RNA–Protein interactions for RNA: ENST00000481168.1

RPN1-204, Transcript of ribophorin I, humanhuman

TSL 2

Gene RPN1, Length 751 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-204ENST00000481168 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
RPN1-204ENST00000481168 CENPJQ9HC77 1338 aaPredicted RBP18.48■□□□□ 0.55
RPN1-204ENST00000481168 ANKRD24Q8TF21 1146 aa18.47■□□□□ 0.55
RPN1-204ENST00000481168 WDR90Q96KV7 1748 aa18.46■□□□□ 0.55
RPN1-204ENST00000481168 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
RPN1-204ENST00000481168 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
RPN1-204ENST00000481168 NFAT5O94916 1531 aa18.44■□□□□ 0.54
RPN1-204ENST00000481168 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
RPN1-204ENST00000481168 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
RPN1-204ENST00000481168 FSTL1Q12841 308 aa18.43■□□□□ 0.54
RPN1-204ENST00000481168 NBPF1Q3BBV0 1214 aa18.43■□□□□ 0.54
RPN1-204ENST00000481168 NSD2O96028 1365 aa18.42■□□□□ 0.54
RPN1-204ENST00000481168 USP47Q96K76 1375 aa18.42■□□□□ 0.54
RPN1-204ENST00000481168 HSPA1AP0DMV8 641 aaKnown RBP18.41■□□□□ 0.54
RPN1-204ENST00000481168 HSPA1BP0DMV9 641 aaKnown RBP18.41■□□□□ 0.54
RPN1-204ENST00000481168 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
RPN1-204ENST00000481168 ARHGAP27Q6ZUM4 889 aa18.39■□□□□ 0.53
RPN1-204ENST00000481168 LY75O60449 1722 aa18.39■□□□□ 0.53
RPN1-204ENST00000481168 BCS1LQ9Y276 419 aa18.38■□□□□ 0.53
RPN1-204ENST00000481168 PHF14O94880 888 aa18.37■□□□□ 0.53
RPN1-204ENST00000481168 HMGB2P26583 209 aaKnown RBP18.37■□□□□ 0.53
RPN1-204ENST00000481168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
RPN1-204ENST00000481168 LTV1Q96GA3 475 aaPredicted RBP18.37■□□□□ 0.53
RPN1-204ENST00000481168 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
RPN1-204ENST00000481168 ZCRB1Q8TBF4 217 aaKnown RBP18.36■□□□□ 0.53
RPN1-204ENST00000481168 AK7Q96M32 723 aa18.36■□□□□ 0.53
RPN1-204ENST00000481168 KTN1Q86UP2 1357 aaKnown RBP18.35■□□□□ 0.53
RPN1-204ENST00000481168 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
RPN1-204ENST00000481168 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
RPN1-204ENST00000481168 DOT1LQ8TEK3 1739 aa18.33■□□□□ 0.52
RPN1-204ENST00000481168 C9orf131Q5VYM1 1079 aa18.33■□□□□ 0.52
RPN1-204ENST00000481168 AMIGO3Q86WK7 504 aa18.33■□□□□ 0.52
RPN1-204ENST00000481168 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.32■□□□□ 0.52
RPN1-204ENST00000481168 NME9Q86XW9 330 aa18.32■□□□□ 0.52
RPN1-204ENST00000481168 RRAGCQ9HB90 399 aa18.32■□□□□ 0.52
RPN1-204ENST00000481168 PCDH10Q9P2E7 1040 aa18.32■□□□□ 0.52
RPN1-204ENST00000481168 KDM2BQ8NHM5 1336 aa18.31■□□□□ 0.52
RPN1-204ENST00000481168 A0A0G2JLW4 131 aa18.31■□□□□ 0.52
RPN1-204ENST00000481168 SMC1BQ8NDV3 1235 aa18.31■□□□□ 0.52
RPN1-204ENST00000481168 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
RPN1-204ENST00000481168 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
RPN1-204ENST00000481168 FCHSD2O94868 740 aa18.29■□□□□ 0.52
RPN1-204ENST00000481168 IP6K1Q92551 441 aa18.29■□□□□ 0.52
RPN1-204ENST00000481168 C5P01031 1676 aa18.28■□□□□ 0.52
RPN1-204ENST00000481168 TGFB2P61812 414 aa18.28■□□□□ 0.52
RPN1-204ENST00000481168 KIAA1210Q9ULL0 1709 aa18.28■□□□□ 0.52
RPN1-204ENST00000481168 RAB3GAP2Q9H2M9 1393 aa18.28■□□□□ 0.52
RPN1-204ENST00000481168 PLEKHG2Q9H7P9 1386 aa18.28■□□□□ 0.52
RPN1-204ENST00000481168 PXDNLA1KZ92 1463 aa18.27■□□□□ 0.52
RPN1-204ENST00000481168 MMP10P09238 476 aa18.27■□□□□ 0.52
RPN1-204ENST00000481168 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
RPN1-204ENST00000481168 KCPQ6ZWJ8 1503 aa18.27■□□□□ 0.51
RPN1-204ENST00000481168 LTN1O94822 1766 aa18.25■□□□□ 0.51
RPN1-204ENST00000481168 SSFA2P28290 1259 aa18.25■□□□□ 0.51
RPN1-204ENST00000481168 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
RPN1-204ENST00000481168 NSD3Q9BZ95 1437 aa18.24■□□□□ 0.51
RPN1-204ENST00000481168 DPEP1P16444 411 aa18.24■□□□□ 0.51
RPN1-204ENST00000481168 RNF181Q9P0P0 153 aa18.24■□□□□ 0.51
RPN1-204ENST00000481168 SMARCC1Q92922 1105 aaPredicted RBP18.23■□□□□ 0.51
RPN1-204ENST00000481168 MEGF6O75095 1541 aa18.22■□□□□ 0.51
RPN1-204ENST00000481168 C10orf71Q711Q0 1435 aa18.22■□□□□ 0.51
RPN1-204ENST00000481168 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
RPN1-204ENST00000481168 FAM161AQ3B820 660 aa18.2■□□□□ 0.5
RPN1-204ENST00000481168 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
RPN1-204ENST00000481168 SBNO2Q9Y2G9 1366 aa18.19■□□□□ 0.5
RPN1-204ENST00000481168 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
RPN1-204ENST00000481168 GNPATO15228 680 aa18.19■□□□□ 0.5
RPN1-204ENST00000481168 AMPHP49418 695 aa18.19■□□□□ 0.5
RPN1-204ENST00000481168 LINC00116Q8NCU8 138 aa18.19■□□□□ 0.5
RPN1-204ENST00000481168 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
RPN1-204ENST00000481168 CCDC87Q9NVE4 849 aa18.18■□□□□ 0.5
RPN1-204ENST00000481168 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
RPN1-204ENST00000481168 HOXC9P31274 260 aa18.17■□□□□ 0.5
RPN1-204ENST00000481168 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
RPN1-204ENST00000481168 USHBP1Q8N6Y0 703 aa18.17■□□□□ 0.5
RPN1-204ENST00000481168 TMC1Q8TDI8 760 aa18.17■□□□□ 0.5
RPN1-204ENST00000481168 UBR3Q6ZT12 1888 aa18.17■□□□□ 0.5
RPN1-204ENST00000481168 CGNL1Q0VF96 1302 aa18.17■□□□□ 0.5
RPN1-204ENST00000481168 PIM2Q9P1W9 311 aa18.16■□□□□ 0.5
RPN1-204ENST00000481168 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
RPN1-204ENST00000481168 LOC102724428A0A0B4J2F2 783 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 FOXN1O15353 648 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 VEGFAP15692 232 aaPredicted RBP18.15■□□□□ 0.5
RPN1-204ENST00000481168 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
RPN1-204ENST00000481168 SIK1P57059 783 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 TMF1P82094 1093 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 DALRD3Q5D0E6 543 aaKnown RBP18.15■□□□□ 0.5
RPN1-204ENST00000481168 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 NLGN1Q8N2Q7 840 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
RPN1-204ENST00000481168 KCNA3P22001 575 aa18.14■□□□□ 0.49
RPN1-204ENST00000481168 PIGBQ92521 554 aa18.14■□□□□ 0.49
RPN1-204ENST00000481168 DCAF5Q96JK2 942 aa18.14■□□□□ 0.49
RPN1-204ENST00000481168 MKRN1Q9UHC7 482 aaKnown RBP18.14■□□□□ 0.49
RPN1-204ENST00000481168 PCDH11XQ9BZA7 1347 aa18.14■□□□□ 0.49
RPN1-204ENST00000481168 PCDH11YQ9BZA8 1340 aa18.14■□□□□ 0.49
RPN1-204ENST00000481168 MON2Q7Z3U7 1717 aa18.14■□□□□ 0.49
RPN1-204ENST00000481168 KIAA1551Q9HCM1 1747 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms