RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 EYA1Q99502 592 aa20.49■□□□□ 0.87
YIF1A-208ENST00000485820 PROM2Q8N271 834 aa20.48■□□□□ 0.87
YIF1A-208ENST00000485820 RREB1Q92766 1687 aa20.48■□□□□ 0.87
YIF1A-208ENST00000485820 SHANK3Q9BYB0 1731 aa20.47■□□□□ 0.87
YIF1A-208ENST00000485820 NCAPD2Q15021 1401 aa20.47■□□□□ 0.87
YIF1A-208ENST00000485820 PSDA5PKW4 1024 aaPredicted RBP20.47■□□□□ 0.87
YIF1A-208ENST00000485820 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
YIF1A-208ENST00000485820 EIF4A2Q14240 407 aaKnown RBP20.47■□□□□ 0.87
YIF1A-208ENST00000485820 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
YIF1A-208ENST00000485820 RGPD3A6NKT7 1758 aaPredicted RBP20.45■□□□□ 0.86
YIF1A-208ENST00000485820 RGPD4Q7Z3J3 1758 aa20.45■□□□□ 0.86
YIF1A-208ENST00000485820 NUP188Q5SRE5 1749 aa20.44■□□□□ 0.86
YIF1A-208ENST00000485820 R3HDM1Q15032 1099 aaKnown RBP20.44■□□□□ 0.86
YIF1A-208ENST00000485820 PRIM1P49642 420 aaKnown RBP20.42■□□□□ 0.86
YIF1A-208ENST00000485820 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
YIF1A-208ENST00000485820 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
YIF1A-208ENST00000485820 NBPF14Q5TI25 921 aa20.41■□□□□ 0.86
YIF1A-208ENST00000485820 NPC1L1Q9UHC9 1359 aa20.41■□□□□ 0.86
YIF1A-208ENST00000485820 BTAF1O14981 1849 aa20.41■□□□□ 0.86
YIF1A-208ENST00000485820 CYP27B1O15528 508 aa20.4■□□□□ 0.86
YIF1A-208ENST00000485820 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.85
YIF1A-208ENST00000485820 MTHFSP49914 203 aa20.39■□□□□ 0.85
YIF1A-208ENST00000485820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.39■□□□□ 0.85
YIF1A-208ENST00000485820 PCDH11XQ9BZA7 1347 aa20.38■□□□□ 0.85
YIF1A-208ENST00000485820 PCDH11YQ9BZA8 1340 aa20.38■□□□□ 0.85
YIF1A-208ENST00000485820 PKD1L3Q7Z443 1732 aa20.37■□□□□ 0.85
YIF1A-208ENST00000485820 IL13P35225 146 aa20.37■□□□□ 0.85
YIF1A-208ENST00000485820 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
YIF1A-208ENST00000485820 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
YIF1A-208ENST00000485820 SYTL4Q96C24 671 aaPredicted RBP20.36■□□□□ 0.85
YIF1A-208ENST00000485820 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
YIF1A-208ENST00000485820 ANO8Q9HCE9 1232 aaPredicted RBP20.35■□□□□ 0.85
YIF1A-208ENST00000485820 SRCAPQ6ZRS2 3230 aa20.34■□□□□ 0.85
YIF1A-208ENST00000485820 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
YIF1A-208ENST00000485820 LRRC4BQ9NT99 713 aa20.33■□□□□ 0.85
YIF1A-208ENST00000485820 AEBP1Q8IUX7 1158 aa20.32■□□□□ 0.84
YIF1A-208ENST00000485820 SULT6B1Q6IMI4 303 aa20.31■□□□□ 0.84
YIF1A-208ENST00000485820 ITGB4P16144 1822 aa20.3■□□□□ 0.84
YIF1A-208ENST00000485820 PHKG2P15735 406 aa20.3■□□□□ 0.84
YIF1A-208ENST00000485820 IFNL2Q8IZJ0 200 aa20.3■□□□□ 0.84
YIF1A-208ENST00000485820 PLEKHG2Q9H7P9 1386 aa20.3■□□□□ 0.84
YIF1A-208ENST00000485820 SLC15A2Q16348 729 aa20.29■□□□□ 0.84
YIF1A-208ENST00000485820 SLC27A3Q5K4L6 730 aa20.29■□□□□ 0.84
YIF1A-208ENST00000485820 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
YIF1A-208ENST00000485820 MPRIPQ6WCQ1 1025 aa20.28■□□□□ 0.84
YIF1A-208ENST00000485820 STK32BQ9NY57 414 aa20.28■□□□□ 0.84
YIF1A-208ENST00000485820 KDRP35968 1356 aa20.28■□□□□ 0.84
YIF1A-208ENST00000485820 LRP5O75197 1615 aa20.27■□□□□ 0.84
YIF1A-208ENST00000485820 LY75O60449 1722 aa20.27■□□□□ 0.84
YIF1A-208ENST00000485820 TOGARAM1Q9Y4F4 1720 aa20.27■□□□□ 0.84
YIF1A-208ENST00000485820 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
YIF1A-208ENST00000485820 KCNQ4P56696 695 aa20.27■□□□□ 0.84
YIF1A-208ENST00000485820 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.84
YIF1A-208ENST00000485820 PDGFDQ9GZP0 370 aaPredicted RBP20.27■□□□□ 0.84
YIF1A-208ENST00000485820 PIGBQ92521 554 aa20.26■□□□□ 0.83
YIF1A-208ENST00000485820 PAPPAQ13219 1627 aa20.25■□□□□ 0.83
YIF1A-208ENST00000485820 AKT1S1Q96B36 256 aa20.24■□□□□ 0.83
YIF1A-208ENST00000485820 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
YIF1A-208ENST00000485820 COL3A1P02461 1466 aaPredicted RBP20.23■□□□□ 0.83
YIF1A-208ENST00000485820 CASZ1Q86V15 1759 aa20.22■□□□□ 0.83
YIF1A-208ENST00000485820 HMOX1P09601 288 aa20.22■□□□□ 0.83
YIF1A-208ENST00000485820 PPP2R1AP30153 589 aa20.22■□□□□ 0.83
YIF1A-208ENST00000485820 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
YIF1A-208ENST00000485820 CCNL1Q9UK58 526 aaPredicted RBP20.22■□□□□ 0.83
YIF1A-208ENST00000485820 HSP90AB1P08238 724 aaKnown RBP20.21■□□□□ 0.83
YIF1A-208ENST00000485820 DCAF5Q96JK2 942 aa20.21■□□□□ 0.83
YIF1A-208ENST00000485820 ERVV-2B6SEH9 535 aa20.2■□□□□ 0.82
YIF1A-208ENST00000485820 SMARCC1Q92922 1105 aaPredicted RBP20.2■□□□□ 0.82
YIF1A-208ENST00000485820 SPON1Q9HCB6 807 aa20.2■□□□□ 0.82
YIF1A-208ENST00000485820 TMOD3Q9NYL9 352 aa20.2■□□□□ 0.82
YIF1A-208ENST00000485820 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
YIF1A-208ENST00000485820 ASAP1Q9ULH1 1129 aa20.19■□□□□ 0.82
YIF1A-208ENST00000485820 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
YIF1A-208ENST00000485820 ATG3Q9NT62 314 aa20.17■□□□□ 0.82
YIF1A-208ENST00000485820 KDM6AO15550 1401 aaPredicted RBP20.17■□□□□ 0.82
YIF1A-208ENST00000485820 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
YIF1A-208ENST00000485820 ZBTB7AO95365 584 aa20.16■□□□□ 0.82
YIF1A-208ENST00000485820 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
YIF1A-208ENST00000485820 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
YIF1A-208ENST00000485820 TAF1LQ8IZX4 1826 aa20.16■□□□□ 0.82
YIF1A-208ENST00000485820 MTHFSDQ2M296 383 aaKnown RBP20.15■□□□□ 0.82
YIF1A-208ENST00000485820 AKAP4Q5JQC9 854 aa20.15■□□□□ 0.82
YIF1A-208ENST00000485820 ATF5Q9Y2D1 282 aaPredicted RBP20.15■□□□□ 0.82
YIF1A-208ENST00000485820 QSER1Q2KHR3 1735 aa20.14■□□□□ 0.81
YIF1A-208ENST00000485820 PNPLA7Q6ZV29 1317 aa20.14■□□□□ 0.81
YIF1A-208ENST00000485820 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.81
YIF1A-208ENST00000485820 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
YIF1A-208ENST00000485820 LOC102724428A0A0B4J2F2 783 aa20.13■□□□□ 0.81
YIF1A-208ENST00000485820 PTGER2P43116 358 aa20.13■□□□□ 0.81
YIF1A-208ENST00000485820 SIK1P57059 783 aa20.13■□□□□ 0.81
YIF1A-208ENST00000485820 CABP4P57796 275 aa20.13■□□□□ 0.81
YIF1A-208ENST00000485820 MTFR1LQ9H019 292 aa20.13■□□□□ 0.81
YIF1A-208ENST00000485820 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
YIF1A-208ENST00000485820 TUBGCP6Q96RT7 1819 aa20.13■□□□□ 0.81
YIF1A-208ENST00000485820 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
YIF1A-208ENST00000485820 HMGB2P26583 209 aaKnown RBP20.12■□□□□ 0.81
YIF1A-208ENST00000485820 NFATC2IPQ8NCF5 419 aa20.12■□□□□ 0.81
YIF1A-208ENST00000485820 C5P01031 1676 aa20.12■□□□□ 0.81
YIF1A-208ENST00000485820 SGIP1Q9BQI5 828 aa20.11■□□□□ 0.81
YIF1A-208ENST00000485820 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms