RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 COL3A1P02461 1466 aaPredicted RBP14.55□□□□□ -0.08
ATG4B-219ENST00000479941 SULT6B1Q6IMI4 303 aa14.54□□□□□ -0.08
ATG4B-219ENST00000479941 PRKRIP1Q9H875 184 aaPredicted RBP14.54□□□□□ -0.08
ATG4B-219ENST00000479941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.54□□□□□ -0.08
ATG4B-219ENST00000479941 NUDCQ9Y266 331 aa14.54□□□□□ -0.08
ATG4B-219ENST00000479941 KDRP35968 1356 aa14.54□□□□□ -0.08
ATG4B-219ENST00000479941 RGPD1P0DJD0 1748 aa14.53□□□□□ -0.08
ATG4B-219ENST00000479941 MYBBP1AQ9BQG0 1328 aaKnown RBP14.53□□□□□ -0.08
ATG4B-219ENST00000479941 DDX54Q8TDD1 881 aaKnown RBP14.53□□□□□ -0.08
ATG4B-219ENST00000479941 SPG7Q9UQ90 795 aa14.53□□□□□ -0.08
ATG4B-219ENST00000479941 PCDH11XQ9BZA7 1347 aa14.52□□□□□ -0.08
ATG4B-219ENST00000479941 PCDH11YQ9BZA8 1340 aa14.52□□□□□ -0.08
ATG4B-219ENST00000479941 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.09
ATG4B-219ENST00000479941 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.09
ATG4B-219ENST00000479941 AEBP1Q8IUX7 1158 aa14.52□□□□□ -0.09
ATG4B-219ENST00000479941 AMOTQ4VCS5 1084 aa14.51□□□□□ -0.09
ATG4B-219ENST00000479941 TRIM37O94972 964 aa14.5□□□□□ -0.09
ATG4B-219ENST00000479941 HMOX1P09601 288 aa14.5□□□□□ -0.09
ATG4B-219ENST00000479941 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
ATG4B-219ENST00000479941 CYP27B1O15528 508 aa14.48□□□□□ -0.09
ATG4B-219ENST00000479941 ANP32CO43423 234 aa14.48□□□□□ -0.09
ATG4B-219ENST00000479941 IFNL2Q8IZJ0 200 aa14.48□□□□□ -0.09
ATG4B-219ENST00000479941 BCL11BQ9C0K0 894 aaPredicted RBP14.48□□□□□ -0.09
ATG4B-219ENST00000479941 PKD1L3Q7Z443 1732 aa14.48□□□□□ -0.09
ATG4B-219ENST00000479941 SHANK3Q9BYB0 1731 aa14.48□□□□□ -0.09
ATG4B-219ENST00000479941 U2AF1L5P0DN76 240 aaPredicted RBP14.47□□□□□ -0.09
ATG4B-219ENST00000479941 BAG6P46379 1132 aa14.47□□□□□ -0.09
ATG4B-219ENST00000479941 U2AF1Q01081 240 aaKnown RBP eCLIP14.47□□□□□ -0.09
ATG4B-219ENST00000479941 FCHSD2O94868 740 aa14.46□□□□□ -0.09
ATG4B-219ENST00000479941 PHKG2P15735 406 aa14.46□□□□□ -0.09
ATG4B-219ENST00000479941 NKX1-1Q15270 411 aaPredicted RBP14.46□□□□□ -0.09
ATG4B-219ENST00000479941 ACSBG1Q96GR2 724 aa14.46□□□□□ -0.09
ATG4B-219ENST00000479941 APBA3O96018 575 aa14.45□□□□□ -0.1
ATG4B-219ENST00000479941 HSP90AB1P08238 724 aaKnown RBP14.45□□□□□ -0.1
ATG4B-219ENST00000479941 SBF2Q86WG5 1849 aa14.45□□□□□ -0.1
ATG4B-219ENST00000479941 KCNQ2O43526 872 aa14.44□□□□□ -0.1
ATG4B-219ENST00000479941 ZNF530Q6P9A1 599 aaPredicted RBP14.44□□□□□ -0.1
ATG4B-219ENST00000479941 RSPH6AQ9H0K4 717 aa14.44□□□□□ -0.1
ATG4B-219ENST00000479941 PRKAR2BP31323 418 aa14.43□□□□□ -0.1
ATG4B-219ENST00000479941 C1orf141Q5JVX7 400 aa14.43□□□□□ -0.1
ATG4B-219ENST00000479941 DEFB132Q7Z7B7 95 aa14.43□□□□□ -0.1
ATG4B-219ENST00000479941 TNS1Q9HBL0 1735 aaKnown RBP14.43□□□□□ -0.1
ATG4B-219ENST00000479941 NHSQ6T4R5 1651 aa14.42□□□□□ -0.1
ATG4B-219ENST00000479941 KAT6BQ8WYB5 2073 aa14.42□□□□□ -0.1
ATG4B-219ENST00000479941 PLSCR1O15162 318 aa14.42□□□□□ -0.1
ATG4B-219ENST00000479941 PRIM1P49642 420 aaKnown RBP14.42□□□□□ -0.1
ATG4B-219ENST00000479941 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
ATG4B-219ENST00000479941 MTHFSDQ2M296 383 aaKnown RBP14.42□□□□□ -0.1
ATG4B-219ENST00000479941 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
ATG4B-219ENST00000479941 PTF1AQ7RTS3 328 aa14.42□□□□□ -0.1
ATG4B-219ENST00000479941 SYTL4Q96C24 671 aaPredicted RBP14.42□□□□□ -0.1
ATG4B-219ENST00000479941 DCAF5Q96JK2 942 aa14.42□□□□□ -0.1
ATG4B-219ENST00000479941 PNNQ9H307 717 aaKnown RBP14.42□□□□□ -0.1
ATG4B-219ENST00000479941 GAS2L2Q8NHY3 880 aa14.41□□□□□ -0.1
ATG4B-219ENST00000479941 NEFMP07197 916 aa14.4□□□□□ -0.1
ATG4B-219ENST00000479941 WDR43Q15061 677 aaKnown RBP eCLIP14.4□□□□□ -0.1
ATG4B-219ENST00000479941 CAMKK2Q96RR4 588 aa14.4□□□□□ -0.1
ATG4B-219ENST00000479941 DOT1LQ8TEK3 1739 aa14.39□□□□□ -0.11
ATG4B-219ENST00000479941 ERVV-2B6SEH9 535 aa14.39□□□□□ -0.11
ATG4B-219ENST00000479941 PHACTR3Q96KR7 559 aa14.39□□□□□ -0.11
ATG4B-219ENST00000479941 EZH2Q15910 746 aaKnown RBP14.38□□□□□ -0.11
ATG4B-219ENST00000479941 MPRIPQ6WCQ1 1025 aa14.38□□□□□ -0.11
ATG4B-219ENST00000479941 PLEKHF1Q96S99 279 aa14.37□□□□□ -0.11
ATG4B-219ENST00000479941 TMOD3Q9NYL9 352 aa14.37□□□□□ -0.11
ATG4B-219ENST00000479941 TOGARAM1Q9Y4F4 1720 aa14.36□□□□□ -0.11
ATG4B-219ENST00000479941 KDM6AO15550 1401 aaPredicted RBP14.36□□□□□ -0.11
ATG4B-219ENST00000479941 GNAT3A8MTJ3 354 aa14.36□□□□□ -0.11
ATG4B-219ENST00000479941 PIGBQ92521 554 aa14.36□□□□□ -0.11
ATG4B-219ENST00000479941 RGPD3A6NKT7 1758 aaPredicted RBP14.36□□□□□ -0.11
ATG4B-219ENST00000479941 RGPD4Q7Z3J3 1758 aa14.36□□□□□ -0.11
ATG4B-219ENST00000479941 MAPK8IP3Q9UPT6 1336 aa14.36□□□□□ -0.11
ATG4B-219ENST00000479941 BTAF1O14981 1849 aa14.36□□□□□ -0.11
ATG4B-219ENST00000479941 MAP3K5Q99683 1374 aa14.35□□□□□ -0.11
ATG4B-219ENST00000479941 RNMTO43148 476 aaKnown RBP14.35□□□□□ -0.11
ATG4B-219ENST00000479941 CABP4P57796 275 aa14.35□□□□□ -0.11
ATG4B-219ENST00000479941 ADAMTS8Q9UP79 889 aa14.35□□□□□ -0.11
ATG4B-219ENST00000479941 TXNRD1Q16881 649 aa14.34□□□□□ -0.11
ATG4B-219ENST00000479941 CCDC184Q52MB2 194 aa14.34□□□□□ -0.11
ATG4B-219ENST00000479941 PROM2Q8N271 834 aa14.34□□□□□ -0.11
ATG4B-219ENST00000479941 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-219ENST00000479941 LGR6Q9HBX8 967 aa14.34□□□□□ -0.11
ATG4B-219ENST00000479941 MRS2Q9HD23 443 aa14.34□□□□□ -0.11
ATG4B-219ENST00000479941 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
ATG4B-219ENST00000479941 NFATC2IPQ8NCF5 419 aa14.33□□□□□ -0.12
ATG4B-219ENST00000479941 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.12
ATG4B-219ENST00000479941 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.12
ATG4B-219ENST00000479941 ITGB4P16144 1822 aa14.33□□□□□ -0.12
ATG4B-219ENST00000479941 HMGB2P26583 209 aaKnown RBP14.32□□□□□ -0.12
ATG4B-219ENST00000479941 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
ATG4B-219ENST00000479941 SLC27A3Q5K4L6 730 aa14.32□□□□□ -0.12
ATG4B-219ENST00000479941 RUNDC1Q96C34 613 aa14.32□□□□□ -0.12
ATG4B-219ENST00000479941 PALLDQ8WX93 1383 aa14.32□□□□□ -0.12
ATG4B-219ENST00000479941 SCN11AQ9UI33 1791 aa14.32□□□□□ -0.12
ATG4B-219ENST00000479941 RREB1Q92766 1687 aa14.31□□□□□ -0.12
ATG4B-219ENST00000479941 ADAMTS7Q9UKP4 1686 aa14.31□□□□□ -0.12
ATG4B-219ENST00000479941 NBPF14Q5TI25 921 aa14.31□□□□□ -0.12
ATG4B-219ENST00000479941 DIEXFQ68CQ4 756 aaKnown RBP14.31□□□□□ -0.12
ATG4B-219ENST00000479941 IL17REQ8NFR9 667 aa14.31□□□□□ -0.12
ATG4B-219ENST00000479941 PNISRQ8TF01 805 aaKnown RBP14.31□□□□□ -0.12
ATG4B-219ENST00000479941 TEFQ10587 303 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms