RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 RAPGEF4Q8WZA2 1011 aa24.7■■□□□ 1.54
ERCC2-205ENST00000485403 PKD1L3Q7Z443 1732 aa24.69■■□□□ 1.54
ERCC2-205ENST00000485403 EXOC5O00471 708 aa24.68■■□□□ 1.54
ERCC2-205ENST00000485403 PDE3BQ13370 1112 aa24.68■■□□□ 1.54
ERCC2-205ENST00000485403 FAM9BQ8IZU0 186 aa24.68■■□□□ 1.54
ERCC2-205ENST00000485403 PNISRQ8TF01 805 aaKnown RBP24.68■■□□□ 1.54
ERCC2-205ENST00000485403 TATP17735 454 aaPredicted RBP24.66■■□□□ 1.54
ERCC2-205ENST00000485403 AEBP1Q8IUX7 1158 aa24.66■■□□□ 1.54
ERCC2-205ENST00000485403 SULT6B1Q6IMI4 303 aa24.65■■□□□ 1.54
ERCC2-205ENST00000485403 MARCH10Q8NA82 808 aaPredicted RBP24.64■■□□□ 1.53
ERCC2-205ENST00000485403 BCL9O00512 1426 aa24.63■■□□□ 1.53
ERCC2-205ENST00000485403 ZCRB1Q8TBF4 217 aaKnown RBP24.63■■□□□ 1.53
ERCC2-205ENST00000485403 WDR43Q15061 677 aaKnown RBP eCLIP24.62■■□□□ 1.534e-9■■■■■ 77.9
ERCC2-205ENST00000485403 FAM182BQ5T319 152 aa24.62■■□□□ 1.53
ERCC2-205ENST00000485403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.62■■□□□ 1.53
ERCC2-205ENST00000485403 NUDCQ9Y266 331 aa24.62■■□□□ 1.53
ERCC2-205ENST00000485403 SBF2Q86WG5 1849 aa24.61■■□□□ 1.53
ERCC2-205ENST00000485403 U2SURPO15042 1029 aaKnown RBP24.61■■□□□ 1.53
ERCC2-205ENST00000485403 FAM196AQ6ZSG2 479 aa24.6■■□□□ 1.53
ERCC2-205ENST00000485403 HMOX1P09601 288 aa24.59■■□□□ 1.53
ERCC2-205ENST00000485403 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
ERCC2-205ENST00000485403 PCDH11XQ9BZA7 1347 aa24.58■■□□□ 1.53
ERCC2-205ENST00000485403 PCDH11YQ9BZA8 1340 aa24.58■■□□□ 1.53
ERCC2-205ENST00000485403 SOCS7O14512 581 aa24.57■■□□□ 1.52
ERCC2-205ENST00000485403 KAT6BQ8WYB5 2073 aa24.57■■□□□ 1.52
ERCC2-205ENST00000485403 SPG7Q9UQ90 795 aa24.56■■□□□ 1.52
ERCC2-205ENST00000485403 CYP27B1O15528 508 aa24.56■■□□□ 1.52
ERCC2-205ENST00000485403 U2AF1L5P0DN76 240 aaPredicted RBP24.56■■□□□ 1.52
ERCC2-205ENST00000485403 U2AF1Q01081 240 aaKnown RBP eCLIP24.56■■□□□ 1.52
ERCC2-205ENST00000485403 DDX54Q8TDD1 881 aaKnown RBP24.56■■□□□ 1.52
ERCC2-205ENST00000485403 ADAMTS8Q9UP79 889 aa24.56■■□□□ 1.52
ERCC2-205ENST00000485403 AMOTQ4VCS5 1084 aa24.55■■□□□ 1.52
ERCC2-205ENST00000485403 UPF1Q92900 1129 aaKnown RBP eCLIP24.55■■□□□ 1.52
ERCC2-205ENST00000485403 RSPH6AQ9H0K4 717 aa24.55■■□□□ 1.52
ERCC2-205ENST00000485403 PLEKHO1Q53GL0 409 aaPredicted RBP24.54■■□□□ 1.52
ERCC2-205ENST00000485403 FCHSD2O94868 740 aa24.53■■□□□ 1.52
ERCC2-205ENST00000485403 TNS1Q9HBL0 1735 aaKnown RBP24.53■■□□□ 1.52
ERCC2-205ENST00000485403 NHSQ6T4R5 1651 aa24.51■■□□□ 1.51
ERCC2-205ENST00000485403 DOT1LQ8TEK3 1739 aa24.5■■□□□ 1.51
ERCC2-205ENST00000485403 PHKG2P15735 406 aa24.5■■□□□ 1.51
ERCC2-205ENST00000485403 PRKAR2BP31323 418 aa24.5■■□□□ 1.51
ERCC2-205ENST00000485403 NKX1-1Q15270 411 aaPredicted RBP24.5■■□□□ 1.51
ERCC2-205ENST00000485403 CCDC125Q86Z20 511 aa24.5■■□□□ 1.51
ERCC2-205ENST00000485403 IFNL2Q8IZJ0 200 aa24.49■■□□□ 1.51
ERCC2-205ENST00000485403 TOGARAM1Q9Y4F4 1720 aa24.48■■□□□ 1.51
ERCC2-205ENST00000485403 TRIM37O94972 964 aa24.47■■□□□ 1.51
ERCC2-205ENST00000485403 ZNF530Q6P9A1 599 aaPredicted RBP24.47■■□□□ 1.51
ERCC2-205ENST00000485403 MTHFSDQ2M296 383 aaKnown RBP24.45■■□□□ 1.51
ERCC2-205ENST00000485403 PHACTR3Q96KR7 559 aa24.45■■□□□ 1.51
ERCC2-205ENST00000485403 HNRNPUQ00839 825 aaKnown RBP eCLIP24.45■■□□□ 1.5
ERCC2-205ENST00000485403 PLEKHF1Q96S99 279 aa24.45■■□□□ 1.5
ERCC2-205ENST00000485403 BCL11BQ9C0K0 894 aaPredicted RBP24.45■■□□□ 1.5
ERCC2-205ENST00000485403 ITGB4P16144 1822 aa24.44■■□□□ 1.5
ERCC2-205ENST00000485403 VIRMAQ69YN4 1812 aaKnown RBP24.44■■□□□ 1.5
ERCC2-205ENST00000485403 SCN11AQ9UI33 1791 aa24.43■■□□□ 1.5
ERCC2-205ENST00000485403 PTF1AQ7RTS3 328 aa24.43■■□□□ 1.5
ERCC2-205ENST00000485403 CCDC146Q8IYE0 955 aa24.43■■□□□ 1.5
ERCC2-205ENST00000485403 ACSBG1Q96GR2 724 aa24.43■■□□□ 1.5
ERCC2-205ENST00000485403 BTAF1O14981 1849 aa24.43■■□□□ 1.5
ERCC2-205ENST00000485403 ADAMTS7Q9UKP4 1686 aa24.43■■□□□ 1.5
ERCC2-205ENST00000485403 KCNQ2O43526 872 aa24.42■■□□□ 1.5
ERCC2-205ENST00000485403 HSP90AB1P08238 724 aaKnown RBP24.42■■□□□ 1.5
ERCC2-205ENST00000485403 AKAP4Q5JQC9 854 aa24.42■■□□□ 1.5
ERCC2-205ENST00000485403 C1orf141Q5JVX7 400 aa24.42■■□□□ 1.5
ERCC2-205ENST00000485403 GAS2L2Q8NHY3 880 aa24.42■■□□□ 1.5
ERCC2-205ENST00000485403 KDM6AO15550 1401 aaPredicted RBP24.42■■□□□ 1.5
ERCC2-205ENST00000485403 PNNQ9H307 717 aaKnown RBP24.41■■□□□ 1.5
ERCC2-205ENST00000485403 DCAF5Q96JK2 942 aa24.4■■□□□ 1.5
ERCC2-205ENST00000485403 RGPD3A6NKT7 1758 aaPredicted RBP24.4■■□□□ 1.5
ERCC2-205ENST00000485403 RGPD4Q7Z3J3 1758 aa24.4■■□□□ 1.5
ERCC2-205ENST00000485403 PRIM1P49642 420 aaKnown RBP24.4■■□□□ 1.5
ERCC2-205ENST00000485403 SF3B2Q13435 895 aaKnown RBP24.4■■□□□ 1.5
ERCC2-205ENST00000485403 RUNDC1Q96C34 613 aa24.39■■□□□ 1.49
ERCC2-205ENST00000485403 DLG5Q8TDM6 1919 aa24.39■■□□□ 1.49
ERCC2-205ENST00000485403 MAP3K5Q99683 1374 aa24.37■■□□□ 1.49
ERCC2-205ENST00000485403 SENP3-EIF4A1A0A087X0R7 540 aa24.36■■□□□ 1.49
ERCC2-205ENST00000485403 ERVV-2B6SEH9 535 aa24.35■■□□□ 1.49
ERCC2-205ENST00000485403 APBA3O96018 575 aa24.35■■□□□ 1.49
ERCC2-205ENST00000485403 NEFMP07197 916 aa24.35■■□□□ 1.49
ERCC2-205ENST00000485403 MPRIPQ6WCQ1 1025 aa24.35■■□□□ 1.49
ERCC2-205ENST00000485403 GNAT3A8MTJ3 354 aa24.35■■□□□ 1.49
ERCC2-205ENST00000485403 BAG6P46379 1132 aa24.35■■□□□ 1.49
ERCC2-205ENST00000485403 DEFB132Q7Z7B7 95 aa24.35■■□□□ 1.49
ERCC2-205ENST00000485403 SYTL4Q96C24 671 aaPredicted RBP24.35■■□□□ 1.49
ERCC2-205ENST00000485403 MRC1P22897 1456 aa24.34■■□□□ 1.49
ERCC2-205ENST00000485403 APAF1O14727 1248 aa24.34■■□□□ 1.49
ERCC2-205ENST00000485403 PLSCR1O15162 318 aa24.34■■□□□ 1.49
ERCC2-205ENST00000485403 MAPK8IP3Q9UPT6 1336 aa24.34■■□□□ 1.49
ERCC2-205ENST00000485403 RNMTO43148 476 aaKnown RBP24.32■■□□□ 1.48
ERCC2-205ENST00000485403 LGR6Q9HBX8 967 aa24.32■■□□□ 1.48
ERCC2-205ENST00000485403 EN1Q05925 392 aaPredicted RBP24.31■■□□□ 1.48
ERCC2-205ENST00000485403 NFE2L2Q16236 605 aa24.31■■□□□ 1.48
ERCC2-205ENST00000485403 PIGBQ92521 554 aa24.31■■□□□ 1.48
ERCC2-205ENST00000485403 CAMKK2Q96RR4 588 aa24.31■■□□□ 1.48
ERCC2-205ENST00000485403 LY75O60449 1722 aa24.3■■□□□ 1.48
ERCC2-205ENST00000485403 CEMIPQ8WUJ3 1361 aa24.3■■□□□ 1.48
ERCC2-205ENST00000485403 RREB1Q92766 1687 aa24.3■■□□□ 1.48
ERCC2-205ENST00000485403 TMOD3Q9NYL9 352 aa24.3■■□□□ 1.48
ERCC2-205ENST00000485403 SALL2Q9Y467 1007 aaPredicted RBP24.3■■□□□ 1.48
ERCC2-205ENST00000485403 ZBED9Q6R2W3 1325 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms