RNA–Protein interactions for RNA: ENST00000482017.1

MCF2L2-211, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-211ENST00000482017 MRS2Q9HD23 443 aa25.08■■□□□ 1.61
MCF2L2-211ENST00000482017 SHANK3Q9BYB0 1731 aa25.08■■□□□ 1.61
MCF2L2-211ENST00000482017 OVOS2A0A0G2JMS6 1433 aa25.07■■□□□ 1.6
MCF2L2-211ENST00000482017 TNS2Q63HR2 1409 aa25.07■■□□□ 1.6
MCF2L2-211ENST00000482017 FAM182BQ5T319 152 aa25.07■■□□□ 1.6
MCF2L2-211ENST00000482017 PKD1L3Q7Z443 1732 aa25.06■■□□□ 1.6
MCF2L2-211ENST00000482017 EXOC5O00471 708 aa25.06■■□□□ 1.6
MCF2L2-211ENST00000482017 PDE3BQ13370 1112 aa25.06■■□□□ 1.6
MCF2L2-211ENST00000482017 WDR43Q15061 677 aaKnown RBP eCLIP25.05■■□□□ 1.6
MCF2L2-211ENST00000482017 KRT27Q7Z3Y8 459 aa25.05■■□□□ 1.6
MCF2L2-211ENST00000482017 KDRP35968 1356 aa25.04■■□□□ 1.6
MCF2L2-211ENST00000482017 ZCRB1Q8TBF4 217 aaKnown RBP25.03■■□□□ 1.6
MCF2L2-211ENST00000482017 DDX54Q8TDD1 881 aaKnown RBP25.03■■□□□ 1.6
MCF2L2-211ENST00000482017 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
MCF2L2-211ENST00000482017 MIER1Q8N108 512 aa25.02■■□□□ 1.6
MCF2L2-211ENST00000482017 RSPH6AQ9H0K4 717 aa25■■□□□ 1.59
MCF2L2-211ENST00000482017 MARCH10Q8NA82 808 aaPredicted RBP24.99■■□□□ 1.59
MCF2L2-211ENST00000482017 PLEKHO1Q53GL0 409 aaPredicted RBP24.98■■□□□ 1.59
MCF2L2-211ENST00000482017 SPG7Q9UQ90 795 aa24.98■■□□□ 1.59
MCF2L2-211ENST00000482017 ZNF530Q6P9A1 599 aaPredicted RBP24.97■■□□□ 1.59
MCF2L2-211ENST00000482017 PCDH11XQ9BZA7 1347 aa24.96■■□□□ 1.59
MCF2L2-211ENST00000482017 PCDH11YQ9BZA8 1340 aa24.96■■□□□ 1.59
MCF2L2-211ENST00000482017 CCDC146Q8IYE0 955 aa24.96■■□□□ 1.59
MCF2L2-211ENST00000482017 FCHSD2O94868 740 aa24.95■■□□□ 1.58
MCF2L2-211ENST00000482017 VIRMAQ69YN4 1812 aaKnown RBP24.95■■□□□ 1.58
MCF2L2-211ENST00000482017 ADAMTS8Q9UP79 889 aa24.94■■□□□ 1.58
MCF2L2-211ENST00000482017 DOT1LQ8TEK3 1739 aa24.94■■□□□ 1.58
MCF2L2-211ENST00000482017 SBF2Q86WG5 1849 aa24.93■■□□□ 1.58
MCF2L2-211ENST00000482017 CYP27B1O15528 508 aa24.93■■□□□ 1.58
MCF2L2-211ENST00000482017 PHACTR3Q96KR7 559 aa24.93■■□□□ 1.58
MCF2L2-211ENST00000482017 NEFMP07197 916 aa24.92■■□□□ 1.58
MCF2L2-211ENST00000482017 AMOTQ4VCS5 1084 aa24.92■■□□□ 1.58
MCF2L2-211ENST00000482017 FAM9BQ8IZU0 186 aa24.92■■□□□ 1.58
MCF2L2-211ENST00000482017 DLG5Q8TDM6 1919 aa24.92■■□□□ 1.58
MCF2L2-211ENST00000482017 MTHFSDQ2M296 383 aaKnown RBP24.91■■□□□ 1.58
MCF2L2-211ENST00000482017 C1orf141Q5JVX7 400 aa24.91■■□□□ 1.58
MCF2L2-211ENST00000482017 ACSBG1Q96GR2 724 aa24.91■■□□□ 1.58
MCF2L2-211ENST00000482017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.91■■□□□ 1.58
MCF2L2-211ENST00000482017 MAPK8IP3Q9UPT6 1336 aa24.9■■□□□ 1.58
MCF2L2-211ENST00000482017 PNISRQ8TF01 805 aaKnown RBP24.9■■□□□ 1.58
MCF2L2-211ENST00000482017 TOGARAM1Q9Y4F4 1720 aa24.89■■□□□ 1.58
MCF2L2-211ENST00000482017 CCER2I3L3R5 266 aa24.89■■□□□ 1.58
MCF2L2-211ENST00000482017 PHKG2P15735 406 aa24.89■■□□□ 1.58
MCF2L2-211ENST00000482017 IFNL2Q8IZJ0 200 aa24.89■■□□□ 1.58
MCF2L2-211ENST00000482017 FAM196AQ6ZSG2 479 aa24.88■■□□□ 1.57
MCF2L2-211ENST00000482017 PNNQ9H307 717 aaKnown RBP24.88■■□□□ 1.57
MCF2L2-211ENST00000482017 PLEKHG2Q9H7P9 1386 aa24.88■■□□□ 1.57
MCF2L2-211ENST00000482017 SENP3-EIF4A1A0A087X0R7 540 aa24.87■■□□□ 1.57
MCF2L2-211ENST00000482017 PLEKHF1Q96S99 279 aa24.87■■□□□ 1.57
MCF2L2-211ENST00000482017 ITGB4P16144 1822 aa24.86■■□□□ 1.57
MCF2L2-211ENST00000482017 GAS2L2Q8NHY3 880 aa24.86■■□□□ 1.57
MCF2L2-211ENST00000482017 SCN11AQ9UI33 1791 aa24.85■■□□□ 1.57
MCF2L2-211ENST00000482017 TRIM37O94972 964 aa24.84■■□□□ 1.57
MCF2L2-211ENST00000482017 MPRIPQ6WCQ1 1025 aa24.84■■□□□ 1.57
MCF2L2-211ENST00000482017 SYTL4Q96C24 671 aaPredicted RBP24.84■■□□□ 1.57
MCF2L2-211ENST00000482017 RUNDC1Q96C34 613 aa24.84■■□□□ 1.57
MCF2L2-211ENST00000482017 RRP7AQ9Y3A4 280 aaKnown RBP24.84■■□□□ 1.57
MCF2L2-211ENST00000482017 NHSQ6T4R5 1651 aa24.84■■□□□ 1.57
MCF2L2-211ENST00000482017 AKAP4Q5JQC9 854 aa24.83■■□□□ 1.57
MCF2L2-211ENST00000482017 MAP3K5Q99683 1374 aa24.82■■□□□ 1.56
MCF2L2-211ENST00000482017 KDM6AO15550 1401 aaPredicted RBP24.82■■□□□ 1.56
MCF2L2-211ENST00000482017 TNS1Q9HBL0 1735 aaKnown RBP24.82■■□□□ 1.56
MCF2L2-211ENST00000482017 KCNQ2O43526 872 aa24.81■■□□□ 1.56
MCF2L2-211ENST00000482017 NEUROD2Q15784 382 aa24.81■■□□□ 1.56
MCF2L2-211ENST00000482017 PTF1AQ7RTS3 328 aa24.81■■□□□ 1.56
MCF2L2-211ENST00000482017 BTAF1O14981 1849 aa24.81■■□□□ 1.56
MCF2L2-211ENST00000482017 HSP90AB1P08238 724 aaKnown RBP24.8■■□□□ 1.56
MCF2L2-211ENST00000482017 NFE2L2Q16236 605 aa24.8■■□□□ 1.56
MCF2L2-211ENST00000482017 GNAT3A8MTJ3 354 aa24.79■■□□□ 1.56
MCF2L2-211ENST00000482017 PRIM1P49642 420 aaKnown RBP24.79■■□□□ 1.56
MCF2L2-211ENST00000482017 NKX1-1Q15270 411 aaPredicted RBP24.78■■□□□ 1.56
MCF2L2-211ENST00000482017 DCAF5Q96JK2 942 aa24.78■■□□□ 1.56
MCF2L2-211ENST00000482017 LGR6Q9HBX8 967 aa24.78■■□□□ 1.56
MCF2L2-211ENST00000482017 BCL9O00512 1426 aa24.78■■□□□ 1.56
MCF2L2-211ENST00000482017 RNMTO43148 476 aaKnown RBP24.77■■□□□ 1.56
MCF2L2-211ENST00000482017 APAF1O14727 1248 aa24.76■■□□□ 1.55
MCF2L2-211ENST00000482017 TMPOP42166 694 aaKnown RBP24.76■■□□□ 1.55
MCF2L2-211ENST00000482017 DCTN1Q14203 1278 aa24.76■■□□□ 1.55
MCF2L2-211ENST00000482017 RTF1Q92541 710 aaKnown RBP24.76■■□□□ 1.55
MCF2L2-211ENST00000482017 EP400Q96L91 3159 aa24.75■■□□□ 1.55
MCF2L2-211ENST00000482017 RIPK4P57078 832 aa24.75■■□□□ 1.55
MCF2L2-211ENST00000482017 SF3B2Q13435 895 aaKnown RBP24.75■■□□□ 1.55
MCF2L2-211ENST00000482017 MCM10Q7L590 875 aa24.75■■□□□ 1.55
MCF2L2-211ENST00000482017 UPF1Q92900 1129 aaKnown RBP eCLIP24.75■■□□□ 1.55
MCF2L2-211ENST00000482017 ADAMTS7Q9UKP4 1686 aa24.74■■□□□ 1.55
MCF2L2-211ENST00000482017 CABP4P57796 275 aa24.73■■□□□ 1.55
MCF2L2-211ENST00000482017 BCL11BQ9C0K0 894 aaPredicted RBP24.73■■□□□ 1.55
MCF2L2-211ENST00000482017 TMOD3Q9NYL9 352 aa24.73■■□□□ 1.55
MCF2L2-211ENST00000482017 APBA3O96018 575 aa24.72■■□□□ 1.55
MCF2L2-211ENST00000482017 THUMPD2Q9BTF0 503 aaKnown RBP24.72■■□□□ 1.55
MCF2L2-211ENST00000482017 SALL2Q9Y467 1007 aaPredicted RBP24.72■■□□□ 1.55
MCF2L2-211ENST00000482017 IL17REQ8NFR9 667 aa24.71■■□□□ 1.55
MCF2L2-211ENST00000482017 ERVV-2B6SEH9 535 aa24.7■■□□□ 1.54
MCF2L2-211ENST00000482017 PIGBQ92521 554 aa24.7■■□□□ 1.54
MCF2L2-211ENST00000482017 SIPA1L3O60292 1781 aaPredicted RBP24.7■■□□□ 1.54
MCF2L2-211ENST00000482017 TEFQ10587 303 aa24.69■■□□□ 1.54
MCF2L2-211ENST00000482017 DEFB132Q7Z7B7 95 aa24.68■■□□□ 1.54
MCF2L2-211ENST00000482017 NFATC2IPQ8NCF5 419 aa24.68■■□□□ 1.54
MCF2L2-211ENST00000482017 SLC52A2Q9HAB3 445 aa24.68■■□□□ 1.54
MCF2L2-211ENST00000482017 MRC1P22897 1456 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms