RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 HDLBPQ00341 1268 aaKnown RBP13.54□□□□□ -0.24
TTC3-218ENST00000484047 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
TTC3-218ENST00000484047 SPATA32Q96LK8 384 aa13.54□□□□□ -0.24
TTC3-218ENST00000484047 SCUBE2Q9NQ36 999 aa13.54□□□□□ -0.24
TTC3-218ENST00000484047 NR1I2O75469 434 aa13.53□□□□□ -0.24
TTC3-218ENST00000484047 MSS51Q4VC12 460 aa13.53□□□□□ -0.24
TTC3-218ENST00000484047 PCDHB3Q9Y5E6 796 aa13.53□□□□□ -0.24
TTC3-218ENST00000484047 NAA30Q147X3 362 aaPredicted RBP13.52□□□□□ -0.24
TTC3-218ENST00000484047 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.24
TTC3-218ENST00000484047 MMP16P51512 607 aa13.52□□□□□ -0.25
TTC3-218ENST00000484047 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
TTC3-218ENST00000484047 MAGEB6P1A0A0J9YX57 407 aa13.51□□□□□ -0.25
TTC3-218ENST00000484047 SNPHO15079 494 aa13.51□□□□□ -0.25
TTC3-218ENST00000484047 TMC7Q7Z402 723 aa13.51□□□□□ -0.25
TTC3-218ENST00000484047 SH3RF1Q7Z6J0 888 aa13.5□□□□□ -0.25
TTC3-218ENST00000484047 UNC93B1Q9H1C4 597 aa13.5□□□□□ -0.25
TTC3-218ENST00000484047 SCAMP3O14828 347 aaKnown RBP13.49□□□□□ -0.25
TTC3-218ENST00000484047 PTCRAQ6ISU1 281 aaPredicted RBP13.49□□□□□ -0.25
TTC3-218ENST00000484047 MRPL50Q8N5N7 158 aaKnown RBP13.49□□□□□ -0.25
TTC3-218ENST00000484047 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
TTC3-218ENST00000484047 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
TTC3-218ENST00000484047 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
TTC3-218ENST00000484047 RAD51AP2Q09MP3 1159 aa13.47□□□□□ -0.25
TTC3-218ENST00000484047 USP4Q13107 963 aa13.47□□□□□ -0.25
TTC3-218ENST00000484047 PIK3R5Q8WYR1 880 aa13.47□□□□□ -0.25
TTC3-218ENST00000484047 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
TTC3-218ENST00000484047 SPSB2Q99619 263 aa13.47□□□□□ -0.25
TTC3-218ENST00000484047 RBCK1Q9BYM8 510 aa13.47□□□□□ -0.25
TTC3-218ENST00000484047 PPP4CP60510 307 aa13.46□□□□□ -0.25
TTC3-218ENST00000484047 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
TTC3-218ENST00000484047 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
TTC3-218ENST00000484047 NPR3P17342 541 aa13.45□□□□□ -0.26
TTC3-218ENST00000484047 CANXP27824 592 aaKnown RBP13.45□□□□□ -0.26
TTC3-218ENST00000484047 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
TTC3-218ENST00000484047 PCDHB11Q9Y5F2 797 aa13.45□□□□□ -0.26
TTC3-218ENST00000484047 ERBB3P21860 1342 aa13.45□□□□□ -0.26
TTC3-218ENST00000484047 M0R2N6 131 aa13.44□□□□□ -0.26
TTC3-218ENST00000484047 PBX2P40425 430 aa13.44□□□□□ -0.26
TTC3-218ENST00000484047 RNF20Q5VTR2 975 aa13.44□□□□□ -0.26
TTC3-218ENST00000484047 COL26A1Q96A83 441 aa13.44□□□□□ -0.26
TTC3-218ENST00000484047 RNF19AQ9NV58 838 aa13.44□□□□□ -0.26
TTC3-218ENST00000484047 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
TTC3-218ENST00000484047 TREHO43280 583 aa13.43□□□□□ -0.26
TTC3-218ENST00000484047 FMR1Q06787 632 aaKnown RBP eCLIP13.43□□□□□ -0.26
TTC3-218ENST00000484047 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
TTC3-218ENST00000484047 MPSTP25325 297 aa13.43□□□□□ -0.26
TTC3-218ENST00000484047 C4orf48Q5BLP8 95 aa13.43□□□□□ -0.26
TTC3-218ENST00000484047 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
TTC3-218ENST00000484047 FAM13AO94988 1023 aa13.42□□□□□ -0.26
TTC3-218ENST00000484047 MAMSTRQ6ZN01 415 aa13.42□□□□□ -0.26
TTC3-218ENST00000484047 METTL16Q86W50 562 aaKnown RBP13.42□□□□□ -0.26
TTC3-218ENST00000484047 BCAMP50895 628 aa13.41□□□□□ -0.26
TTC3-218ENST00000484047 GIMAP6Q6P9H5 292 aa13.41□□□□□ -0.26
TTC3-218ENST00000484047 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
TTC3-218ENST00000484047 NT5DC4Q86YG4 428 aa13.4□□□□□ -0.26
TTC3-218ENST00000484047 FOXJ1Q92949 421 aa13.4□□□□□ -0.26
TTC3-218ENST00000484047 ZNF358Q9NW07 568 aa13.4□□□□□ -0.26
TTC3-218ENST00000484047 ESPNB1AK53 854 aa13.39□□□□□ -0.27
TTC3-218ENST00000484047 NBPF20Q3BBV1 942 aa13.39□□□□□ -0.27
TTC3-218ENST00000484047 TMEM87AQ8NBN3 555 aa13.39□□□□□ -0.27
TTC3-218ENST00000484047 PARP2Q9UGN5 583 aa13.39□□□□□ -0.27
TTC3-218ENST00000484047 SOWAHBA6NEL2 793 aa13.39□□□□□ -0.27
TTC3-218ENST00000484047 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
TTC3-218ENST00000484047 IGFBP4P22692 258 aa13.38□□□□□ -0.27
TTC3-218ENST00000484047 DSC3Q14574 896 aa13.38□□□□□ -0.27
TTC3-218ENST00000484047 BAP1Q92560 729 aa13.38□□□□□ -0.27
TTC3-218ENST00000484047 SLC10A4Q96EP9 437 aa13.38□□□□□ -0.27
TTC3-218ENST00000484047 SAP130Q9H0E3 1048 aa13.38□□□□□ -0.27
TTC3-218ENST00000484047 NDUFB5O43674 189 aa13.37□□□□□ -0.27
TTC3-218ENST00000484047 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
TTC3-218ENST00000484047 AGERQ15109 404 aa13.37□□□□□ -0.27
TTC3-218ENST00000484047 BPHLQ86WA6 291 aaPredicted RBP13.37□□□□□ -0.27
TTC3-218ENST00000484047 DUSP9Q99956 384 aaKnown RBP13.37□□□□□ -0.27
TTC3-218ENST00000484047 TINF2Q9BSI4 451 aa13.37□□□□□ -0.27
TTC3-218ENST00000484047 TMEM229AB2RXF0 380 aa13.36□□□□□ -0.27
TTC3-218ENST00000484047 TK2O00142 265 aa13.36□□□□□ -0.27
TTC3-218ENST00000484047 FOXO3O43524 673 aa13.36□□□□□ -0.27
TTC3-218ENST00000484047 MAPK8P45983 427 aa13.36□□□□□ -0.27
TTC3-218ENST00000484047 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
TTC3-218ENST00000484047 SCG3Q8WXD2 468 aaKnown RBP13.36□□□□□ -0.27
TTC3-218ENST00000484047 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
TTC3-218ENST00000484047 TSR3Q9UJK0 312 aaKnown RBP13.36□□□□□ -0.27
TTC3-218ENST00000484047 IGHA2P01877 340 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 SCTRP47872 440 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 LINC01559Q495D7 138 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 ANKK1Q8NFD2 765 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 TANGO6Q9C0B7 1094 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 COPS2P61201 443 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 FANCCQ00597 558 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 TMC1Q8TDI8 760 aa13.35□□□□□ -0.27
TTC3-218ENST00000484047 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
TTC3-218ENST00000484047 WWC3Q9ULE0 1092 aa13.34□□□□□ -0.27
TTC3-218ENST00000484047 TLL1O43897 1013 aa13.33□□□□□ -0.28
TTC3-218ENST00000484047 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
TTC3-218ENST00000484047 EHHADHQ08426 723 aa13.33□□□□□ -0.28
TTC3-218ENST00000484047 STAU1O95793 577 aaKnown RBP13.33□□□□□ -0.28
TTC3-218ENST00000484047 TNS4Q8IZW8 715 aa13.33□□□□□ -0.28
TTC3-218ENST00000484047 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
TTC3-218ENST00000484047 PRKD2Q9BZL6 878 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms