RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 QSER1Q2KHR3 1735 aa27.09■■□□□ 1.93
R3HDM1-215ENST00000483021 ANKRD26Q9UPS8 1709 aa27.07■■□□□ 1.92
R3HDM1-215ENST00000483021 LY75O60449 1722 aa27.07■■□□□ 1.92
R3HDM1-215ENST00000483021 SLC27A3Q5K4L6 730 aa27.06■■□□□ 1.92
R3HDM1-215ENST00000483021 NBPF6Q5VWK0 638 aa27.06■■□□□ 1.92
R3HDM1-215ENST00000483021 NBPF4Q96M43 638 aa27.06■■□□□ 1.92
R3HDM1-215ENST00000483021 DCAF8L1A6NGE4 600 aa27.05■■□□□ 1.92
R3HDM1-215ENST00000483021 RAPGEF4Q8WZA2 1011 aa27.05■■□□□ 1.92
R3HDM1-215ENST00000483021 MTFR1LQ9H019 292 aa27.05■■□□□ 1.92
R3HDM1-215ENST00000483021 PTGER2P43116 358 aa27.04■■□□□ 1.92
R3HDM1-215ENST00000483021 SYTL4Q96C24 671 aaPredicted RBP27.04■■□□□ 1.92
R3HDM1-215ENST00000483021 CARD14Q9BXL6 1004 aa27.04■■□□□ 1.92
R3HDM1-215ENST00000483021 PRIM1P49642 420 aaKnown RBP27.02■■□□□ 1.92
R3HDM1-215ENST00000483021 HSP90AB2PQ58FF8 381 aa27.02■■□□□ 1.92
R3HDM1-215ENST00000483021 LRRC4BQ9NT99 713 aa27.02■■□□□ 1.92
R3HDM1-215ENST00000483021 ATF5Q9Y2D1 282 aaPredicted RBP27.02■■□□□ 1.92
R3HDM1-215ENST00000483021 NSD2O96028 1365 aa27.01■■□□□ 1.91
R3HDM1-215ENST00000483021 TATP17735 454 aaPredicted RBP27.01■■□□□ 1.91
R3HDM1-215ENST00000483021 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
R3HDM1-215ENST00000483021 MAP2P11137 1827 aaKnown RBP27■■□□□ 1.91
R3HDM1-215ENST00000483021 ZNF827Q17R98 1081 aa27■■□□□ 1.91
R3HDM1-215ENST00000483021 PKD1L3Q7Z443 1732 aa26.99■■□□□ 1.91
R3HDM1-215ENST00000483021 PCDH11XQ9BZA7 1347 aa26.98■■□□□ 1.91
R3HDM1-215ENST00000483021 PCDH11YQ9BZA8 1340 aa26.98■■□□□ 1.91
R3HDM1-215ENST00000483021 TUBGCP6Q96RT7 1819 aa26.98■■□□□ 1.91
R3HDM1-215ENST00000483021 AKT1S1Q96B36 256 aa26.96■■□□□ 1.91
R3HDM1-215ENST00000483021 EMILIN1Q9Y6C2 1016 aa26.96■■□□□ 1.91
R3HDM1-215ENST00000483021 SGIP1Q9BQI5 828 aa26.95■■□□□ 1.9
R3HDM1-215ENST00000483021 NCAPD2Q15021 1401 aa26.94■■□□□ 1.9
R3HDM1-215ENST00000483021 COL24A1Q17RW2 1714 aa26.93■■□□□ 1.9
R3HDM1-215ENST00000483021 EIF4G2P78344 907 aaKnown RBP eCLIP26.93■■□□□ 1.91e-6■■□□□ 14.4
R3HDM1-215ENST00000483021 SLC16A10Q8TF71 515 aa26.93■■□□□ 1.9
R3HDM1-215ENST00000483021 YY1P25490 414 aa26.92■■□□□ 1.9
R3HDM1-215ENST00000483021 PPM1GO15355 546 aaPredicted RBP26.91■■□□□ 1.9
R3HDM1-215ENST00000483021 POLR3GLQ9BT43 218 aa26.91■■□□□ 1.9
R3HDM1-215ENST00000483021 FHDC1Q9C0D6 1143 aaPredicted RBP26.91■■□□□ 1.9
R3HDM1-215ENST00000483021 CCNL1Q9UK58 526 aaPredicted RBP26.91■■□□□ 1.9
R3HDM1-215ENST00000483021 WASHC2AQ641Q2 1341 aa26.9■■□□□ 1.9
R3HDM1-215ENST00000483021 TOGARAM1Q9Y4F4 1720 aa26.9■■□□□ 1.9
R3HDM1-215ENST00000483021 ITGB4P16144 1822 aa26.9■■□□□ 1.9
R3HDM1-215ENST00000483021 C5P01031 1676 aa26.9■■□□□ 1.9
R3HDM1-215ENST00000483021 ARXQ96QS3 562 aa26.9■■□□□ 1.9
R3HDM1-215ENST00000483021 SYT17Q9BSW7 474 aa26.9■■□□□ 1.9
R3HDM1-215ENST00000483021 MAP3K5Q99683 1374 aa26.89■■□□□ 1.9
R3HDM1-215ENST00000483021 TFCP2L1Q9NZI6 479 aa26.89■■□□□ 1.9
R3HDM1-215ENST00000483021 PNPLA7Q6ZV29 1317 aa26.89■■□□□ 1.89
R3HDM1-215ENST00000483021 HMGB2P26583 209 aaKnown RBP26.88■■□□□ 1.89
R3HDM1-215ENST00000483021 CCER1Q8TC90 406 aaPredicted RBP26.88■■□□□ 1.89
R3HDM1-215ENST00000483021 KCNQ4P56696 695 aa26.87■■□□□ 1.89
R3HDM1-215ENST00000483021 TAF1LQ8IZX4 1826 aa26.86■■□□□ 1.89
R3HDM1-215ENST00000483021 CYP27B1O15528 508 aa26.86■■□□□ 1.89
R3HDM1-215ENST00000483021 HSPA5P11021 654 aaKnown RBP26.86■■□□□ 1.89
R3HDM1-215ENST00000483021 UTRNP46939 3433 aa26.85■■□□□ 1.89
R3HDM1-215ENST00000483021 POLD1P28340 1107 aa26.84■■□□□ 1.89
R3HDM1-215ENST00000483021 POLKQ9UBT6 870 aa26.84■■□□□ 1.89
R3HDM1-215ENST00000483021 SPG7Q9UQ90 795 aa26.84■■□□□ 1.89
R3HDM1-215ENST00000483021 PALLDQ8WX93 1383 aa26.83■■□□□ 1.88
R3HDM1-215ENST00000483021 EYA1Q99502 592 aa26.82■■□□□ 1.88
R3HDM1-215ENST00000483021 PLEKHG2Q9H7P9 1386 aa26.82■■□□□ 1.88
R3HDM1-215ENST00000483021 CHD4Q14839 1912 aa26.81■■□□□ 1.88
R3HDM1-215ENST00000483021 MPRIPQ6WCQ1 1025 aa26.81■■□□□ 1.88
R3HDM1-215ENST00000483021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.81■■□□□ 1.884e-6■□□□□ 9.1
R3HDM1-215ENST00000483021 NKX1-1Q15270 411 aaPredicted RBP26.79■■□□□ 1.88
R3HDM1-215ENST00000483021 SMARCC1Q92922 1105 aaPredicted RBP26.79■■□□□ 1.88
R3HDM1-215ENST00000483021 PANK3Q9H999 370 aa26.78■■□□□ 1.88
R3HDM1-215ENST00000483021 C4BP0C0L5 1744 aa26.77■■□□□ 1.88
R3HDM1-215ENST00000483021 TNNT2P45379 298 aaPredicted RBP26.77■■□□□ 1.88
R3HDM1-215ENST00000483021 EIF4A2Q14240 407 aaKnown RBP26.76■■□□□ 1.87
R3HDM1-215ENST00000483021 MSH5O43196 834 aa26.74■■□□□ 1.87
R3HDM1-215ENST00000483021 FLAD1Q8NFF5 587 aa26.74■■□□□ 1.87
R3HDM1-215ENST00000483021 COL23A1Q86Y22 540 aaPredicted RBP26.73■■□□□ 1.87
R3HDM1-215ENST00000483021 IFNL2Q8IZJ0 200 aa26.73■■□□□ 1.87
R3HDM1-215ENST00000483021 IGSF1Q8N6C5 1336 aa26.72■■□□□ 1.87
R3HDM1-215ENST00000483021 KLHL34Q8N239 644 aa26.72■■□□□ 1.87
R3HDM1-215ENST00000483021 PIGBQ92521 554 aa26.72■■□□□ 1.87
R3HDM1-215ENST00000483021 UBR3Q6ZT12 1888 aa26.72■■□□□ 1.87
R3HDM1-215ENST00000483021 PHKG2P15735 406 aa26.71■■□□□ 1.87
R3HDM1-215ENST00000483021 TMOD3Q9NYL9 352 aa26.71■■□□□ 1.87
R3HDM1-215ENST00000483021 GOLGB1Q14789 3259 aaKnown RBP26.7■■□□□ 1.87
R3HDM1-215ENST00000483021 AK7Q96M32 723 aa26.68■■□□□ 1.86
R3HDM1-215ENST00000483021 MORC1Q86VD1 984 aa26.67■■□□□ 1.86
R3HDM1-215ENST00000483021 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
R3HDM1-215ENST00000483021 LOC102724428A0A0B4J2F2 783 aa26.65■■□□□ 1.86
R3HDM1-215ENST00000483021 SIK1P57059 783 aa26.65■■□□□ 1.86
R3HDM1-215ENST00000483021 GPR162Q16538 588 aa26.65■■□□□ 1.86
R3HDM1-215ENST00000483021 HSP90AB1P08238 724 aaKnown RBP26.64■■□□□ 1.86
R3HDM1-215ENST00000483021 ZNF831Q5JPB2 1677 aa26.63■■□□□ 1.85
R3HDM1-215ENST00000483021 MSL1Q68DK7 614 aa26.63■■□□□ 1.85
R3HDM1-215ENST00000483021 PLEKHO1Q53GL0 409 aaPredicted RBP26.62■■□□□ 1.85
R3HDM1-215ENST00000483021 AMOTQ4VCS5 1084 aa26.61■■□□□ 1.85
R3HDM1-215ENST00000483021 NLGN2Q8NFZ4 835 aa26.61■■□□□ 1.85
R3HDM1-215ENST00000483021 ASAP1Q9ULH1 1129 aa26.61■■□□□ 1.85
R3HDM1-215ENST00000483021 ERVV-2B6SEH9 535 aa26.6■■□□□ 1.85
R3HDM1-215ENST00000483021 SSFA2P28290 1259 aa26.6■■□□□ 1.85
R3HDM1-215ENST00000483021 DCAF5Q96JK2 942 aa26.6■■□□□ 1.85
R3HDM1-215ENST00000483021 ZNF784Q8NCA9 323 aaPredicted RBP26.59■■□□□ 1.85
R3HDM1-215ENST00000483021 LINC00116Q8NCU8 138 aa26.59■■□□□ 1.85
R3HDM1-215ENST00000483021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.58■■□□□ 1.85
R3HDM1-215ENST00000483021 ATP6V1AP38606 617 aa26.58■■□□□ 1.85
R3HDM1-215ENST00000483021 PELP1Q8IZL8 1130 aaKnown RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms