP10.23□□□□□ -0.77
CPNE1-226ENST00000486021 SLC15A2Q16348 729 aa10.23□□□□□ -0.77
CPNE1-226ENST00000486021 KNSTRNQ9Y448 316 aa10.23□□□□□ -0.77
CPNE1-226ENST00000486021 LY75O60449 1722 aa10.23□□□□□ -0.77
CPNE1-226ENST00000486021 PLEKHG2Q9H7P9 1386 aa10.23□□□□□ -0.77
CPNE1-226ENST00000486021 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
CPNE1-226ENST00000486021 SLC16A10Q8TF71 515 aa10.22□□□□□ -0.77
CPNE1-226ENST00000486021 WASHC2AQ641Q2 1341 aa10.22□□□□□ -0.77
CPNE1-226ENST00000486021 SHANK3Q9BYB0 1731 aa10.21□□□□□ -0.77
CPNE1-226ENST00000486021 CASZ1Q86V15 1759 aa10.21□□□□□ -0.77
CPNE1-226ENST00000486021 ITGB4P16144 1822 aa10.21□□□□□ -0.77
CPNE1-226ENST00000486021 NBPF6Q5VWK0 638 aa10.21□□□□□ -0.77
CPNE1-226ENST00000486021 SMARCC1Q92922 1105 aaPredicted RBP10.21□□□□□ -0.77
CPNE1-226ENST00000486021 NBPF4Q96M43 638 aa10.21□□□□□ -0.77
CPNE1-226ENST00000486021 PKD1L3Q7Z443 1732 aa10.21□□□□□ -0.78
CPNE1-226ENST00000486021 FLAD1Q8NFF5 587 aa10.2□□□□□ -0.78
CPNE1-226ENST00000486021 MTFR1LQ9H019 292 aa10.2□□□□□ -0.78
CPNE1-226ENST00000486021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.2□□□□□ -0.78
CPNE1-226ENST00000486021 HSP90AB1P08238 724 aaKnown RBP10.19□□□□□ -0.78
CPNE1-226ENST00000486021 POLD1P28340 1107 aa10.19□□□□□ -0.78
CPNE1-226ENST00000486021 HSP90AB2PQ58FF8 381 aa10.19□□□□□ -0.78
CPNE1-226ENST00000486021 MORC1Q86VD1 984 aa10.19□□□□□ -0.78
CPNE1-226ENST00000486021 CARD14Q9BXL6 1004 aa10.19□□□□□ -0.78
CPNE1-226ENST00000486021 CHD4Q14839 1912 aa10.18□□□□□ -0.78
CPNE1-226ENST00000486021 PRIM1P49642 420 aaKnown RBP10.18□□□□□ -0.78
CPNE1-226ENST00000486021 IFNL2Q8IZJ0 200 aa10.18□□□□□ -0.78
CPNE1-226ENST00000486021 PANK3Q9H999 370 aa10.18□□□□□ -0.78
CPNE1-226ENST00000486021 TFCP2L1Q9NZI6 479 aa10.18□□□□□ -0.78
CPNE1-226ENST00000486021 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
CPNE1-226ENST00000486021 AMOTQ4VCS5 1084 aa10.17□□□□□ -0.78
CPNE1-226ENST00000486021 PROM2Q8N271 834 aa10.17□□□□□ -0.78
CPNE1-226ENST00000486021 CCNL1Q9UK58 526 aaPredicted RBP10.17□□□□□ -0.78
CPNE1-226ENST00000486021 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
CPNE1-226ENST00000486021 C5P01031 1676 aa10.17□□□□□ -0.78
CPNE1-226ENST00000486021 MEGF6O75095 1541 aa10.17□□□□□ -0.78
CPNE1-226ENST00000486021 PAPPAQ13219 1627 aa10.16□□□□□ -0.78
CPNE1-226ENST00000486021 FBLN1P23142 703 aa10.16□□□□□ -0.78
CPNE1-226ENST00000486021 PLEKHO1Q53GL0 409 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-226ENST00000486021 USHBP1Q8N6Y0 703 aa10.16□□□□□ -0.78
CPNE1-226ENST00000486021 POLKQ9UBT6 870 aa10.16□□□□□ -0.78
CPNE1-226ENST00000486021 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
CPNE1-226ENST00000486021 TMOD3Q9NYL9 352 aa10.15□□□□□ -0.78
CPNE1-226ENST00000486021 MSH5O43196 834 aa10.14□□□□□ -0.79
CPNE1-226ENST00000486021 ZBTB7AO95365 584 aa10.14□□□□□ -0.79
CPNE1-226ENST00000486021 TNNT2P45379 298 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-226ENST00000486021 NKX1-1Q15270 411 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-226ENST00000486021 C1orf141Q5JVX7 400 aa10.14□□□□□ -0.79
CPNE1-226ENST00000486021 MPRIPQ6WCQ1 1025 aa10.14□□□□□ -0.79
CPNE1-226ENST00000486021 PTF1AQ7RTS3 328 aa10.14□□□□□ -0.79
CPNE1-226ENST00000486021 EYA1Q99502 592 aa10.14□□□□□ -0.79
CPNE1-226ENST00000486021 ATF5Q9Y2D1 282 aaPredicted RBP10.14□□□□□ -0.79
CPNE1-226ENST00000486021 NCAPD2Q15021 1401 aa10.14□□□□□ -0.79
CPNE1-226ENST00000486021 VIRMAQ69YN4 1812 aaKnown RBP10.14□□□□□ -0.79
CPNE1-226ENST00000486021 TUBGCP6Q96RT7 1819 aa10.14□□□□□ -0.79
CPNE1-226ENST00000486021 ARXQ96QS3 562 aa10.13□□□□□ -0.79
CPNE1-226ENST00000486021 COL24A1Q17RW2 1714 aa10.13□□□□□ -0.79
CPNE1-226ENST00000486021 AKT1S1Q96B36 256 aa10.12□□□□□ -0.79
CPNE1-226ENST00000486021 DCAF5Q96JK2 942 aa10.12□□□□□ -0.79
CPNE1-226ENST00000486021 AK7Q96M32 723 aa10.12□□□□□ -0.79
CPNE1-226ENST00000486021 PALLDQ8WX93 1383 aa10.12□□□□□ -0.79
CPNE1-226ENST00000486021 ZNF831Q5JPB2 1677 aa10.12□□□□□ -0.79
CPNE1-226ENST00000486021 ERVV-2B6SEH9 535 aa10.11□□□□□ -0.79
CPNE1-226ENST00000486021 EIF4A2Q14240 407 aaKnown RBP10.11□□□□□ -0.79
CPNE1-226ENST00000486021 LRRC4BQ9NT99 713 aa10.11□□□□□ -0.79
CPNE1-226ENST00000486021 C4BP0C0L5 1744 aa10.1□□□□□ -0.79
CPNE1-226ENST00000486021 IGSF1Q8N6C5 1336 aa10.1□□□□□ -0.79
CPNE1-226ENST00000486021 CYP27B1O15528 508 aa10.1□□□□□ -0.79
CPNE1-226ENST00000486021 PHKG2P15735 406 aa10.1□□□□□ -0.79
CPNE1-226ENST00000486021 YY1P25490 414 aa10.1□□□□□ -0.79
CPNE1-226ENST00000486021 MAP3K5Q99683 1374 aa10.1□□□□□ -0.79
CPNE1-226ENST00000486021 TOGARAM1Q9Y4F4 1720 aa10.1□□□□□ -0.79
CPNE1-226ENST00000486021 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
CPNE1-226ENST00000486021 UBR3Q6ZT12 1888 aa10.09□□□□□ -0.79
CPNE1-226ENST00000486021 CABP4P57796 275 aa10.09□□□□□ -0.79
CPNE1-226ENST00000486021 CFAP53Q96M91 514 aa10.09□□□□□ -0.79
CPNE1-226ENST00000486021 SYT17Q9BSW7 474 aa10.09□□□□□ -0.79
CPNE1-226ENST00000486021 KIF7Q2M1P5 1343 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 PNPLA7Q6ZV29 1317 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 SSFA2P28290 1259 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 PTGER2P43116 358 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 MTHFSP49914 203 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 ZNF827Q17R98 1081 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 ZNF530Q6P9A1 599 aaPredicted RBP10.08□□□□□ -0.8
CPNE1-226ENST00000486021 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 FHDC1Q9C0D6 1143 aaPredicted RBP10.08□□□□□ -0.8
CPNE1-226ENST00000486021 NPC1L1Q9UHC9 1359 aa10.08□□□□□ -0.8
CPNE1-226ENST00000486021 LOC102724428A0A0B4J2F2 783 aa10.07□□□□□ -0.8
CPNE1-226ENST00000486021 DIAPH1O60610 1272 aaKnown RBP10.07□□□□□ -0.8
CPNE1-226ENST00000486021 NEFMP07197 916 aa10.07□□□□□ -0.8
CPNE1-226ENST00000486021 SIK1P57059 783 aa10.07□□□□□ -0.8
CPNE1-226ENST00000486021 GPR162Q16538 588 aa10.07□□□□□ -0.8
CPNE1-226ENST00000486021 PIGBQ92521 554 aa10.07□□□□□ -0.8
CPNE1-226ENST00000486021 NUDCQ9Y266 331 aa10.07□□□□□ -0.8
CPNE1-226ENST00000486021 GRIN3BO60391 1043 aa10.06□□□□□ -0.8
CPNE1-226ENST00000486021 AKAP4Q5JQC9 854 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms