RNA–Protein interactions for RNA: ENST00000478640.6

CCT3-212, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 583 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-212ENST00000478640 PANK3Q9H999 370 aa15.56■□□□□ 0.08
CCT3-212ENST00000478640 SMG6Q86US8 1419 aaKnown RBP15.56■□□□□ 0.08
CCT3-212ENST00000478640 ABCC6O95255 1503 aa15.55■□□□□ 0.08
CCT3-212ENST00000478640 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
CCT3-212ENST00000478640 LRRC4BQ9NT99 713 aa15.53■□□□□ 0.08
CCT3-212ENST00000478640 TFCP2L1Q9NZI6 479 aa15.53■□□□□ 0.08
CCT3-212ENST00000478640 PEAK1Q9H792 1746 aa15.53■□□□□ 0.08
CCT3-212ENST00000478640 RTL1A6NKG5 1358 aa15.52■□□□□ 0.08
CCT3-212ENST00000478640 INSRP06213 1382 aa15.52■□□□□ 0.08
CCT3-212ENST00000478640 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
CCT3-212ENST00000478640 FLT4P35916 1363 aa15.51■□□□□ 0.07
CCT3-212ENST00000478640 LTN1O94822 1766 aa15.51■□□□□ 0.07
CCT3-212ENST00000478640 ZNF827Q17R98 1081 aa15.5■□□□□ 0.07
CCT3-212ENST00000478640 SLC27A3Q5K4L6 730 aa15.5■□□□□ 0.07
CCT3-212ENST00000478640 POLKQ9UBT6 870 aa15.5■□□□□ 0.07
CCT3-212ENST00000478640 CCNL1Q9UK58 526 aaPredicted RBP15.5■□□□□ 0.07
CCT3-212ENST00000478640 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
CCT3-212ENST00000478640 MORC1Q86VD1 984 aa15.49■□□□□ 0.07
CCT3-212ENST00000478640 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
CCT3-212ENST00000478640 MTFR1LQ9H019 292 aa15.49■□□□□ 0.07
CCT3-212ENST00000478640 SPG7Q9UQ90 795 aa15.49■□□□□ 0.07
CCT3-212ENST00000478640 LRP5O75197 1615 aa15.49■□□□□ 0.07
CCT3-212ENST00000478640 WASHC2AQ641Q2 1341 aa15.48■□□□□ 0.07
CCT3-212ENST00000478640 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
CCT3-212ENST00000478640 EYA1Q99502 592 aa15.48■□□□□ 0.07
CCT3-212ENST00000478640 KNSTRNQ9Y448 316 aa15.48■□□□□ 0.07
CCT3-212ENST00000478640 MEGF6O75095 1541 aa15.48■□□□□ 0.07
CCT3-212ENST00000478640 PCDH11XQ9BZA7 1347 aa15.47■□□□□ 0.07
CCT3-212ENST00000478640 PCDH11YQ9BZA8 1340 aa15.47■□□□□ 0.07
CCT3-212ENST00000478640 PTGER2P43116 358 aa15.47■□□□□ 0.07
CCT3-212ENST00000478640 NUP188Q5SRE5 1749 aa15.47■□□□□ 0.07
CCT3-212ENST00000478640 CYP27B1O15528 508 aa15.46■□□□□ 0.07
CCT3-212ENST00000478640 USP54Q70EL1 1684 aa15.46■□□□□ 0.07
CCT3-212ENST00000478640 RREB1Q92766 1687 aa15.45■□□□□ 0.06
CCT3-212ENST00000478640 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
CCT3-212ENST00000478640 AKT1S1Q96B36 256 aa15.45■□□□□ 0.06
CCT3-212ENST00000478640 ARXQ96QS3 562 aa15.45■□□□□ 0.06
CCT3-212ENST00000478640 FHDC1Q9C0D6 1143 aaPredicted RBP15.45■□□□□ 0.06
CCT3-212ENST00000478640 KIF24Q5T7B8 1368 aa15.45■□□□□ 0.06
CCT3-212ENST00000478640 YY1P25490 414 aa15.43■□□□□ 0.06
CCT3-212ENST00000478640 POLD1P28340 1107 aa15.43■□□□□ 0.06
CCT3-212ENST00000478640 SYT17Q9BSW7 474 aa15.43■□□□□ 0.06
CCT3-212ENST00000478640 SBF2Q86WG5 1849 aa15.43■□□□□ 0.06
CCT3-212ENST00000478640 WNK3Q9BYP7 1800 aa15.42■□□□□ 0.06
CCT3-212ENST00000478640 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
CCT3-212ENST00000478640 PIGBQ92521 554 aa15.41■□□□□ 0.06
CCT3-212ENST00000478640 TMOD3Q9NYL9 352 aa15.41■□□□□ 0.06
CCT3-212ENST00000478640 PNPLA7Q6ZV29 1317 aa15.41■□□□□ 0.06
CCT3-212ENST00000478640 IFNL2Q8IZJ0 200 aa15.4■□□□□ 0.06
CCT3-212ENST00000478640 SMARCC1Q92922 1105 aaPredicted RBP15.4■□□□□ 0.06
CCT3-212ENST00000478640 NSD2O96028 1365 aa15.39■□□□□ 0.05
CCT3-212ENST00000478640 NHSQ6T4R5 1651 aa15.39■□□□□ 0.05
CCT3-212ENST00000478640 MSL1Q68DK7 614 aa15.39■□□□□ 0.05
CCT3-212ENST00000478640 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
CCT3-212ENST00000478640 SLC16A10Q8TF71 515 aa15.39■□□□□ 0.05
CCT3-212ENST00000478640 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
CCT3-212ENST00000478640 PHKG2P15735 406 aa15.38■□□□□ 0.05
CCT3-212ENST00000478640 PLEKHO1Q53GL0 409 aaPredicted RBP15.38■□□□□ 0.05
CCT3-212ENST00000478640 CC2D1BQ5T0F9 858 aaKnown RBP15.38■□□□□ 0.05
CCT3-212ENST00000478640 COL23A1Q86Y22 540 aaPredicted RBP15.38■□□□□ 0.05
CCT3-212ENST00000478640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.38■□□□□ 0.051e-10■■□□□ 12.7
CCT3-212ENST00000478640 KIF7Q2M1P5 1343 aa15.38■□□□□ 0.05
CCT3-212ENST00000478640 PHF14O94880 888 aa15.37■□□□□ 0.05
CCT3-212ENST00000478640 HMGB2P26583 209 aaKnown RBP15.37■□□□□ 0.05
CCT3-212ENST00000478640 NKX1-1Q15270 411 aaPredicted RBP15.37■□□□□ 0.05
CCT3-212ENST00000478640 GPR162Q16538 588 aa15.37■□□□□ 0.05
CCT3-212ENST00000478640 AK7Q96M32 723 aa15.37■□□□□ 0.05
CCT3-212ENST00000478640 SGIP1Q9BQI5 828 aa15.37■□□□□ 0.05
CCT3-212ENST00000478640 ASAP1Q9ULH1 1129 aa15.37■□□□□ 0.05
CCT3-212ENST00000478640 SULT6B1Q6IMI4 303 aa15.36■□□□□ 0.05
CCT3-212ENST00000478640 SMIM5Q71RC9 77 aa15.36■□□□□ 0.05
CCT3-212ENST00000478640 KAT6BQ8WYB5 2073 aa15.36■□□□□ 0.05
CCT3-212ENST00000478640 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
CCT3-212ENST00000478640 CABP4P57796 275 aa15.35■□□□□ 0.05
CCT3-212ENST00000478640 ZNF530Q6P9A1 599 aaPredicted RBP15.35■□□□□ 0.05
CCT3-212ENST00000478640 AEBP1Q8IUX7 1158 aa15.35■□□□□ 0.05
CCT3-212ENST00000478640 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
CCT3-212ENST00000478640 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
CCT3-212ENST00000478640 RGPD3A6NKT7 1758 aaPredicted RBP15.34■□□□□ 0.05
CCT3-212ENST00000478640 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
CCT3-212ENST00000478640 RGPD4Q7Z3J3 1758 aa15.34■□□□□ 0.05
CCT3-212ENST00000478640 BTAF1O14981 1849 aa15.34■□□□□ 0.05
CCT3-212ENST00000478640 MTHFSP49914 203 aa15.34■□□□□ 0.05
CCT3-212ENST00000478640 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
CCT3-212ENST00000478640 KIF20BQ96Q89 1820 aa15.33■□□□□ 0.05
CCT3-212ENST00000478640 MYOM1P52179 1685 aa15.33■□□□□ 0.04
CCT3-212ENST00000478640 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
CCT3-212ENST00000478640 SIK1P57059 783 aa15.33■□□□□ 0.04
CCT3-212ENST00000478640 AMOTQ4VCS5 1084 aa15.33■□□□□ 0.04
CCT3-212ENST00000478640 FLAD1Q8NFF5 587 aa15.33■□□□□ 0.04
CCT3-212ENST00000478640 HSP90AB1P08238 724 aaKnown RBP15.32■□□□□ 0.04
CCT3-212ENST00000478640 AMER1Q5JTC6 1135 aaPredicted RBP15.32■□□□□ 0.04
CCT3-212ENST00000478640 DCAF5Q96JK2 942 aa15.32■□□□□ 0.04
CCT3-212ENST00000478640 ATG3Q9NT62 314 aa15.32■□□□□ 0.04
CCT3-212ENST00000478640 IGSF1Q8N6C5 1336 aa15.32■□□□□ 0.04
CCT3-212ENST00000478640 ERVV-2B6SEH9 535 aa15.31■□□□□ 0.04
CCT3-212ENST00000478640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.3■□□□□ 0.04
CCT3-212ENST00000478640 GNPATO15228 680 aa15.3■□□□□ 0.04
CCT3-212ENST00000478640 HMOX1P09601 288 aa15.3■□□□□ 0.04
CCT3-212ENST00000478640 IL13P35225 146 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms