RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-211ENST00000478848 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
FMR1-211ENST00000478848 POLR3AO14802 1390 aaPredicted RBP12.78□□□□□ -0.36
FMR1-211ENST00000478848 PPIP5K1Q6PFW1 1433 aa12.78□□□□□ -0.36
FMR1-211ENST00000478848 SPATA31E1Q6ZUB1 1445 aa12.78□□□□□ -0.36
FMR1-211ENST00000478848 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
FMR1-211ENST00000478848 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
FMR1-211ENST00000478848 ABCC6O95255 1503 aa12.77□□□□□ -0.37
FMR1-211ENST00000478848 NLRP6P59044 892 aa12.76□□□□□ -0.37
FMR1-211ENST00000478848 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
FMR1-211ENST00000478848 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
FMR1-211ENST00000478848 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
FMR1-211ENST00000478848 SMIM5Q71RC9 77 aa12.75□□□□□ -0.37
FMR1-211ENST00000478848 CCDC7Q96M83 1385 aa12.75□□□□□ -0.37
FMR1-211ENST00000478848 COL18A1P39060 1754 aa12.74□□□□□ -0.37
FMR1-211ENST00000478848 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
FMR1-211ENST00000478848 PIK3C2AO00443 1686 aa12.73□□□□□ -0.37
FMR1-211ENST00000478848 TNRC18O15417 2968 aaPredicted RBP12.73□□□□□ -0.37
FMR1-211ENST00000478848 PXDNLA1KZ92 1463 aa12.73□□□□□ -0.37
FMR1-211ENST00000478848 A0A0G2JLW4 131 aa12.73□□□□□ -0.37
FMR1-211ENST00000478848 SOX12O15370 315 aa12.73□□□□□ -0.37
FMR1-211ENST00000478848 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
FMR1-211ENST00000478848 CDK19Q9BWU1 502 aa12.73□□□□□ -0.37
FMR1-211ENST00000478848 RNF181Q9P0P0 153 aa12.73□□□□□ -0.37
FMR1-211ENST00000478848 FCHSD2O94868 740 aa12.72□□□□□ -0.37
FMR1-211ENST00000478848 IL2RBP14784 551 aa12.72□□□□□ -0.37
FMR1-211ENST00000478848 FLAD1Q8NFF5 587 aa12.72□□□□□ -0.37
FMR1-211ENST00000478848 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
FMR1-211ENST00000478848 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
FMR1-211ENST00000478848 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.37
FMR1-211ENST00000478848 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.37
FMR1-211ENST00000478848 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
FMR1-211ENST00000478848 RGPD5Q99666 1765 aa12.71□□□□□ -0.38
FMR1-211ENST00000478848 ARHGEF25Q86VW2 580 aa12.7□□□□□ -0.38
FMR1-211ENST00000478848 NLRP2Q9NX02 1062 aa12.7□□□□□ -0.38
FMR1-211ENST00000478848 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
FMR1-211ENST00000478848 ERBB3P21860 1342 aa12.69□□□□□ -0.38
FMR1-211ENST00000478848 PHF14O94880 888 aa12.69□□□□□ -0.38
FMR1-211ENST00000478848 HSPA8P11142 646 aaKnown RBP12.69□□□□□ -0.38
FMR1-211ENST00000478848 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
FMR1-211ENST00000478848 SLIT3O75094 1523 aa12.68□□□□□ -0.38
FMR1-211ENST00000478848 VEGFAP15692 232 aaPredicted RBP12.68□□□□□ -0.38
FMR1-211ENST00000478848 CNTNAP1P78357 1384 aa12.68□□□□□ -0.38
FMR1-211ENST00000478848 AMIGO3Q86WK7 504 aa12.67□□□□□ -0.38
FMR1-211ENST00000478848 LY75O60449 1722 aa12.67□□□□□ -0.38
FMR1-211ENST00000478848 PKD1L3Q7Z443 1732 aa12.67□□□□□ -0.38
FMR1-211ENST00000478848 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
FMR1-211ENST00000478848 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
FMR1-211ENST00000478848 DPEP1P16444 411 aa12.66□□□□□ -0.38
FMR1-211ENST00000478848 VEGFBP49765 207 aa12.66□□□□□ -0.38
FMR1-211ENST00000478848 TGFB2P61812 414 aa12.66□□□□□ -0.38
FMR1-211ENST00000478848 NSD2O96028 1365 aa12.66□□□□□ -0.38
FMR1-211ENST00000478848 ADGRB1O14514 1584 aa12.65□□□□□ -0.38
FMR1-211ENST00000478848 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
FMR1-211ENST00000478848 MMP10P09238 476 aa12.64□□□□□ -0.39
FMR1-211ENST00000478848 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
FMR1-211ENST00000478848 USP47Q96K76 1375 aa12.64□□□□□ -0.39
FMR1-211ENST00000478848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
FMR1-211ENST00000478848 AK7Q96M32 723 aa12.63□□□□□ -0.39
FMR1-211ENST00000478848 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
FMR1-211ENST00000478848 PRPF38BQ5VTL8 546 aaKnown RBP12.62□□□□□ -0.39
FMR1-211ENST00000478848 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
FMR1-211ENST00000478848 C5P01031 1676 aa12.61□□□□□ -0.39
FMR1-211ENST00000478848 KIAA1551Q9HCM1 1747 aa12.6□□□□□ -0.39
FMR1-211ENST00000478848 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
FMR1-211ENST00000478848 QRICH2Q9H0J4 1663 aa12.59□□□□□ -0.39
FMR1-211ENST00000478848 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
FMR1-211ENST00000478848 CUL9Q8IWT3 2517 aa12.59□□□□□ -0.39
FMR1-211ENST00000478848 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
FMR1-211ENST00000478848 SRPK2P78362 688 aaKnown RBP12.58□□□□□ -0.4
FMR1-211ENST00000478848 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
FMR1-211ENST00000478848 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
FMR1-211ENST00000478848 POTECB2RU33 542 aa12.57□□□□□ -0.4
FMR1-211ENST00000478848 KCNA3P22001 575 aa12.57□□□□□ -0.4
FMR1-211ENST00000478848 MAP2K1Q02750 393 aaPredicted RBP12.57□□□□□ -0.4
FMR1-211ENST00000478848 RASSF7Q02833 373 aa12.57□□□□□ -0.4
FMR1-211ENST00000478848 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
FMR1-211ENST00000478848 PIM2Q9P1W9 311 aa12.57□□□□□ -0.4
FMR1-211ENST00000478848 KIF13BQ9NQT8 1826 aa12.57□□□□□ -0.4
FMR1-211ENST00000478848 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
FMR1-211ENST00000478848 SBF1O95248 1867 aa12.56□□□□□ -0.4
FMR1-211ENST00000478848 TOGARAM1Q9Y4F4 1720 aa12.55□□□□□ -0.4
FMR1-211ENST00000478848 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
FMR1-211ENST00000478848 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
FMR1-211ENST00000478848 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
FMR1-211ENST00000478848 SSFA2P28290 1259 aa12.55□□□□□ -0.4
FMR1-211ENST00000478848 CABP2Q9NPB3 220 aa12.55□□□□□ -0.4
FMR1-211ENST00000478848 CABP1Q9NZU7 370 aa12.55□□□□□ -0.4
FMR1-211ENST00000478848 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
FMR1-211ENST00000478848 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
FMR1-211ENST00000478848 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
FMR1-211ENST00000478848 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
FMR1-211ENST00000478848 TMEM88BA6NKF7 163 aa12.54□□□□□ -0.4
FMR1-211ENST00000478848 CCDC87Q9NVE4 849 aa12.54□□□□□ -0.4
FMR1-211ENST00000478848 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
FMR1-211ENST00000478848 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
FMR1-211ENST00000478848 VIRMAQ69YN4 1812 aaKnown RBP12.53□□□□□ -0.4
FMR1-211ENST00000478848 TAF1LQ8IZX4 1826 aa12.53□□□□□ -0.4
FMR1-211ENST00000478848 TSKSQ9UJT2 592 aa12.53□□□□□ -0.4
FMR1-211ENST00000478848 KDM2AQ9Y2K7 1162 aa12.53□□□□□ -0.4
FMR1-211ENST00000478848 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms