RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 LRP5O75197 1615 aa21.95■■□□□ 1.1
CYTH3-206ENST00000478541 PSDA5PKW4 1024 aaPredicted RBP21.94■■□□□ 1.1
CYTH3-206ENST00000478541 KCNQ2O43526 872 aa21.94■■□□□ 1.1
CYTH3-206ENST00000478541 DDX54Q8TDD1 881 aaKnown RBP21.94■■□□□ 1.1
CYTH3-206ENST00000478541 RAPGEF4Q8WZA2 1011 aa21.94■■□□□ 1.1
CYTH3-206ENST00000478541 R3HDM1Q15032 1099 aaKnown RBP21.93■■□□□ 1.1
CYTH3-206ENST00000478541 NBPF14Q5TI25 921 aa21.93■■□□□ 1.1
CYTH3-206ENST00000478541 DOT1LQ8TEK3 1739 aa21.93■■□□□ 1.1
CYTH3-206ENST00000478541 ACSBG1Q96GR2 724 aa21.93■■□□□ 1.1
CYTH3-206ENST00000478541 PKD1L3Q7Z443 1732 aa21.92■■□□□ 1.1
CYTH3-206ENST00000478541 TATP17735 454 aaPredicted RBP21.92■■□□□ 1.1
CYTH3-206ENST00000478541 TNNT2P45379 298 aaPredicted RBP21.92■■□□□ 1.1
CYTH3-206ENST00000478541 KAT6BQ8WYB5 2073 aa21.92■■□□□ 1.1
CYTH3-206ENST00000478541 AMER1Q5JTC6 1135 aaPredicted RBP21.91■■□□□ 1.1
CYTH3-206ENST00000478541 MORC1Q86VD1 984 aa21.91■■□□□ 1.1
CYTH3-206ENST00000478541 PER1O15534 1290 aaPredicted RBP21.9■■□□□ 1.1
CYTH3-206ENST00000478541 PROM2Q8N271 834 aa21.9■■□□□ 1.1
CYTH3-206ENST00000478541 EYA1Q99502 592 aa21.88■■□□□ 1.09
CYTH3-206ENST00000478541 PCDH11XQ9BZA7 1347 aa21.87■■□□□ 1.09
CYTH3-206ENST00000478541 PCDH11YQ9BZA8 1340 aa21.87■■□□□ 1.09
CYTH3-206ENST00000478541 EIF4A2Q14240 407 aaKnown RBP21.87■■□□□ 1.09
CYTH3-206ENST00000478541 TXNRD1Q16881 649 aa21.87■■□□□ 1.09
CYTH3-206ENST00000478541 PLEKHG2Q9H7P9 1386 aa21.87■■□□□ 1.09
CYTH3-206ENST00000478541 NPC1L1Q9UHC9 1359 aa21.84■■□□□ 1.09
CYTH3-206ENST00000478541 LY75O60449 1722 aa21.83■■□□□ 1.09
CYTH3-206ENST00000478541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.83■■□□□ 1.09
CYTH3-206ENST00000478541 PAPPAQ13219 1627 aa21.83■■□□□ 1.08
CYTH3-206ENST00000478541 IGSF1Q8N6C5 1336 aa21.82■■□□□ 1.08
CYTH3-206ENST00000478541 PRIM1P49642 420 aaKnown RBP21.82■■□□□ 1.08
CYTH3-206ENST00000478541 ANO8Q9HCE9 1232 aaPredicted RBP21.82■■□□□ 1.08
CYTH3-206ENST00000478541 CYP27B1O15528 508 aa21.81■■□□□ 1.08
CYTH3-206ENST00000478541 CASZ1Q86V15 1759 aa21.81■■□□□ 1.08
CYTH3-206ENST00000478541 TOGARAM1Q9Y4F4 1720 aa21.8■■□□□ 1.08
CYTH3-206ENST00000478541 SYTL4Q96C24 671 aaPredicted RBP21.8■■□□□ 1.08
CYTH3-206ENST00000478541 SPG7Q9UQ90 795 aa21.8■■□□□ 1.08
CYTH3-206ENST00000478541 ITGB4P16144 1822 aa21.8■■□□□ 1.08
CYTH3-206ENST00000478541 NKX1-1Q15270 411 aaPredicted RBP21.78■■□□□ 1.08
CYTH3-206ENST00000478541 SLC15A2Q16348 729 aa21.77■■□□□ 1.08
CYTH3-206ENST00000478541 SLC27A3Q5K4L6 730 aa21.77■■□□□ 1.08
CYTH3-206ENST00000478541 STK32BQ9NY57 414 aa21.77■■□□□ 1.08
CYTH3-206ENST00000478541 CC2D1BQ5T0F9 858 aaKnown RBP21.76■■□□□ 1.07
CYTH3-206ENST00000478541 LRRC4BQ9NT99 713 aa21.75■■□□□ 1.07
CYTH3-206ENST00000478541 QSER1Q2KHR3 1735 aa21.75■■□□□ 1.07
CYTH3-206ENST00000478541 IL13P35225 146 aa21.74■■□□□ 1.07
CYTH3-206ENST00000478541 MTHFSP49914 203 aa21.74■■□□□ 1.07
CYTH3-206ENST00000478541 KDRP35968 1356 aa21.74■■□□□ 1.07
CYTH3-206ENST00000478541 IFNL2Q8IZJ0 200 aa21.73■■□□□ 1.07
CYTH3-206ENST00000478541 PHKG2P15735 406 aa21.72■■□□□ 1.07
CYTH3-206ENST00000478541 SPON1Q9HCB6 807 aa21.7■■□□□ 1.06
CYTH3-206ENST00000478541 AMOTQ4VCS5 1084 aa21.69■■□□□ 1.06
CYTH3-206ENST00000478541 PLEKHO1Q53GL0 409 aaPredicted RBP21.69■■□□□ 1.06
CYTH3-206ENST00000478541 MPRIPQ6WCQ1 1025 aa21.69■■□□□ 1.06
CYTH3-206ENST00000478541 AEBP1Q8IUX7 1158 aa21.69■■□□□ 1.06
CYTH3-206ENST00000478541 ZNF827Q17R98 1081 aa21.68■■□□□ 1.06
CYTH3-206ENST00000478541 SULT6B1Q6IMI4 303 aa21.68■■□□□ 1.06
CYTH3-206ENST00000478541 AKT1S1Q96B36 256 aa21.68■■□□□ 1.06
CYTH3-206ENST00000478541 PDGFDQ9GZP0 370 aaPredicted RBP21.68■■□□□ 1.06
CYTH3-206ENST00000478541 C5P01031 1676 aa21.68■■□□□ 1.06
CYTH3-206ENST00000478541 TAF1LQ8IZX4 1826 aa21.68■■□□□ 1.06
CYTH3-206ENST00000478541 TUBGCP6Q96RT7 1819 aa21.68■■□□□ 1.06
CYTH3-206ENST00000478541 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
CYTH3-206ENST00000478541 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
CYTH3-206ENST00000478541 PALLDQ8WX93 1383 aa21.66■■□□□ 1.06
CYTH3-206ENST00000478541 HSP90AB1P08238 724 aaKnown RBP21.66■■□□□ 1.06
CYTH3-206ENST00000478541 PIGBQ92521 554 aa21.66■■□□□ 1.06
CYTH3-206ENST00000478541 SMARCC1Q92922 1105 aaPredicted RBP21.66■■□□□ 1.06
CYTH3-206ENST00000478541 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
CYTH3-206ENST00000478541 HMGB2P26583 209 aaKnown RBP21.65■■□□□ 1.06
CYTH3-206ENST00000478541 KCNQ4P56696 695 aa21.64■■□□□ 1.05
CYTH3-206ENST00000478541 TMOD3Q9NYL9 352 aa21.64■■□□□ 1.05
CYTH3-206ENST00000478541 ZNF530Q6P9A1 599 aaPredicted RBP21.63■■□□□ 1.05
CYTH3-206ENST00000478541 DCAF5Q96JK2 942 aa21.63■■□□□ 1.05
CYTH3-206ENST00000478541 ERVV-2B6SEH9 535 aa21.62■■□□□ 1.05
CYTH3-206ENST00000478541 ZBTB7AO95365 584 aa21.62■■□□□ 1.05
CYTH3-206ENST00000478541 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
CYTH3-206ENST00000478541 MTFR1LQ9H019 292 aa21.62■■□□□ 1.05
CYTH3-206ENST00000478541 KDM6AO15550 1401 aaPredicted RBP21.61■■□□□ 1.05
CYTH3-206ENST00000478541 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
CYTH3-206ENST00000478541 COL24A1Q17RW2 1714 aa21.6■■□□□ 1.05
CYTH3-206ENST00000478541 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
CYTH3-206ENST00000478541 PNPLA7Q6ZV29 1317 aa21.59■■□□□ 1.05
CYTH3-206ENST00000478541 PTGER2P43116 358 aa21.59■■□□□ 1.05
CYTH3-206ENST00000478541 C1orf141Q5JVX7 400 aa21.59■■□□□ 1.05
CYTH3-206ENST00000478541 SLC16A10Q8TF71 515 aa21.59■■□□□ 1.05
CYTH3-206ENST00000478541 TFCP2L1Q9NZI6 479 aa21.59■■□□□ 1.05
CYTH3-206ENST00000478541 C4BP0C0L5 1744 aa21.58■■□□□ 1.05
CYTH3-206ENST00000478541 VIRMAQ69YN4 1812 aaKnown RBP21.58■■□□□ 1.05
CYTH3-206ENST00000478541 HMOX1P09601 288 aa21.58■■□□□ 1.05
CYTH3-206ENST00000478541 PPP1R1BQ9UD71 204 aaPredicted RBP21.58■■□□□ 1.05
CYTH3-206ENST00000478541 SGIP1Q9BQI5 828 aa21.57■■□□□ 1.04
CYTH3-206ENST00000478541 ATF5Q9Y2D1 282 aaPredicted RBP21.57■■□□□ 1.04
CYTH3-206ENST00000478541 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
CYTH3-206ENST00000478541 AKAP4Q5JQC9 854 aa21.56■■□□□ 1.04
CYTH3-206ENST00000478541 ATG3Q9NT62 314 aa21.56■■□□□ 1.04
CYTH3-206ENST00000478541 ASAP1Q9ULH1 1129 aa21.56■■□□□ 1.04
CYTH3-206ENST00000478541 ADAMTS7Q9UKP4 1686 aa21.56■■□□□ 1.04
CYTH3-206ENST00000478541 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
CYTH3-206ENST00000478541 SIK1P57059 783 aa21.55■■□□□ 1.04
CYTH3-206ENST00000478541 CFAP53Q96M91 514 aa21.55■■□□□ 1.04
CYTH3-206ENST00000478541 UBR3Q6ZT12 1888 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms