RNA–Protein interactions for RNA: ENST00000478509.1

FAM50A-204, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 3

Gene FAM50A, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-204ENST00000478509 LRP5O75197 1615 aa20.82■□□□□ 0.92
FAM50A-204ENST00000478509 KIF24Q5T7B8 1368 aa20.81■□□□□ 0.92
FAM50A-204ENST00000478509 PLSCR1O15162 318 aa20.78■□□□□ 0.92
FAM50A-204ENST00000478509 NBPF14Q5TI25 921 aa20.78■□□□□ 0.92
FAM50A-204ENST00000478509 RAPGEF4Q8WZA2 1011 aa20.78■□□□□ 0.92
FAM50A-204ENST00000478509 POLKQ9UBT6 870 aa20.78■□□□□ 0.92
FAM50A-204ENST00000478509 ZCRB1Q8TBF4 217 aaKnown RBP20.77■□□□□ 0.92
FAM50A-204ENST00000478509 ANO8Q9HCE9 1232 aaPredicted RBP20.77■□□□□ 0.92
FAM50A-204ENST00000478509 TATP17735 454 aaPredicted RBP20.76■□□□□ 0.91
FAM50A-204ENST00000478509 SYTL4Q96C24 671 aaPredicted RBP20.76■□□□□ 0.91
FAM50A-204ENST00000478509 NSD2O96028 1365 aa20.75■□□□□ 0.91
FAM50A-204ENST00000478509 PROM2Q8N271 834 aa20.75■□□□□ 0.91
FAM50A-204ENST00000478509 KNSTRNQ9Y448 316 aa20.75■□□□□ 0.91
FAM50A-204ENST00000478509 WASHC2AQ641Q2 1341 aa20.75■□□□□ 0.91
FAM50A-204ENST00000478509 TXNRD1Q16881 649 aa20.74■□□□□ 0.91
FAM50A-204ENST00000478509 PKD1L3Q7Z443 1732 aa20.74■□□□□ 0.91
FAM50A-204ENST00000478509 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
FAM50A-204ENST00000478509 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
FAM50A-204ENST00000478509 EIF4A2Q14240 407 aaKnown RBP20.71■□□□□ 0.91
FAM50A-204ENST00000478509 EYA1Q99502 592 aa20.71■□□□□ 0.91
FAM50A-204ENST00000478509 NCAPD2Q15021 1401 aa20.7■□□□□ 0.9
FAM50A-204ENST00000478509 PRIM1P49642 420 aaKnown RBP20.7■□□□□ 0.9
FAM50A-204ENST00000478509 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
FAM50A-204ENST00000478509 PCDH11XQ9BZA7 1347 aa20.7■□□□□ 0.9
FAM50A-204ENST00000478509 PCDH11YQ9BZA8 1340 aa20.7■□□□□ 0.9
FAM50A-204ENST00000478509 CASZ1Q86V15 1759 aa20.69■□□□□ 0.9
FAM50A-204ENST00000478509 PAPPAQ13219 1627 aa20.69■□□□□ 0.9
FAM50A-204ENST00000478509 AMER1Q5JTC6 1135 aaPredicted RBP20.68■□□□□ 0.9
FAM50A-204ENST00000478509 ITGB4P16144 1822 aa20.67■□□□□ 0.9
FAM50A-204ENST00000478509 STK32BQ9NY57 414 aa20.67■□□□□ 0.9
FAM50A-204ENST00000478509 CC2D1BQ5T0F9 858 aaKnown RBP20.66■□□□□ 0.9
FAM50A-204ENST00000478509 PDGFDQ9GZP0 370 aaPredicted RBP20.66■□□□□ 0.9
FAM50A-204ENST00000478509 LY75O60449 1722 aa20.66■□□□□ 0.9
FAM50A-204ENST00000478509 CYP27B1O15528 508 aa20.65■□□□□ 0.9
FAM50A-204ENST00000478509 KCNQ4P56696 695 aa20.65■□□□□ 0.9
FAM50A-204ENST00000478509 TUBGCP6Q96RT7 1819 aa20.63■□□□□ 0.89
FAM50A-204ENST00000478509 LRRC4BQ9NT99 713 aa20.63■□□□□ 0.89
FAM50A-204ENST00000478509 IGSF1Q8N6C5 1336 aa20.62■□□□□ 0.89
FAM50A-204ENST00000478509 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
FAM50A-204ENST00000478509 ZNF827Q17R98 1081 aa20.61■□□□□ 0.89
FAM50A-204ENST00000478509 SPG7Q9UQ90 795 aa20.61■□□□□ 0.89
FAM50A-204ENST00000478509 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
FAM50A-204ENST00000478509 ZBTB7AO95365 584 aa20.6■□□□□ 0.89
FAM50A-204ENST00000478509 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
FAM50A-204ENST00000478509 AEBP1Q8IUX7 1158 aa20.59■□□□□ 0.89
FAM50A-204ENST00000478509 SPON1Q9HCB6 807 aa20.58■□□□□ 0.89
FAM50A-204ENST00000478509 C5P01031 1676 aa20.58■□□□□ 0.88
FAM50A-204ENST00000478509 PPP1R1BQ9UD71 204 aaPredicted RBP20.57■□□□□ 0.88
FAM50A-204ENST00000478509 CCNL1Q9UK58 526 aaPredicted RBP20.57■□□□□ 0.88
FAM50A-204ENST00000478509 MTHFSP49914 203 aa20.56■□□□□ 0.88
FAM50A-204ENST00000478509 SLC27A3Q5K4L6 730 aa20.56■□□□□ 0.88
FAM50A-204ENST00000478509 QSER1Q2KHR3 1735 aa20.56■□□□□ 0.88
FAM50A-204ENST00000478509 TAF1LQ8IZX4 1826 aa20.55■□□□□ 0.88
FAM50A-204ENST00000478509 PHKG2P15735 406 aa20.55■□□□□ 0.88
FAM50A-204ENST00000478509 SULT6B1Q6IMI4 303 aa20.55■□□□□ 0.88
FAM50A-204ENST00000478509 ATF5Q9Y2D1 282 aaPredicted RBP20.55■□□□□ 0.88
FAM50A-204ENST00000478509 PALLDQ8WX93 1383 aa20.55■□□□□ 0.88
FAM50A-204ENST00000478509 IL13P35225 146 aa20.54■□□□□ 0.88
FAM50A-204ENST00000478509 IFNL2Q8IZJ0 200 aa20.54■□□□□ 0.88
FAM50A-204ENST00000478509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.54■□□□□ 0.88
FAM50A-204ENST00000478509 AKT1S1Q96B36 256 aa20.53■□□□□ 0.88
FAM50A-204ENST00000478509 NKX1-1Q15270 411 aaPredicted RBP20.52■□□□□ 0.88
FAM50A-204ENST00000478509 PIGBQ92521 554 aa20.52■□□□□ 0.88
FAM50A-204ENST00000478509 ZNF530Q6P9A1 599 aaPredicted RBP20.51■□□□□ 0.87
FAM50A-204ENST00000478509 TMOD3Q9NYL9 352 aa20.51■□□□□ 0.87
FAM50A-204ENST00000478509 TFCP2L1Q9NZI6 479 aa20.51■□□□□ 0.87
FAM50A-204ENST00000478509 NPC1L1Q9UHC9 1359 aa20.5■□□□□ 0.87
FAM50A-204ENST00000478509 HMOX1P09601 288 aa20.5■□□□□ 0.87
FAM50A-204ENST00000478509 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
FAM50A-204ENST00000478509 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
FAM50A-204ENST00000478509 PNPLA7Q6ZV29 1317 aa20.49■□□□□ 0.87
FAM50A-204ENST00000478509 KDRP35968 1356 aa20.48■□□□□ 0.87
FAM50A-204ENST00000478509 C4BP0C0L5 1744 aa20.48■□□□□ 0.87
FAM50A-204ENST00000478509 KDM6AO15550 1401 aaPredicted RBP20.48■□□□□ 0.87
FAM50A-204ENST00000478509 MTFR1LQ9H019 292 aa20.48■□□□□ 0.87
FAM50A-204ENST00000478509 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
FAM50A-204ENST00000478509 PLEKHG2Q9H7P9 1386 aa20.47■□□□□ 0.87
FAM50A-204ENST00000478509 PTGER2P43116 358 aa20.47■□□□□ 0.87
FAM50A-204ENST00000478509 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
FAM50A-204ENST00000478509 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
FAM50A-204ENST00000478509 C1orf141Q5JVX7 400 aa20.46■□□□□ 0.87
FAM50A-204ENST00000478509 SMARCC1Q92922 1105 aaPredicted RBP20.46■□□□□ 0.87
FAM50A-204ENST00000478509 ASAP1Q9ULH1 1129 aa20.46■□□□□ 0.87
FAM50A-204ENST00000478509 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
FAM50A-204ENST00000478509 MSH5O43196 834 aa20.45■□□□□ 0.86
FAM50A-204ENST00000478509 U2SURPO15042 1029 aaKnown RBP20.43■□□□□ 0.86
FAM50A-204ENST00000478509 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
FAM50A-204ENST00000478509 DCAF5Q96JK2 942 aa20.43■□□□□ 0.86
FAM50A-204ENST00000478509 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
FAM50A-204ENST00000478509 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
FAM50A-204ENST00000478509 SIK1P57059 783 aa20.42■□□□□ 0.86
FAM50A-204ENST00000478509 ATG3Q9NT62 314 aa20.42■□□□□ 0.86
FAM50A-204ENST00000478509 CABP4P57796 275 aa20.41■□□□□ 0.86
FAM50A-204ENST00000478509 ERVV-2B6SEH9 535 aa20.4■□□□□ 0.86
FAM50A-204ENST00000478509 PHF14O94880 888 aa20.4■□□□□ 0.86
FAM50A-204ENST00000478509 COL24A1Q17RW2 1714 aa20.4■□□□□ 0.86
FAM50A-204ENST00000478509 SMIM5Q71RC9 77 aa20.4■□□□□ 0.86
FAM50A-204ENST00000478509 COL23A1Q86Y22 540 aaPredicted RBP20.4■□□□□ 0.86
FAM50A-204ENST00000478509 LINC00116Q8NCU8 138 aa20.4■□□□□ 0.86
FAM50A-204ENST00000478509 AK7Q96M32 723 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms