RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739		E9PSI1	815 aa		11.67	□□□□□ -0.54
SH3YL1-222	ENST00000479739	CARD14	Q9BXL6	1004 aa		11.67	□□□□□ -0.54
SH3YL1-222	ENST00000479739	CGNL1	Q0VF96	1302 aa		11.66	□□□□□ -0.54
SH3YL1-222	ENST00000479739	AXIN2	Q9Y2T1	843 aa		11.66	□□□□□ -0.54
SH3YL1-222	ENST00000479739	CCDC9	Q9Y3X0	531 aa	Known RBP	11.66	□□□□□ -0.54
SH3YL1-222	ENST00000479739	MAPK8IP3	Q9UPT6	1336 aa		11.66	□□□□□ -0.54
SH3YL1-222	ENST00000479739	FYB1	O15117	783 aa		11.66	□□□□□ -0.54
SH3YL1-222	ENST00000479739	PDE3A	Q14432	1141 aa		11.65	□□□□□ -0.54
SH3YL1-222	ENST00000479739	LARP1	Q6PKG0	1096 aa	Known RBP	11.65	□□□□□ -0.54
SH3YL1-222	ENST00000479739	STRN4	Q9NRL3	753 aa		11.65	□□□□□ -0.54
SH3YL1-222	ENST00000479739	NSD3	Q9BZ95	1437 aa		11.65	□□□□□ -0.54
SH3YL1-222	ENST00000479739	SOX12	O15370	315 aa		11.64	□□□□□ -0.55
SH3YL1-222	ENST00000479739	SEPT12	Q8IYM1	358 aa		11.64	□□□□□ -0.55
SH3YL1-222	ENST00000479739	CRB1	P82279	1406 aa		11.64	□□□□□ -0.55
SH3YL1-222	ENST00000479739	FAM98C	Q17RN3	349 aa	Known RBP	11.64	□□□□□ -0.55
SH3YL1-222	ENST00000479739	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
SH3YL1-222	ENST00000479739	COG3	Q96JB2	828 aa		11.64	□□□□□ -0.55
SH3YL1-222	ENST00000479739	EVA1C	P58658	441 aa		11.63	□□□□□ -0.55
SH3YL1-222	ENST00000479739	WNK3	Q9BYP7	1800 aa		11.63	□□□□□ -0.55
SH3YL1-222	ENST00000479739	BARGIN	Q6ZT62	677 aa		11.63	□□□□□ -0.55
SH3YL1-222	ENST00000479739	WDR17	Q8IZU2	1322 aa		11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	PARP4	Q9UKK3	1724 aa	Known RBP	11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	ANKRD26	Q9UPS8	1709 aa		11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	ZBTB7C	A1YPR0	619 aa		11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	BECN1	Q14457	450 aa		11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	FRAT1	Q92837	279 aa	Predicted RBP	11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	GGNBP2	Q9H3C7	697 aa		11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	SKAP1	Q86WV1	359 aa		11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	THRAP3	Q9Y2W1	955 aa	Known RBP	11.62	□□□□□ -0.55
SH3YL1-222	ENST00000479739	RGS3	P49796	1198 aa		11.6	□□□□□ -0.55
SH3YL1-222	ENST00000479739	TCP11L2	Q8N4U5	519 aa		11.6	□□□□□ -0.55
SH3YL1-222	ENST00000479739	ERBB3	P21860	1342 aa		11.6	□□□□□ -0.55
SH3YL1-222	ENST00000479739	MAP3K19	Q56UN5	1328 aa		11.6	□□□□□ -0.55
SH3YL1-222	ENST00000479739	FBLN1	P23142	703 aa		11.6	□□□□□ -0.55
SH3YL1-222	ENST00000479739	FAM208A	Q9UK61	1670 aa	Known RBP	11.59	□□□□□ -0.55
SH3YL1-222	ENST00000479739	SLC4A3	P48751	1232 aa		11.59	□□□□□ -0.55
SH3YL1-222	ENST00000479739	KRT27	Q7Z3Y8	459 aa		11.59	□□□□□ -0.55
SH3YL1-222	ENST00000479739	IP6K1	Q92551	441 aa		11.59	□□□□□ -0.55
SH3YL1-222	ENST00000479739	PEAK1	Q9H792	1746 aa		11.59	□□□□□ -0.55
SH3YL1-222	ENST00000479739	APAF1	O14727	1248 aa		11.59	□□□□□ -0.55
SH3YL1-222	ENST00000479739	CARD10	Q9BWT7	1032 aa		11.59	□□□□□ -0.55
SH3YL1-222	ENST00000479739	LRRC37A3	O60309	1634 aa		11.59	□□□□□ -0.55
SH3YL1-222	ENST00000479739	RTL1	A6NKG5	1358 aa		11.58	□□□□□ -0.56
SH3YL1-222	ENST00000479739	DISP2	A7MBM2	1401 aa		11.58	□□□□□ -0.56
SH3YL1-222	ENST00000479739	TOM1L2	Q6ZVM7	507 aa		11.58	□□□□□ -0.56
SH3YL1-222	ENST00000479739	CLUAP1	Q96AJ1	413 aa		11.58	□□□□□ -0.56
SH3YL1-222	ENST00000479739	NCBP3	Q53F19	620 aa	Known RBP	11.58	□□□□□ -0.56
SH3YL1-222	ENST00000479739	RTN4	Q9NQC3	1192 aa	Known RBP	11.58	□□□□□ -0.56
SH3YL1-222	ENST00000479739		A0A0G2JS52	829 aa		11.57	□□□□□ -0.56
SH3YL1-222	ENST00000479739	FRAT2	O75474	233 aa	Predicted RBP	11.57	□□□□□ -0.56
SH3YL1-222	ENST00000479739	HOXC9	P31274	260 aa		11.57	□□□□□ -0.56
SH3YL1-222	ENST00000479739	UPF2	Q9HAU5	1272 aa	Known RBP	11.57	□□□□□ -0.56
SH3YL1-222	ENST00000479739	BRPF3	Q9ULD4	1205 aa		11.57	□□□□□ -0.56
SH3YL1-222	ENST00000479739	KIF24	Q5T7B8	1368 aa		11.57	□□□□□ -0.56
SH3YL1-222	ENST00000479739	MAP2	P11137	1827 aa	Known RBP	11.57	□□□□□ -0.56
SH3YL1-222	ENST00000479739	RRS1	Q15050	365 aa	Known RBP	11.56	□□□□□ -0.56
SH3YL1-222	ENST00000479739	FAM43A	Q8N2R8	423 aa		11.56	□□□□□ -0.56
SH3YL1-222	ENST00000479739	NSD2	O96028	1365 aa		11.56	□□□□□ -0.56
SH3YL1-222	ENST00000479739	RGPD2	P0DJD1	1756 aa		11.56	□□□□□ -0.56
SH3YL1-222	ENST00000479739	BCAR3	O75815	825 aa		11.56	□□□□□ -0.56
SH3YL1-222	ENST00000479739	CCDC146	Q8IYE0	955 aa		11.56	□□□□□ -0.56
SH3YL1-222	ENST00000479739	ANKRD24	Q8TF21	1146 aa		11.56	□□□□□ -0.56
SH3YL1-222	ENST00000479739	PODXL2	Q9NZ53	605 aa		11.56	□□□□□ -0.56
SH3YL1-222	ENST00000479739	CSB-PGBD3	P0DP91	1061 aa		11.55	□□□□□ -0.56
SH3YL1-222	ENST00000479739	CANX	P27824	592 aa	Known RBP	11.55	□□□□□ -0.56
SH3YL1-222	ENST00000479739	L1TD1	Q5T7N2	865 aa	Known RBP	11.55	□□□□□ -0.56
SH3YL1-222	ENST00000479739	CCDC125	Q86Z20	511 aa		11.55	□□□□□ -0.56
SH3YL1-222	ENST00000479739	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.55	□□□□□ -0.56
SH3YL1-222	ENST00000479739	FLT4	P35916	1363 aa		11.54	□□□□□ -0.56
SH3YL1-222	ENST00000479739	IGHD	P01880	384 aa		11.54	□□□□□ -0.56
SH3YL1-222	ENST00000479739	AMPH	P49418	695 aa		11.54	□□□□□ -0.56
SH3YL1-222	ENST00000479739	WWC1	Q8IX03	1113 aa		11.54	□□□□□ -0.56
SH3YL1-222	ENST00000479739	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.54	□□□□□ -0.56
SH3YL1-222	ENST00000479739	RGPD1	P0DJD0	1748 aa		11.53	□□□□□ -0.56
SH3YL1-222	ENST00000479739	TNS1	Q9HBL0	1735 aa	Known RBP	11.53	□□□□□ -0.56
SH3YL1-222	ENST00000479739	FAM182B	Q5T319	152 aa		11.53	□□□□□ -0.56
SH3YL1-222	ENST00000479739	WDR63	Q8IWG1	891 aa		11.53	□□□□□ -0.56
SH3YL1-222	ENST00000479739	EMILIN1	Q9Y6C2	1016 aa		11.53	□□□□□ -0.56
SH3YL1-222	ENST00000479739	NLRP2	Q9NX02	1062 aa		11.52	□□□□□ -0.56
SH3YL1-222	ENST00000479739	TNS2	Q63HR2	1409 aa		11.52	□□□□□ -0.57
SH3YL1-222	ENST00000479739	CCDC27	Q2M243	656 aa		11.52	□□□□□ -0.57
SH3YL1-222	ENST00000479739	HSP90AB2P	Q58FF8	381 aa		11.52	□□□□□ -0.57
SH3YL1-222	ENST00000479739	RSPH6A	Q9H0K4	717 aa		11.52	□□□□□ -0.57
SH3YL1-222	ENST00000479739	SBF2	Q86WG5	1849 aa		11.52	□□□□□ -0.57
SH3YL1-222	ENST00000479739	DDB1	Q16531	1140 aa		11.51	□□□□□ -0.57
SH3YL1-222	ENST00000479739	RUNDC1	Q96C34	613 aa		11.51	□□□□□ -0.57
SH3YL1-222	ENST00000479739	POLK	Q9UBT6	870 aa		11.51	□□□□□ -0.57
SH3YL1-222	ENST00000479739	FAM196A	Q6ZSG2	479 aa		11.51	□□□□□ -0.57
SH3YL1-222	ENST00000479739	LTV1	Q96GA3	475 aa	Predicted RBP	11.51	□□□□□ -0.57
SH3YL1-222	ENST00000479739	BCL9	O00512	1426 aa		11.51	□□□□□ -0.57
SH3YL1-222	ENST00000479739	RWDD1	Q9H446	243 aa	Predicted RBP	11.5	□□□□□ -0.57
SH3YL1-222	ENST00000479739	COG6	Q9Y2V7	657 aa		11.5	□□□□□ -0.57
SH3YL1-222	ENST00000479739	OVOS2	A0A0G2JMS6	1433 aa		11.5	□□□□□ -0.57
SH3YL1-222	ENST00000479739	NCAPD2	Q15021	1401 aa		11.5	□□□□□ -0.57
SH3YL1-222	ENST00000479739	CT47B1	P0C2W7	299 aa	Predicted RBP	11.5	□□□□□ -0.57
SH3YL1-222	ENST00000479739	IL2RB	P14784	551 aa		11.5	□□□□□ -0.57
SH3YL1-222	ENST00000479739	RARS	P54136	660 aa	Known RBP	11.5	□□□□□ -0.57
SH3YL1-222	ENST00000479739	SHANK3	Q9BYB0	1731 aa		11.5	□□□□□ -0.57
SH3YL1-222	ENST00000479739	NBPF6	Q5VWK0	638 aa		11.49	□□□□□ -0.57
SH3YL1-222	ENST00000479739	MARCH10	Q8NA82	808 aa	Predicted RBP	11.49	□□□□□ -0.57

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