RNA–Protein interactions for RNA: ENST00000479692.2

CDKN2A-205, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 5 BASIC

Gene CDKN2A, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-205ENST00000479692 KDRP35968 1356 aa27.44■■□□□ 1.98
CDKN2A-205ENST00000479692 EXOC5O00471 708 aa27.43■■□□□ 1.98
CDKN2A-205ENST00000479692 DDB1Q16531 1140 aa27.42■■□□□ 1.98
CDKN2A-205ENST00000479692 RSPH6AQ9H0K4 717 aa27.42■■□□□ 1.98
CDKN2A-205ENST00000479692 PDE3BQ13370 1112 aa27.41■■□□□ 1.98
CDKN2A-205ENST00000479692 NCAPD2Q15021 1401 aa27.41■■□□□ 1.98
CDKN2A-205ENST00000479692 PLEKHG2Q9H7P9 1386 aa27.4■■□□□ 1.98
CDKN2A-205ENST00000479692 ZCRB1Q8TBF4 217 aaKnown RBP27.4■■□□□ 1.98
CDKN2A-205ENST00000479692 SEPT12Q8IYM1 358 aa27.39■■□□□ 1.98
CDKN2A-205ENST00000479692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.39■■□□□ 1.98
CDKN2A-205ENST00000479692 C1orf141Q5JVX7 400 aa27.38■■□□□ 1.97
CDKN2A-205ENST00000479692 GAS2L2Q8NHY3 880 aa27.38■■□□□ 1.97
CDKN2A-205ENST00000479692 RUNDC1Q96C34 613 aa27.38■■□□□ 1.97
CDKN2A-205ENST00000479692 RGPD1P0DJD0 1748 aa27.38■■□□□ 1.97
CDKN2A-205ENST00000479692 OVOS2A0A0G2JMS6 1433 aa27.37■■□□□ 1.97
CDKN2A-205ENST00000479692 ONECUT3O60422 494 aaPredicted RBP27.36■■□□□ 1.97
CDKN2A-205ENST00000479692 CCDC146Q8IYE0 955 aa27.36■■□□□ 1.97
CDKN2A-205ENST00000479692 PCDH11XQ9BZA7 1347 aa27.36■■□□□ 1.97
CDKN2A-205ENST00000479692 PCDH11YQ9BZA8 1340 aa27.36■■□□□ 1.97
CDKN2A-205ENST00000479692 MEGF6O75095 1541 aa27.36■■□□□ 1.97
CDKN2A-205ENST00000479692 GLI3P10071 1580 aa27.35■■□□□ 1.97
CDKN2A-205ENST00000479692 RGPD2P0DJD1 1756 aa27.35■■□□□ 1.97
CDKN2A-205ENST00000479692 RGS12O14924 1447 aa27.35■■□□□ 1.97
CDKN2A-205ENST00000479692 ZNF530Q6P9A1 599 aaPredicted RBP27.35■■□□□ 1.97
CDKN2A-205ENST00000479692 DDX54Q8TDD1 881 aaKnown RBP27.35■■□□□ 1.97
CDKN2A-205ENST00000479692 DISP2A7MBM2 1401 aa27.34■■□□□ 1.97
CDKN2A-205ENST00000479692 PARP4Q9UKK3 1724 aaKnown RBP27.32■■□□□ 1.96
CDKN2A-205ENST00000479692 HSP90AB1P08238 724 aaKnown RBP27.31■■□□□ 1.96
CDKN2A-205ENST00000479692 IFNL2Q8IZJ0 200 aa27.31■■□□□ 1.96
CDKN2A-205ENST00000479692 TNS2Q63HR2 1409 aa27.31■■□□□ 1.96
CDKN2A-205ENST00000479692 RTF1Q92541 710 aaKnown RBP27.29■■□□□ 1.96
CDKN2A-205ENST00000479692 PHACTR3Q96KR7 559 aa27.29■■□□□ 1.96
CDKN2A-205ENST00000479692 PLEKHF1Q96S99 279 aa27.29■■□□□ 1.96
CDKN2A-205ENST00000479692 LMOD3Q0VAK6 560 aa27.28■■□□□ 1.96
CDKN2A-205ENST00000479692 MTHFSDQ2M296 383 aaKnown RBP27.28■■□□□ 1.96
CDKN2A-205ENST00000479692 KRT27Q7Z3Y8 459 aa27.28■■□□□ 1.96
CDKN2A-205ENST00000479692 NFE2L2Q16236 605 aa27.27■■□□□ 1.96
CDKN2A-205ENST00000479692 AKAP4Q5JQC9 854 aa27.27■■□□□ 1.96
CDKN2A-205ENST00000479692 GNAT3A8MTJ3 354 aa27.25■■□□□ 1.95
CDKN2A-205ENST00000479692 NEUROD2Q15784 382 aa27.25■■□□□ 1.95
CDKN2A-205ENST00000479692 APAF1O14727 1248 aa27.24■■□□□ 1.95
CDKN2A-205ENST00000479692 PHKG2P15735 406 aa27.24■■□□□ 1.95
CDKN2A-205ENST00000479692 THSD7AQ9UPZ6 1657 aa27.24■■□□□ 1.95
CDKN2A-205ENST00000479692 RIPK4P57078 832 aa27.23■■□□□ 1.95
CDKN2A-205ENST00000479692 BRWD3Q6RI45 1802 aa27.23■■□□□ 1.95
CDKN2A-205ENST00000479692 TMPOP42166 694 aaKnown RBP27.22■■□□□ 1.95
CDKN2A-205ENST00000479692 WNK3Q9BYP7 1800 aa27.22■■□□□ 1.95
CDKN2A-205ENST00000479692 MAP3K5Q99683 1374 aa27.22■■□□□ 1.95
CDKN2A-205ENST00000479692 CYP27B1O15528 508 aa27.21■■□□□ 1.95
CDKN2A-205ENST00000479692 NGEFQ8N5V2 710 aa27.21■■□□□ 1.95
CDKN2A-205ENST00000479692 DCAF5Q96JK2 942 aa27.21■■□□□ 1.95
CDKN2A-205ENST00000479692 LRRC37A3O60309 1634 aa27.2■■□□□ 1.95
CDKN2A-205ENST00000479692 MARCH10Q8NA82 808 aaPredicted RBP27.2■■□□□ 1.94
CDKN2A-205ENST00000479692 RRP7AQ9Y3A4 280 aaKnown RBP27.2■■□□□ 1.94
CDKN2A-205ENST00000479692 HTATSF1O43719 755 aaKnown RBP27.19■■□□□ 1.94
CDKN2A-205ENST00000479692 FAM196AQ6ZSG2 479 aa27.19■■□□□ 1.94
CDKN2A-205ENST00000479692 UPF1Q92900 1129 aaKnown RBP eCLIP27.18■■□□□ 1.94
CDKN2A-205ENST00000479692 MPRIPQ6WCQ1 1025 aa27.17■■□□□ 1.94
CDKN2A-205ENST00000479692 PKD1L3Q7Z443 1732 aa27.16■■□□□ 1.94
CDKN2A-205ENST00000479692 CALD1Q05682 793 aaKnown RBP27.16■■□□□ 1.94
CDKN2A-205ENST00000479692 TEFQ10587 303 aa27.15■■□□□ 1.94
CDKN2A-205ENST00000479692 NKX1-1Q15270 411 aaPredicted RBP27.15■■□□□ 1.94
CDKN2A-205ENST00000479692 SYTL4Q96C24 671 aaPredicted RBP27.15■■□□□ 1.94
CDKN2A-205ENST00000479692 SALL2Q9Y467 1007 aaPredicted RBP27.14■■□□□ 1.94
CDKN2A-205ENST00000479692 CABP4P57796 275 aa27.13■■□□□ 1.93
CDKN2A-205ENST00000479692 HNRNPUQ00839 825 aaKnown RBP eCLIP27.13■■□□□ 1.93
CDKN2A-205ENST00000479692 FAM182BQ5T319 152 aa27.12■■□□□ 1.93
CDKN2A-205ENST00000479692 ERVV-2B6SEH9 535 aa27.11■■□□□ 1.93
CDKN2A-205ENST00000479692 RNMTO43148 476 aaKnown RBP27.11■■□□□ 1.93
CDKN2A-205ENST00000479692 NCBP3Q53F19 620 aaKnown RBP27.11■■□□□ 1.93
CDKN2A-205ENST00000479692 SENP3-EIF4A1A0A087X0R7 540 aa27.1■■□□□ 1.93
CDKN2A-205ENST00000479692 MCM10Q7L590 875 aa27.1■■□□□ 1.93
CDKN2A-205ENST00000479692 TMOD3Q9NYL9 352 aa27.1■■□□□ 1.93
CDKN2A-205ENST00000479692 ACSBG1Q96GR2 724 aa27.09■■□□□ 1.93
CDKN2A-205ENST00000479692 CCDC27Q2M243 656 aa27.08■■□□□ 1.93
CDKN2A-205ENST00000479692 PRIM1P49642 420 aaKnown RBP27.06■■□□□ 1.92
CDKN2A-205ENST00000479692 DCTN1Q14203 1278 aa27.06■■□□□ 1.92
CDKN2A-205ENST00000479692 LGR6Q9HBX8 967 aa27.06■■□□□ 1.92
CDKN2A-205ENST00000479692 BCL9O00512 1426 aa27.06■■□□□ 1.92
CDKN2A-205ENST00000479692 SF3B2Q13435 895 aaKnown RBP27.05■■□□□ 1.92
CDKN2A-205ENST00000479692 IL17REQ8NFR9 667 aa27.05■■□□□ 1.92
CDKN2A-205ENST00000479692 SLC52A2Q9HAB3 445 aa27.04■■□□□ 1.92
CDKN2A-205ENST00000479692 TRIM35Q9UPQ4 493 aa27.04■■□□□ 1.92
CDKN2A-205ENST00000479692 EP400Q96L91 3159 aa27.04■■□□□ 1.92
CDKN2A-205ENST00000479692 KDM6AO15550 1401 aaPredicted RBP27.03■■□□□ 1.92
CDKN2A-205ENST00000479692 WWC1Q8IX03 1113 aa27.03■■□□□ 1.92
CDKN2A-205ENST00000479692 NFATC2IPQ8NCF5 419 aa27.03■■□□□ 1.92
CDKN2A-205ENST00000479692 YTHDC1Q96MU7 727 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-205ENST00000479692 THUMPD2Q9BTF0 503 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-205ENST00000479692 LAS1LQ9Y4W2 734 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-205ENST00000479692 SHANK3Q9BYB0 1731 aa27.02■■□□□ 1.92
CDKN2A-205ENST00000479692 TRIM37O94972 964 aa27.01■■□□□ 1.91
CDKN2A-205ENST00000479692 TAF7Q15545 349 aaPredicted RBP27.01■■□□□ 1.91
CDKN2A-205ENST00000479692 BCL11BQ9C0K0 894 aaPredicted RBP27.01■■□□□ 1.91
CDKN2A-205ENST00000479692 CEMIPQ8WUJ3 1361 aa27■■□□□ 1.91
CDKN2A-205ENST00000479692 WDR63Q8IWG1 891 aa27■■□□□ 1.91
CDKN2A-205ENST00000479692 TTC5Q8N0Z6 440 aa27■■□□□ 1.91
CDKN2A-205ENST00000479692 BTBD11A6QL63 1104 aa26.99■■□□□ 1.91
CDKN2A-205ENST00000479692 KCNQ2O43526 872 aa26.97■■□□□ 1.91
CDKN2A-205ENST00000479692 GNAI1P63096 354 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms