RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 GJD4Q96KN9 370 aaPredicted RBP5.03□□□□□ -1.6
SMC6-208ENST00000481708 SYCP2Q9BX26 1530 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 OATP04181 439 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 ZNF662Q6ZS27 426 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.03□□□□□ -1.6
SMC6-208ENST00000481708 NEXMIFQ5QGS0 1516 aa5.03□□□□□ -1.6
SMC6-208ENST00000481708 SCAF11Q99590 1463 aaKnown RBP5.03□□□□□ -1.6
SMC6-208ENST00000481708 ABL2P42684 1182 aa5.02□□□□□ -1.61
SMC6-208ENST00000481708 ZSWIM6Q9HCJ5 1215 aa5.02□□□□□ -1.61
SMC6-208ENST00000481708 TSKSQ9UJT2 592 aa5.02□□□□□ -1.61
SMC6-208ENST00000481708 PPM1GO15355 546 aaPredicted RBP5.02□□□□□ -1.61
SMC6-208ENST00000481708 QPCTQ16769 361 aa5.02□□□□□ -1.61
SMC6-208ENST00000481708 LRRC7Q96NW7 1537 aa5.01□□□□□ -1.61
SMC6-208ENST00000481708 KIAA1210Q9ULL0 1709 aa5.01□□□□□ -1.61
SMC6-208ENST00000481708 HDGFL1Q5TGJ6 251 aa5.01□□□□□ -1.61
SMC6-208ENST00000481708 EYA1Q99502 592 aa5.01□□□□□ -1.61
SMC6-208ENST00000481708 FMN2Q9NZ56 1722 aa5.01□□□□□ -1.61
SMC6-208ENST00000481708 GNEQ9Y223 722 aaKnown RBP5.01□□□□□ -1.61
SMC6-208ENST00000481708 FMN1Q68DA7 1419 aa5□□□□□ -1.61
SMC6-208ENST00000481708 GIMAP6Q6P9H5 292 aa5□□□□□ -1.61
SMC6-208ENST00000481708 PPP1R12CQ9BZL4 782 aa5□□□□□ -1.61
SMC6-208ENST00000481708 BCL2L12Q9HB09 334 aa5□□□□□ -1.61
SMC6-208ENST00000481708 ZFYVE9O95405 1425 aa5□□□□□ -1.61
SMC6-208ENST00000481708 ZNF831Q5JPB2 1677 aa5□□□□□ -1.61
SMC6-208ENST00000481708 CDCA8Q53HL2 280 aa5□□□□□ -1.61
SMC6-208ENST00000481708 PPP2R2DQ66LE6 453 aa5□□□□□ -1.61
SMC6-208ENST00000481708 PHLPP1O60346 1717 aa5□□□□□ -1.61
SMC6-208ENST00000481708 SPATA32Q96LK8 384 aa5□□□□□ -1.61
SMC6-208ENST00000481708 HMX1Q9NP08 348 aaPredicted RBP5□□□□□ -1.61
SMC6-208ENST00000481708 ZMIZ1Q9ULJ6 1067 aa5□□□□□ -1.61
SMC6-208ENST00000481708 NOS1P29475 1434 aa5□□□□□ -1.61
SMC6-208ENST00000481708 CLK2P49760 499 aaKnown RBP4.99□□□□□ -1.61
SMC6-208ENST00000481708 PALM3A6NDB9 673 aaPredicted RBP4.99□□□□□ -1.61
SMC6-208ENST00000481708 RCCD1A6NED2 376 aa4.99□□□□□ -1.61
SMC6-208ENST00000481708 RIMBP2O15034 1052 aa4.99□□□□□ -1.61
SMC6-208ENST00000481708 BANK1Q8NDB2 785 aa4.99□□□□□ -1.61
SMC6-208ENST00000481708 BRPF3Q9ULD4 1205 aa4.99□□□□□ -1.61
SMC6-208ENST00000481708 LAMB1P07942 1786 aa4.99□□□□□ -1.61
SMC6-208ENST00000481708 ZNF710Q8N1W2 664 aa4.99□□□□□ -1.61
SMC6-208ENST00000481708 RGPD1P0DJD0 1748 aa4.99□□□□□ -1.61
SMC6-208ENST00000481708 TMED8Q6PL24 325 aaPredicted RBP4.98□□□□□ -1.61
SMC6-208ENST00000481708 VRTNQ9H8Y1 702 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 ERBINQ96RT1 1412 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 NUP188Q5SRE5 1749 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 ERVK-7P63135 1459 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 PPP4R3BQ5MIZ7 849 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 TBC1D2Q9BYX2 928 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 ACIN1Q9UKV3 1341 aaKnown RBP4.98□□□□□ -1.61
SMC6-208ENST00000481708 BRWD3Q6RI45 1802 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 GLI3P10071 1580 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 NUDT18Q6ZVK8 323 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 RBM46Q8TBY0 533 aaKnown RBP4.98□□□□□ -1.61
SMC6-208ENST00000481708 STK32AQ8WU08 396 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 SCUBE2Q9NQ36 999 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 CAMTA1Q9Y6Y1 1673 aa4.98□□□□□ -1.61
SMC6-208ENST00000481708 PPP1R3GB7ZBB8 358 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 PROX2Q3B8N5 592 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 PAPPAQ13219 1627 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 KDM4AO75164 1064 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 RECKO95980 971 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 TCF3P15923 654 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 CERS3Q8IU89 383 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 HOXB1P14653 301 aaPredicted RBP4.97□□□□□ -1.61
SMC6-208ENST00000481708 DCCP43146 1447 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 NRXN1Q9ULB1 1477 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 SMAPO00193 183 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 CD46P15529 392 aa4.97□□□□□ -1.61
SMC6-208ENST00000481708 SPIRE2Q8WWL2 714 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 SBF2Q86WG5 1849 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 ANKRD26Q9UPS8 1709 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.96□□□□□ -1.62
SMC6-208ENST00000481708 TRIM6-TRIM34B2RNG4 842 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 PTPREP23469 700 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 BRD2P25440 801 aaKnown RBP4.96□□□□□ -1.62
SMC6-208ENST00000481708 LDLRAD1Q5T700 205 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 TRIM34Q9BYJ4 488 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 PARP4Q9UKK3 1724 aaKnown RBP4.96□□□□□ -1.62
SMC6-208ENST00000481708 TATDN2Q93075 761 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 ALG2Q9H553 416 aa4.96□□□□□ -1.62
SMC6-208ENST00000481708 CDC42BPGQ6DT37 1551 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 NRKQ7Z2Y5 1582 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 VAC14Q08AM6 782 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 RTL5Q5HYW3 569 aaPredicted RBP4.95□□□□□ -1.62
SMC6-208ENST00000481708 POTEEQ6S8J3 1075 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 PRR7Q8TB68 274 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 EPS8L1Q8TE68 723 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 OTUD5Q96G74 571 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 TMEM134Q9H6X4 195 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 TFIP11Q9UBB9 837 aaKnown RBP4.95□□□□□ -1.62
SMC6-208ENST00000481708 ZC3H4Q9UPT8 1303 aaKnown RBP4.95□□□□□ -1.62
SMC6-208ENST00000481708 ABCC6O95255 1503 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 NPAS4Q8IUM7 802 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 A2MP01023 1474 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 PNMA3Q9UL41 463 aa4.95□□□□□ -1.62
SMC6-208ENST00000481708 LMO7Q8WWI1 1683 aa4.94□□□□□ -1.62
SMC6-208ENST00000481708 CSB-PGBD3P0DP91 1061 aa4.94□□□□□ -1.62
SMC6-208ENST00000481708 LMOD1P29536 600 aaPredicted RBP4.94□□□□□ -1.62
SMC6-208ENST00000481708 TMEM164Q5U3C3 297 aa4.94□□□□□ -1.62
SMC6-208ENST00000481708 MAMSTRQ6ZN01 415 aa4.94□□□□□ -1.62
SMC6-208ENST00000481708 KCNK17Q96T54 332 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms