RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 BCL9O00512 1426 aa17.75■□□□□ 0.43
COL1A2-207ENST00000478215 CNGB1Q14028 1251 aaPredicted RBP17.75■□□□□ 0.43
COL1A2-207ENST00000478215 EIF4A2Q14240 407 aaKnown RBP17.75■□□□□ 0.43
COL1A2-207ENST00000478215 PTF1AQ7RTS3 328 aa17.74■□□□□ 0.43
COL1A2-207ENST00000478215 BAG6P46379 1132 aa17.73■□□□□ 0.43
COL1A2-207ENST00000478215 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
COL1A2-207ENST00000478215 EYA1Q99502 592 aa17.73■□□□□ 0.43
COL1A2-207ENST00000478215 LY75O60449 1722 aa17.7■□□□□ 0.42
COL1A2-207ENST00000478215 APBA3O96018 575 aa17.7■□□□□ 0.42
COL1A2-207ENST00000478215 ZCRB1Q8TBF4 217 aaKnown RBP17.7■□□□□ 0.42
COL1A2-207ENST00000478215 DDX54Q8TDD1 881 aaKnown RBP17.7■□□□□ 0.42
COL1A2-207ENST00000478215 RAPGEF4Q8WZA2 1011 aa17.7■□□□□ 0.42
COL1A2-207ENST00000478215 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
COL1A2-207ENST00000478215 TATP17735 454 aaPredicted RBP17.69■□□□□ 0.42
COL1A2-207ENST00000478215 ZEB1P37275 1124 aaPredicted RBP17.69■□□□□ 0.42
COL1A2-207ENST00000478215 MTHFSP49914 203 aa17.69■□□□□ 0.42
COL1A2-207ENST00000478215 EZH2Q15910 746 aaKnown RBP17.69■□□□□ 0.42
COL1A2-207ENST00000478215 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
COL1A2-207ENST00000478215 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
COL1A2-207ENST00000478215 KCNQ2O43526 872 aa17.68■□□□□ 0.42
COL1A2-207ENST00000478215 CAMKK2Q96RR4 588 aa17.68■□□□□ 0.42
COL1A2-207ENST00000478215 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
COL1A2-207ENST00000478215 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
COL1A2-207ENST00000478215 TAF1LQ8IZX4 1826 aa17.67■□□□□ 0.42
COL1A2-207ENST00000478215 TUBGCP6Q96RT7 1819 aa17.65■□□□□ 0.42
COL1A2-207ENST00000478215 PARD3Q8TEW0 1356 aa17.65■□□□□ 0.42
COL1A2-207ENST00000478215 IL13P35225 146 aa17.64■□□□□ 0.41
COL1A2-207ENST00000478215 AEBP1Q8IUX7 1158 aa17.64■□□□□ 0.41
COL1A2-207ENST00000478215 SRCAPQ6ZRS2 3230 aa17.63■□□□□ 0.41
COL1A2-207ENST00000478215 CYP27B1O15528 508 aa17.63■□□□□ 0.41
COL1A2-207ENST00000478215 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
COL1A2-207ENST00000478215 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
COL1A2-207ENST00000478215 KDRP35968 1356 aa17.62■□□□□ 0.41
COL1A2-207ENST00000478215 DLG5Q8TDM6 1919 aa17.61■□□□□ 0.41
COL1A2-207ENST00000478215 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
COL1A2-207ENST00000478215 PAPPAQ13219 1627 aa17.61■□□□□ 0.41
COL1A2-207ENST00000478215 PLSCR1O15162 318 aa17.6■□□□□ 0.41
COL1A2-207ENST00000478215 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
COL1A2-207ENST00000478215 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
COL1A2-207ENST00000478215 PRIM1P49642 420 aaKnown RBP17.59■□□□□ 0.41
COL1A2-207ENST00000478215 SULT6B1Q6IMI4 303 aa17.59■□□□□ 0.41
COL1A2-207ENST00000478215 PROM2Q8N271 834 aa17.59■□□□□ 0.41
COL1A2-207ENST00000478215 SPG7Q9UQ90 795 aa17.59■□□□□ 0.41
COL1A2-207ENST00000478215 QSER1Q2KHR3 1735 aa17.58■□□□□ 0.41
COL1A2-207ENST00000478215 C5P01031 1676 aa17.58■□□□□ 0.41
COL1A2-207ENST00000478215 DIAPH1O60610 1272 aaKnown RBP17.58■□□□□ 0.4
COL1A2-207ENST00000478215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.58■□□□□ 0.4
COL1A2-207ENST00000478215 CASZ1Q86V15 1759 aa17.58■□□□□ 0.4
COL1A2-207ENST00000478215 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
COL1A2-207ENST00000478215 PSDA5PKW4 1024 aaPredicted RBP17.56■□□□□ 0.4
COL1A2-207ENST00000478215 HMOX1P09601 288 aa17.56■□□□□ 0.4
COL1A2-207ENST00000478215 ADAMTS7Q9UKP4 1686 aa17.55■□□□□ 0.4
COL1A2-207ENST00000478215 PHKG2P15735 406 aa17.55■□□□□ 0.4
COL1A2-207ENST00000478215 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
COL1A2-207ENST00000478215 TXNRD1Q16881 649 aa17.55■□□□□ 0.4
COL1A2-207ENST00000478215 SIPA1L3O60292 1781 aaPredicted RBP17.55■□□□□ 0.4
COL1A2-207ENST00000478215 LRP5O75197 1615 aa17.54■□□□□ 0.4
COL1A2-207ENST00000478215 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
COL1A2-207ENST00000478215 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
COL1A2-207ENST00000478215 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
COL1A2-207ENST00000478215 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
COL1A2-207ENST00000478215 KDM6AO15550 1401 aaPredicted RBP17.53■□□□□ 0.4
COL1A2-207ENST00000478215 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
COL1A2-207ENST00000478215 UBR3Q6ZT12 1888 aa17.52■□□□□ 0.39
COL1A2-207ENST00000478215 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
COL1A2-207ENST00000478215 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
COL1A2-207ENST00000478215 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
COL1A2-207ENST00000478215 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
COL1A2-207ENST00000478215 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
COL1A2-207ENST00000478215 LRRC4BQ9NT99 713 aa17.5■□□□□ 0.39
COL1A2-207ENST00000478215 MYH14Q7Z406 1995 aaKnown RBP17.49■□□□□ 0.39
COL1A2-207ENST00000478215 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
COL1A2-207ENST00000478215 KCNQ4P56696 695 aa17.48■□□□□ 0.39
COL1A2-207ENST00000478215 NBPF14Q5TI25 921 aa17.48■□□□□ 0.39
COL1A2-207ENST00000478215 PIGBQ92521 554 aa17.48■□□□□ 0.39
COL1A2-207ENST00000478215 C4BP0C0L5 1744 aa17.47■□□□□ 0.39
COL1A2-207ENST00000478215 UBR2Q8IWV8 1755 aa17.46■□□□□ 0.39
COL1A2-207ENST00000478215 RALBP1Q15311 655 aa17.46■□□□□ 0.39
COL1A2-207ENST00000478215 C1orf141Q5JVX7 400 aa17.46■□□□□ 0.39
COL1A2-207ENST00000478215 PALLDQ8WX93 1383 aa17.45■□□□□ 0.38
COL1A2-207ENST00000478215 TJP1Q07157 1748 aa17.45■□□□□ 0.38
COL1A2-207ENST00000478215 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
COL1A2-207ENST00000478215 MTHFSDQ2M296 383 aaKnown RBP17.45■□□□□ 0.38
COL1A2-207ENST00000478215 DCAF5Q96JK2 942 aa17.45■□□□□ 0.38
COL1A2-207ENST00000478215 RSPH6AQ9H0K4 717 aa17.45■□□□□ 0.38
COL1A2-207ENST00000478215 TMOD3Q9NYL9 352 aa17.45■□□□□ 0.38
COL1A2-207ENST00000478215 MRC1P22897 1456 aa17.44■□□□□ 0.38
COL1A2-207ENST00000478215 COL24A1Q17RW2 1714 aa17.44■□□□□ 0.38
COL1A2-207ENST00000478215 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
COL1A2-207ENST00000478215 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
COL1A2-207ENST00000478215 SLC27A3Q5K4L6 730 aa17.44■□□□□ 0.38
COL1A2-207ENST00000478215 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
COL1A2-207ENST00000478215 ERVV-2B6SEH9 535 aa17.43■□□□□ 0.38
COL1A2-207ENST00000478215 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
COL1A2-207ENST00000478215 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL1A2-207ENST00000478215 AKAP4Q5JQC9 854 aa17.43■□□□□ 0.38
COL1A2-207ENST00000478215 PDGFDQ9GZP0 370 aaPredicted RBP17.43■□□□□ 0.38
COL1A2-207ENST00000478215 CCNL1Q9UK58 526 aaPredicted RBP17.43■□□□□ 0.38
COL1A2-207ENST00000478215 ASAP1Q9ULH1 1129 aa17.43■□□□□ 0.38
COL1A2-207ENST00000478215 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms