RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 ZNF526Q8TF50 670 aaPredicted RBP17.51■□□□□ 0.39
SBF1-208ENST00000477234 LTN1O94822 1766 aa17.51■□□□□ 0.39
SBF1-208ENST00000477234 COL23A1Q86Y22 540 aaPredicted RBP17.5■□□□□ 0.39
SBF1-208ENST00000477234 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
SBF1-208ENST00000477234 NSD3Q9BZ95 1437 aa17.48■□□□□ 0.39
SBF1-208ENST00000477234 TOMM70O94826 608 aa17.48■□□□□ 0.39
SBF1-208ENST00000477234 CGNL1Q0VF96 1302 aa17.47■□□□□ 0.39
SBF1-208ENST00000477234 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
SBF1-208ENST00000477234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
SBF1-208ENST00000477234 ZCRB1Q8TBF4 217 aaKnown RBP17.46■□□□□ 0.39
SBF1-208ENST00000477234 IP6K1Q92551 441 aa17.46■□□□□ 0.39
SBF1-208ENST00000477234 MON2Q7Z3U7 1717 aa17.46■□□□□ 0.39
SBF1-208ENST00000477234 KIF3CO14782 793 aa17.45■□□□□ 0.38
SBF1-208ENST00000477234 KCNQ4P56696 695 aa17.44■□□□□ 0.38
SBF1-208ENST00000477234 MSL1Q68DK7 614 aa17.44■□□□□ 0.38
SBF1-208ENST00000477234 DOT1LQ8TEK3 1739 aa17.43■□□□□ 0.38
SBF1-208ENST00000477234 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
SBF1-208ENST00000477234 DNAJC5GQ8N7S2 189 aa17.42■□□□□ 0.38
SBF1-208ENST00000477234 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
SBF1-208ENST00000477234 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
SBF1-208ENST00000477234 NSD2O96028 1365 aa17.4■□□□□ 0.38
SBF1-208ENST00000477234 EDC4Q6P2E9 1401 aaKnown RBP17.4■□□□□ 0.38
SBF1-208ENST00000477234 C5P01031 1676 aa17.4■□□□□ 0.38
SBF1-208ENST00000477234 NME9Q86XW9 330 aa17.4■□□□□ 0.38
SBF1-208ENST00000477234 C16orf71Q8IYS4 520 aaPredicted RBP17.4■□□□□ 0.38
SBF1-208ENST00000477234 AK7Q96M32 723 aa17.4■□□□□ 0.38
SBF1-208ENST00000477234 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
SBF1-208ENST00000477234 SBNO2Q9Y2G9 1366 aa17.39■□□□□ 0.37
SBF1-208ENST00000477234 RBM46Q8TBY0 533 aaKnown RBP17.38■□□□□ 0.37
SBF1-208ENST00000477234 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
SBF1-208ENST00000477234 FSTL1Q12841 308 aa17.37■□□□□ 0.37
SBF1-208ENST00000477234 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
SBF1-208ENST00000477234 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
SBF1-208ENST00000477234 SSFA2P28290 1259 aa17.36■□□□□ 0.37
SBF1-208ENST00000477234 AMPHP49418 695 aa17.36■□□□□ 0.37
SBF1-208ENST00000477234 PRELPP51888 382 aa17.36■□□□□ 0.37
SBF1-208ENST00000477234 JMYQ8N9B5 988 aa17.36■□□□□ 0.37
SBF1-208ENST00000477234 KLRG1Q96E93 195 aa17.36■□□□□ 0.37
SBF1-208ENST00000477234 CICQ96RK0 1608 aaPredicted RBP17.36■□□□□ 0.37
SBF1-208ENST00000477234 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
SBF1-208ENST00000477234 TGFB2P61812 414 aa17.35■□□□□ 0.37
SBF1-208ENST00000477234 TNS4Q8IZW8 715 aa17.35■□□□□ 0.37
SBF1-208ENST00000477234 COG3Q96JB2 828 aa17.35■□□□□ 0.37
SBF1-208ENST00000477234 PUS7Q96PZ0 661 aaKnown RBP17.35■□□□□ 0.37
SBF1-208ENST00000477234 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
SBF1-208ENST00000477234 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
SBF1-208ENST00000477234 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
SBF1-208ENST00000477234 SMG6Q86US8 1419 aaKnown RBP17.34■□□□□ 0.37
SBF1-208ENST00000477234 WDR90Q96KV7 1748 aa17.33■□□□□ 0.37
SBF1-208ENST00000477234 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.36
SBF1-208ENST00000477234 HOXC9P31274 260 aa17.33■□□□□ 0.36
SBF1-208ENST00000477234 RTL1A6NKG5 1358 aa17.32■□□□□ 0.36
SBF1-208ENST00000477234 SLC24A1O60721 1099 aa17.32■□□□□ 0.36
SBF1-208ENST00000477234 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
SBF1-208ENST00000477234 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
SBF1-208ENST00000477234 KDM2BQ8NHM5 1336 aa17.31■□□□□ 0.36
SBF1-208ENST00000477234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.31■□□□□ 0.36
SBF1-208ENST00000477234 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
SBF1-208ENST00000477234 MPRIPQ6WCQ1 1025 aa17.3■□□□□ 0.36
SBF1-208ENST00000477234 L3MBTL2Q969R5 705 aa17.3■□□□□ 0.36
SBF1-208ENST00000477234 PHF14O94880 888 aa17.29■□□□□ 0.36
SBF1-208ENST00000477234 MEGF6O75095 1541 aa17.29■□□□□ 0.36
SBF1-208ENST00000477234 CD163L1Q9NR16 1453 aa17.29■□□□□ 0.36
SBF1-208ENST00000477234 UBR3Q6ZT12 1888 aa17.29■□□□□ 0.36
SBF1-208ENST00000477234 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
SBF1-208ENST00000477234 CAPN15O75808 1086 aa17.28■□□□□ 0.36
SBF1-208ENST00000477234 ARHGAP27Q6ZUM4 889 aa17.28■□□□□ 0.36
SBF1-208ENST00000477234 BCS1LQ9Y276 419 aa17.28■□□□□ 0.36
SBF1-208ENST00000477234 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
SBF1-208ENST00000477234 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
SBF1-208ENST00000477234 WWC3Q9ULE0 1092 aa17.26■□□□□ 0.35
SBF1-208ENST00000477234 A0A1W2PP64 1363 aa17.26■□□□□ 0.35
SBF1-208ENST00000477234 NMRK2Q9NPI5 230 aa17.25■□□□□ 0.35
SBF1-208ENST00000477234 CCDC87Q9NVE4 849 aa17.25■□□□□ 0.35
SBF1-208ENST00000477234 KIF13BQ9NQT8 1826 aa17.25■□□□□ 0.35
SBF1-208ENST00000477234 C10orf71Q711Q0 1435 aa17.24■□□□□ 0.35
SBF1-208ENST00000477234 MMP10P09238 476 aa17.24■□□□□ 0.35
SBF1-208ENST00000477234 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
SBF1-208ENST00000477234 SMC1BQ8NDV3 1235 aa17.24■□□□□ 0.35
SBF1-208ENST00000477234 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
SBF1-208ENST00000477234 RGPD2P0DJD1 1756 aa17.23■□□□□ 0.35
SBF1-208ENST00000477234 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
SBF1-208ENST00000477234 FCHSD2O94868 740 aa17.23■□□□□ 0.35
SBF1-208ENST00000477234 SIK1P57059 783 aa17.23■□□□□ 0.35
SBF1-208ENST00000477234 KIF24Q5T7B8 1368 aa17.23■□□□□ 0.35
SBF1-208ENST00000477234 GNPATO15228 680 aa17.22■□□□□ 0.35
SBF1-208ENST00000477234 ADRA2BP18089 450 aa17.22■□□□□ 0.35
SBF1-208ENST00000477234 TMF1P82094 1093 aa17.22■□□□□ 0.35
SBF1-208ENST00000477234 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
SBF1-208ENST00000477234 ITGB4P16144 1822 aa17.21■□□□□ 0.35
SBF1-208ENST00000477234 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.35
SBF1-208ENST00000477234 CARD11Q9BXL7 1154 aa17.21■□□□□ 0.35
SBF1-208ENST00000477234 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.34
SBF1-208ENST00000477234 C9orf131Q5VYM1 1079 aa17.2■□□□□ 0.34
SBF1-208ENST00000477234 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
SBF1-208ENST00000477234 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
SBF1-208ENST00000477234 PARP3Q9Y6F1 533 aa17.2■□□□□ 0.34
SBF1-208ENST00000477234 TOGARAM1Q9Y4F4 1720 aa17.19■□□□□ 0.34
SBF1-208ENST00000477234 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
SBF1-208ENST00000477234 PIGBQ92521 554 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms