RNA–Protein interactions for RNA: ENST00000483020.5

TSC2-213, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-213ENST00000483020 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
TSC2-213ENST00000483020 NLGN2Q8NFZ4 835 aa18.57■□□□□ 0.56
TSC2-213ENST00000483020 USP47Q96K76 1375 aa18.55■□□□□ 0.56
TSC2-213ENST00000483020 RGPD2P0DJD1 1756 aa18.55■□□□□ 0.56
TSC2-213ENST00000483020 KCNQ4P56696 695 aa18.55■□□□□ 0.56
TSC2-213ENST00000483020 TFCP2L1Q9NZI6 479 aa18.54■□□□□ 0.56
TSC2-213ENST00000483020 IFFO2Q5TF58 517 aa18.53■□□□□ 0.56
TSC2-213ENST00000483020 EDC4Q6P2E9 1401 aaKnown RBP18.53■□□□□ 0.56
TSC2-213ENST00000483020 DDX54Q8TDD1 881 aaKnown RBP18.53■□□□□ 0.56
TSC2-213ENST00000483020 NSD2O96028 1365 aa18.53■□□□□ 0.56
TSC2-213ENST00000483020 TMF1P82094 1093 aa18.52■□□□□ 0.56
TSC2-213ENST00000483020 ANKRD36BQ8N2N9 1353 aa18.52■□□□□ 0.55
TSC2-213ENST00000483020 YBX3P16989 372 aaKnown RBP eCLIP18.51■□□□□ 0.55
TSC2-213ENST00000483020 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
TSC2-213ENST00000483020 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
TSC2-213ENST00000483020 SLC12A5Q9H2X9 1139 aa18.51■□□□□ 0.55
TSC2-213ENST00000483020 A0A1W2PP64 1363 aa18.5■□□□□ 0.55
TSC2-213ENST00000483020 PRIM1P49642 420 aaKnown RBP18.49■□□□□ 0.55
TSC2-213ENST00000483020 HDGFL2Q7Z4V5 671 aaPredicted RBP18.49■□□□□ 0.55
TSC2-213ENST00000483020 IP6K1Q92551 441 aa18.49■□□□□ 0.55
TSC2-213ENST00000483020 LTV1Q96GA3 475 aaPredicted RBP18.49■□□□□ 0.55
TSC2-213ENST00000483020 C5P01031 1676 aa18.49■□□□□ 0.55
TSC2-213ENST00000483020 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
TSC2-213ENST00000483020 MEGF6O75095 1541 aa18.48■□□□□ 0.55
TSC2-213ENST00000483020 TERF2IPQ9NYB0 399 aa18.47■□□□□ 0.55
TSC2-213ENST00000483020 CCNL1Q9UK58 526 aaPredicted RBP18.47■□□□□ 0.55
TSC2-213ENST00000483020 ATP10DQ9P241 1426 aa18.47■□□□□ 0.55
TSC2-213ENST00000483020 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
TSC2-213ENST00000483020 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
TSC2-213ENST00000483020 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
TSC2-213ENST00000483020 MSH5O43196 834 aa18.44■□□□□ 0.54
TSC2-213ENST00000483020 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
TSC2-213ENST00000483020 COL23A1Q86Y22 540 aaPredicted RBP18.44■□□□□ 0.54
TSC2-213ENST00000483020 HOXC9P31274 260 aa18.42■□□□□ 0.54
TSC2-213ENST00000483020 ZCRB1Q8TBF4 217 aaKnown RBP18.42■□□□□ 0.54
TSC2-213ENST00000483020 MAP3K19Q56UN5 1328 aa18.42■□□□□ 0.54
TSC2-213ENST00000483020 HSPA5P11021 654 aaKnown RBP18.41■□□□□ 0.54
TSC2-213ENST00000483020 ADCY9O60503 1353 aa18.41■□□□□ 0.54
TSC2-213ENST00000483020 TOGARAM1Q9Y4F4 1720 aa18.4■□□□□ 0.54
TSC2-213ENST00000483020 FBLN1P23142 703 aa18.39■□□□□ 0.53
TSC2-213ENST00000483020 ITGB4P16144 1822 aa18.38■□□□□ 0.53
TSC2-213ENST00000483020 AMPHP49418 695 aa18.38■□□□□ 0.53
TSC2-213ENST00000483020 COG3Q96JB2 828 aa18.38■□□□□ 0.53
TSC2-213ENST00000483020 GPBP1L1Q9HC44 474 aaPredicted RBP18.38■□□□□ 0.53
TSC2-213ENST00000483020 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
TSC2-213ENST00000483020 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
TSC2-213ENST00000483020 CD2APQ9Y5K6 639 aa18.37■□□□□ 0.53
TSC2-213ENST00000483020 RTL1A6NKG5 1358 aa18.37■□□□□ 0.53
TSC2-213ENST00000483020 USHBP1Q8N6Y0 703 aa18.36■□□□□ 0.53
TSC2-213ENST00000483020 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
TSC2-213ENST00000483020 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
TSC2-213ENST00000483020 PALLDQ8WX93 1383 aa18.34■□□□□ 0.53
TSC2-213ENST00000483020 HSPA6P17066 643 aa18.34■□□□□ 0.53
TSC2-213ENST00000483020 ZNF526Q8TF50 670 aaPredicted RBP18.34■□□□□ 0.53
TSC2-213ENST00000483020 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.53
TSC2-213ENST00000483020 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
TSC2-213ENST00000483020 FLAD1Q8NFF5 587 aa18.32■□□□□ 0.52
TSC2-213ENST00000483020 PKD1L3Q7Z443 1732 aa18.32■□□□□ 0.52
TSC2-213ENST00000483020 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
TSC2-213ENST00000483020 KIF20BQ96Q89 1820 aa18.31■□□□□ 0.52
TSC2-213ENST00000483020 AMIGO3Q86WK7 504 aa18.31■□□□□ 0.52
TSC2-213ENST00000483020 RAPGEF4Q8WZA2 1011 aa18.31■□□□□ 0.52
TSC2-213ENST00000483020 WWC3Q9ULE0 1092 aa18.31■□□□□ 0.52
TSC2-213ENST00000483020 MAP2P11137 1827 aaKnown RBP18.3■□□□□ 0.52
TSC2-213ENST00000483020 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
TSC2-213ENST00000483020 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
TSC2-213ENST00000483020 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
TSC2-213ENST00000483020 FYB1O15117 783 aa18.29■□□□□ 0.52
TSC2-213ENST00000483020 TATP17735 454 aaPredicted RBP18.29■□□□□ 0.52
TSC2-213ENST00000483020 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
TSC2-213ENST00000483020 CICQ96RK0 1608 aaPredicted RBP18.29■□□□□ 0.52
TSC2-213ENST00000483020 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
TSC2-213ENST00000483020 SMIM5Q71RC9 77 aa18.28■□□□□ 0.52
TSC2-213ENST00000483020 AK7Q96M32 723 aa18.28■□□□□ 0.52
TSC2-213ENST00000483020 PHF14O94880 888 aa18.27■□□□□ 0.52
TSC2-213ENST00000483020 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
TSC2-213ENST00000483020 CYP27B1O15528 508 aa18.26■□□□□ 0.51
TSC2-213ENST00000483020 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
TSC2-213ENST00000483020 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
TSC2-213ENST00000483020 KIAA1551Q9HCM1 1747 aa18.26■□□□□ 0.51
TSC2-213ENST00000483020 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
TSC2-213ENST00000483020 NSD3Q9BZ95 1437 aa18.25■□□□□ 0.51
TSC2-213ENST00000483020 INSRP06213 1382 aa18.25■□□□□ 0.51
TSC2-213ENST00000483020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.24■□□□□ 0.51
TSC2-213ENST00000483020 KIF3CO14782 793 aa18.24■□□□□ 0.51
TSC2-213ENST00000483020 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
TSC2-213ENST00000483020 FLT4P35916 1363 aa18.24■□□□□ 0.51
TSC2-213ENST00000483020 N4BP2Q86UW6 1770 aaPredicted RBP18.24■□□□□ 0.51
TSC2-213ENST00000483020 SMARCC1Q92922 1105 aaPredicted RBP18.23■□□□□ 0.51
TSC2-213ENST00000483020 SSFA2P28290 1259 aa18.22■□□□□ 0.51
TSC2-213ENST00000483020 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
TSC2-213ENST00000483020 PIGBQ92521 554 aa18.21■□□□□ 0.51
TSC2-213ENST00000483020 PANK3Q9H999 370 aa18.21■□□□□ 0.51
TSC2-213ENST00000483020 ANKRD26Q9UPS8 1709 aa18.2■□□□□ 0.5
TSC2-213ENST00000483020 NCAPD2Q15021 1401 aa18.2■□□□□ 0.5
TSC2-213ENST00000483020 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
TSC2-213ENST00000483020 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
TSC2-213ENST00000483020 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
TSC2-213ENST00000483020 BRCA1P38398 1863 aaKnown RBP18.18■□□□□ 0.5
TSC2-213ENST00000483020 LOC102724428A0A0B4J2F2 783 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms