RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 TMF1P82094 1093 aa18.66■□□□□ 0.58
ABCF1-206ENST00000479542 CDCA8Q53HL2 280 aa18.66■□□□□ 0.58
ABCF1-206ENST00000479542 ZNF784Q8NCA9 323 aaPredicted RBP18.65■□□□□ 0.58
ABCF1-206ENST00000479542 LTV1Q96GA3 475 aaPredicted RBP18.65■□□□□ 0.58
ABCF1-206ENST00000479542 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
ABCF1-206ENST00000479542 NSD2O96028 1365 aa18.65■□□□□ 0.58
ABCF1-206ENST00000479542 POLD1P28340 1107 aa18.64■□□□□ 0.57
ABCF1-206ENST00000479542 CHD4Q14839 1912 aa18.64■□□□□ 0.57
ABCF1-206ENST00000479542 LY75O60449 1722 aa18.63■□□□□ 0.57
ABCF1-206ENST00000479542 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
ABCF1-206ENST00000479542 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
ABCF1-206ENST00000479542 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
ABCF1-206ENST00000479542 INSRP06213 1382 aa18.62■□□□□ 0.57
ABCF1-206ENST00000479542 MEGF6O75095 1541 aa18.62■□□□□ 0.57
ABCF1-206ENST00000479542 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
ABCF1-206ENST00000479542 FBLN1P23142 703 aa18.61■□□□□ 0.57
ABCF1-206ENST00000479542 RAPGEF4Q8WZA2 1011 aa18.61■□□□□ 0.57
ABCF1-206ENST00000479542 SHANK3Q9BYB0 1731 aa18.6■□□□□ 0.57
ABCF1-206ENST00000479542 SYTL4Q96C24 671 aaPredicted RBP18.6■□□□□ 0.57
ABCF1-206ENST00000479542 USP47Q96K76 1375 aa18.59■□□□□ 0.57
ABCF1-206ENST00000479542 RRS1Q15050 365 aaKnown RBP18.59■□□□□ 0.57
ABCF1-206ENST00000479542 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
ABCF1-206ENST00000479542 FLT4P35916 1363 aa18.58■□□□□ 0.57
ABCF1-206ENST00000479542 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
ABCF1-206ENST00000479542 FLAD1Q8NFF5 587 aa18.58■□□□□ 0.56
ABCF1-206ENST00000479542 GGNBP2Q9H3C7 697 aa18.58■□□□□ 0.56
ABCF1-206ENST00000479542 CCNL1Q9UK58 526 aaPredicted RBP18.58■□□□□ 0.56
ABCF1-206ENST00000479542 DOT1LQ8TEK3 1739 aa18.57■□□□□ 0.56
ABCF1-206ENST00000479542 PCDH11XQ9BZA7 1347 aa18.57■□□□□ 0.56
ABCF1-206ENST00000479542 PCDH11YQ9BZA8 1340 aa18.57■□□□□ 0.56
ABCF1-206ENST00000479542 RGPD2P0DJD1 1756 aa18.57■□□□□ 0.56
ABCF1-206ENST00000479542 GPR162Q16538 588 aa18.56■□□□□ 0.56
ABCF1-206ENST00000479542 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
ABCF1-206ENST00000479542 NCAPD2Q15021 1401 aa18.55■□□□□ 0.56
ABCF1-206ENST00000479542 NKX1-1Q15270 411 aaPredicted RBP18.54■□□□□ 0.56
ABCF1-206ENST00000479542 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
ABCF1-206ENST00000479542 TUBGCP6Q96RT7 1819 aa18.53■□□□□ 0.56
ABCF1-206ENST00000479542 GRIN3BO60391 1043 aa18.53■□□□□ 0.56
ABCF1-206ENST00000479542 KCNQ4P56696 695 aa18.53■□□□□ 0.56
ABCF1-206ENST00000479542 SMARCC1Q92922 1105 aaPredicted RBP18.53■□□□□ 0.56
ABCF1-206ENST00000479542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56
ABCF1-206ENST00000479542 PLEKHG2Q9H7P9 1386 aa18.53■□□□□ 0.56
ABCF1-206ENST00000479542 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.56
ABCF1-206ENST00000479542 GOLGB1Q14789 3259 aaKnown RBP18.51■□□□□ 0.55
ABCF1-206ENST00000479542 CYP27B1O15528 508 aa18.51■□□□□ 0.55
ABCF1-206ENST00000479542 CD2APQ9Y5K6 639 aa18.51■□□□□ 0.55
ABCF1-206ENST00000479542 WASHC2AQ641Q2 1341 aa18.5■□□□□ 0.55
ABCF1-206ENST00000479542 C1QTNF8P60827 252 aa18.5■□□□□ 0.55
ABCF1-206ENST00000479542 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
ABCF1-206ENST00000479542 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
ABCF1-206ENST00000479542 PALLDQ8WX93 1383 aa18.49■□□□□ 0.55
ABCF1-206ENST00000479542 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
ABCF1-206ENST00000479542 CLSPNQ9HAW4 1339 aa18.49■□□□□ 0.55
ABCF1-206ENST00000479542 NLGN2Q8NFZ4 835 aa18.48■□□□□ 0.55
ABCF1-206ENST00000479542 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
ABCF1-206ENST00000479542 NSD3Q9BZ95 1437 aa18.48■□□□□ 0.55
ABCF1-206ENST00000479542 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
ABCF1-206ENST00000479542 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
ABCF1-206ENST00000479542 EMILIN1Q9Y6C2 1016 aa18.46■□□□□ 0.55
ABCF1-206ENST00000479542 C5P01031 1676 aa18.46■□□□□ 0.55
ABCF1-206ENST00000479542 TAF1LQ8IZX4 1826 aa18.45■□□□□ 0.54
ABCF1-206ENST00000479542 MSH5O43196 834 aa18.45■□□□□ 0.54
ABCF1-206ENST00000479542 ANKRD26Q9UPS8 1709 aa18.45■□□□□ 0.54
ABCF1-206ENST00000479542 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
ABCF1-206ENST00000479542 PIGBQ92521 554 aa18.44■□□□□ 0.54
ABCF1-206ENST00000479542 SSFA2P28290 1259 aa18.43■□□□□ 0.54
ABCF1-206ENST00000479542 EYA1Q99502 592 aa18.43■□□□□ 0.54
ABCF1-206ENST00000479542 ITGB4P16144 1822 aa18.42■□□□□ 0.54
ABCF1-206ENST00000479542 YBX3P16989 372 aaKnown RBP eCLIP18.42■□□□□ 0.54
ABCF1-206ENST00000479542 POLKQ9UBT6 870 aa18.42■□□□□ 0.54
ABCF1-206ENST00000479542 C4BP0C0L5 1744 aa18.41■□□□□ 0.54
ABCF1-206ENST00000479542 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
ABCF1-206ENST00000479542 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
ABCF1-206ENST00000479542 AK7Q96M32 723 aa18.41■□□□□ 0.54
ABCF1-206ENST00000479542 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
ABCF1-206ENST00000479542 SIK1P57059 783 aa18.4■□□□□ 0.54
ABCF1-206ENST00000479542 TOGARAM1Q9Y4F4 1720 aa18.4■□□□□ 0.54
ABCF1-206ENST00000479542 MAP2P11137 1827 aaKnown RBP18.39■□□□□ 0.54
ABCF1-206ENST00000479542 PELP1Q8IZL8 1130 aaKnown RBP18.39■□□□□ 0.53
ABCF1-206ENST00000479542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.38■□□□□ 0.53
ABCF1-206ENST00000479542 PHKG2P15735 406 aa18.38■□□□□ 0.53
ABCF1-206ENST00000479542 MSL1Q68DK7 614 aa18.38■□□□□ 0.53
ABCF1-206ENST00000479542 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
ABCF1-206ENST00000479542 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
ABCF1-206ENST00000479542 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
ABCF1-206ENST00000479542 PPM1GO15355 546 aaPredicted RBP18.37■□□□□ 0.53
ABCF1-206ENST00000479542 ERVV-2B6SEH9 535 aa18.36■□□□□ 0.53
ABCF1-206ENST00000479542 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
ABCF1-206ENST00000479542 AMIGO3Q86WK7 504 aa18.35■□□□□ 0.53
ABCF1-206ENST00000479542 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
ABCF1-206ENST00000479542 IGSF1Q8N6C5 1336 aa18.34■□□□□ 0.53
ABCF1-206ENST00000479542 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
ABCF1-206ENST00000479542 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
ABCF1-206ENST00000479542 LINC00116Q8NCU8 138 aa18.34■□□□□ 0.53
ABCF1-206ENST00000479542 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
ABCF1-206ENST00000479542 ASAP1Q9ULH1 1129 aa18.34■□□□□ 0.53
ABCF1-206ENST00000479542 ADCY9O60503 1353 aa18.33■□□□□ 0.53
ABCF1-206ENST00000479542 ATP6V1AP38606 617 aa18.33■□□□□ 0.52
ABCF1-206ENST00000479542 ADRA2BP18089 450 aa18.32■□□□□ 0.52
ABCF1-206ENST00000479542 ITPK1Q13572 414 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms