RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 WDR90Q96KV7 1748 aa13.56□□□□□ -0.24
SMARCE1-210ENST00000481231 L3MBTL2Q969R5 705 aa13.56□□□□□ -0.24
SMARCE1-210ENST00000481231 KLRG1Q96E93 195 aa13.56□□□□□ -0.24
SMARCE1-210ENST00000481231 LY75O60449 1722 aa13.56□□□□□ -0.24
SMARCE1-210ENST00000481231 ANKRD24Q8TF21 1146 aa13.55□□□□□ -0.24
SMARCE1-210ENST00000481231 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
SMARCE1-210ENST00000481231 ANKRD36BQ8N2N9 1353 aa13.55□□□□□ -0.24
SMARCE1-210ENST00000481231 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
SMARCE1-210ENST00000481231 JMYQ8N9B5 988 aa13.54□□□□□ -0.24
SMARCE1-210ENST00000481231 NMRK2Q9NPI5 230 aa13.54□□□□□ -0.24
SMARCE1-210ENST00000481231 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
SMARCE1-210ENST00000481231 PCNTO95613 3336 aa13.53□□□□□ -0.24
SMARCE1-210ENST00000481231 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
SMARCE1-210ENST00000481231 CICQ96RK0 1608 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-210ENST00000481231 USP47Q96K76 1375 aa13.5□□□□□ -0.25
SMARCE1-210ENST00000481231 SMIM5Q71RC9 77 aa13.5□□□□□ -0.25
SMARCE1-210ENST00000481231 AMIGO3Q86WK7 504 aa13.5□□□□□ -0.25
SMARCE1-210ENST00000481231 SIN3AQ96ST3 1273 aa13.5□□□□□ -0.25
SMARCE1-210ENST00000481231 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-210ENST00000481231 KTN1Q86UP2 1357 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-210ENST00000481231 SLC34A2O95436 690 aa13.49□□□□□ -0.25
SMARCE1-210ENST00000481231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMARCE1-210ENST00000481231 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-210ENST00000481231 C5P01031 1676 aa13.49□□□□□ -0.25
SMARCE1-210ENST00000481231 LTN1O94822 1766 aa13.48□□□□□ -0.25
SMARCE1-210ENST00000481231 NME9Q86XW9 330 aa13.48□□□□□ -0.25
SMARCE1-210ENST00000481231 LTV1Q96GA3 475 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-210ENST00000481231 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
SMARCE1-210ENST00000481231 PHF14O94880 888 aa13.47□□□□□ -0.25
SMARCE1-210ENST00000481231 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
SMARCE1-210ENST00000481231 MEGF6O75095 1541 aa13.46□□□□□ -0.25
SMARCE1-210ENST00000481231 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
SMARCE1-210ENST00000481231 TOGARAM1Q9Y4F4 1720 aa13.46□□□□□ -0.25
SMARCE1-210ENST00000481231 USP31Q70CQ4 1352 aa13.45□□□□□ -0.26
SMARCE1-210ENST00000481231 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
SMARCE1-210ENST00000481231 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-210ENST00000481231 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
SMARCE1-210ENST00000481231 HSPA1AP0DMV8 641 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-210ENST00000481231 HSPA1BP0DMV9 641 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-210ENST00000481231 BCS1LQ9Y276 419 aa13.44□□□□□ -0.26
SMARCE1-210ENST00000481231 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
SMARCE1-210ENST00000481231 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
SMARCE1-210ENST00000481231 FSTL1Q12841 308 aa13.43□□□□□ -0.26
SMARCE1-210ENST00000481231 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
SMARCE1-210ENST00000481231 ZCRB1Q8TBF4 217 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-210ENST00000481231 AK7Q96M32 723 aa13.43□□□□□ -0.26
SMARCE1-210ENST00000481231 FAM208AQ9UK61 1670 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-210ENST00000481231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-210ENST00000481231 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
SMARCE1-210ENST00000481231 KCPQ6ZWJ8 1503 aa13.42□□□□□ -0.26
SMARCE1-210ENST00000481231 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
SMARCE1-210ENST00000481231 KIAA1551Q9HCM1 1747 aa13.4□□□□□ -0.26
SMARCE1-210ENST00000481231 A0A0G2JLW4 131 aa13.4□□□□□ -0.26
SMARCE1-210ENST00000481231 C9orf131Q5VYM1 1079 aa13.4□□□□□ -0.26
SMARCE1-210ENST00000481231 IP6K1Q92551 441 aa13.4□□□□□ -0.26
SMARCE1-210ENST00000481231 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
SMARCE1-210ENST00000481231 CD163L1Q9NR16 1453 aa13.4□□□□□ -0.26
SMARCE1-210ENST00000481231 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
SMARCE1-210ENST00000481231 N4BP2Q86UW6 1770 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-210ENST00000481231 MMP10P09238 476 aa13.38□□□□□ -0.27
SMARCE1-210ENST00000481231 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
SMARCE1-210ENST00000481231 CARD11Q9BXL7 1154 aa13.38□□□□□ -0.27
SMARCE1-210ENST00000481231 PLEKHG2Q9H7P9 1386 aa13.37□□□□□ -0.27
SMARCE1-210ENST00000481231 FCHSD2O94868 740 aa13.37□□□□□ -0.27
SMARCE1-210ENST00000481231 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
SMARCE1-210ENST00000481231 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
SMARCE1-210ENST00000481231 RRAGCQ9HB90 399 aa13.37□□□□□ -0.27
SMARCE1-210ENST00000481231 SSFA2P28290 1259 aa13.36□□□□□ -0.27
SMARCE1-210ENST00000481231 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
SMARCE1-210ENST00000481231 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
SMARCE1-210ENST00000481231 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
SMARCE1-210ENST00000481231 NSD3Q9BZ95 1437 aa13.36□□□□□ -0.27
SMARCE1-210ENST00000481231 RGPD2P0DJD1 1756 aa13.35□□□□□ -0.27
SMARCE1-210ENST00000481231 DPEP1P16444 411 aa13.35□□□□□ -0.27
SMARCE1-210ENST00000481231 FBLN1P23142 703 aa13.35□□□□□ -0.27
SMARCE1-210ENST00000481231 HOXC9P31274 260 aa13.35□□□□□ -0.27
SMARCE1-210ENST00000481231 SMC1BQ8NDV3 1235 aa13.35□□□□□ -0.27
SMARCE1-210ENST00000481231 PKD1L3Q7Z443 1732 aa13.35□□□□□ -0.27
SMARCE1-210ENST00000481231 MAP3K19Q56UN5 1328 aa13.35□□□□□ -0.27
SMARCE1-210ENST00000481231 KDM2BQ8NHM5 1336 aa13.35□□□□□ -0.27
SMARCE1-210ENST00000481231 EDC4Q6P2E9 1401 aaKnown RBP13.34□□□□□ -0.27
SMARCE1-210ENST00000481231 GNPATO15228 680 aa13.34□□□□□ -0.27
SMARCE1-210ENST00000481231 TGFB2P61812 414 aa13.34□□□□□ -0.27
SMARCE1-210ENST00000481231 HDGFL2Q7Z4V5 671 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-210ENST00000481231 RNF181Q9P0P0 153 aa13.34□□□□□ -0.27
SMARCE1-210ENST00000481231 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
SMARCE1-210ENST00000481231 A0A1W2PP64 1363 aa13.33□□□□□ -0.27
SMARCE1-210ENST00000481231 NBPF6Q5VWK0 638 aa13.33□□□□□ -0.28
SMARCE1-210ENST00000481231 NBPF4Q96M43 638 aa13.33□□□□□ -0.28
SMARCE1-210ENST00000481231 TERF2IPQ9NYB0 399 aa13.32□□□□□ -0.28
SMARCE1-210ENST00000481231 PCDH11XQ9BZA7 1347 aa13.32□□□□□ -0.28
SMARCE1-210ENST00000481231 PCDH11YQ9BZA8 1340 aa13.32□□□□□ -0.28
SMARCE1-210ENST00000481231 TNRC6CQ9HCJ0 1690 aaKnown RBP13.31□□□□□ -0.28
SMARCE1-210ENST00000481231 HMGB2P26583 209 aaKnown RBP13.31□□□□□ -0.28
SMARCE1-210ENST00000481231 AMPHP49418 695 aa13.31□□□□□ -0.28
SMARCE1-210ENST00000481231 RAPGEF4Q8WZA2 1011 aa13.31□□□□□ -0.28
SMARCE1-210ENST00000481231 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-210ENST00000481231 TONSLQ96HA7 1378 aa13.31□□□□□ -0.28
SMARCE1-210ENST00000481231 LOC102724428A0A0B4J2F2 783 aa13.3□□□□□ -0.28
SMARCE1-210ENST00000481231 CYP27B1O15528 508 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms