RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 UPF1Q92900 1129 aaKnown RBP eCLIP10.32□□□□□ -0.76
RBM39-230ENST00000476806 COG3Q96JB2 828 aa10.32□□□□□ -0.76
RBM39-230ENST00000476806 CARD14Q9BXL6 1004 aa10.32□□□□□ -0.76
RBM39-230ENST00000476806 CABP1Q9NZU7 370 aa10.32□□□□□ -0.76
RBM39-230ENST00000476806 CD163L1Q9NR16 1453 aa10.31□□□□□ -0.76
RBM39-230ENST00000476806 KIF24Q5T7B8 1368 aa10.31□□□□□ -0.76
RBM39-230ENST00000476806 FMN2Q9NZ56 1722 aa10.31□□□□□ -0.76
RBM39-230ENST00000476806 HRO43593 1189 aa10.31□□□□□ -0.76
RBM39-230ENST00000476806 ECM2O94769 699 aaPredicted RBP10.31□□□□□ -0.76
RBM39-230ENST00000476806 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.3□□□□□ -0.76
RBM39-230ENST00000476806 KIF1AQ12756 1690 aa10.3□□□□□ -0.76
RBM39-230ENST00000476806 USP6P35125 1406 aa10.3□□□□□ -0.76
RBM39-230ENST00000476806 TK2O00142 265 aa10.29□□□□□ -0.76
RBM39-230ENST00000476806 SMG6Q86US8 1419 aaKnown RBP10.29□□□□□ -0.76
RBM39-230ENST00000476806 NRKQ7Z2Y5 1582 aa10.29□□□□□ -0.76
RBM39-230ENST00000476806 CDK12Q9NYV4 1490 aaPredicted RBP10.29□□□□□ -0.76
RBM39-230ENST00000476806 NGDNQ8NEJ9 315 aaKnown RBP10.28□□□□□ -0.76
RBM39-230ENST00000476806 FYB1O15117 783 aa10.27□□□□□ -0.77
RBM39-230ENST00000476806 CNGB1Q14028 1251 aaPredicted RBP10.27□□□□□ -0.77
RBM39-230ENST00000476806 C14orf37Q86TY3 774 aa10.27□□□□□ -0.77
RBM39-230ENST00000476806 USP54Q70EL1 1684 aa10.27□□□□□ -0.77
RBM39-230ENST00000476806 NALCNQ8IZF0 1738 aa10.27□□□□□ -0.77
RBM39-230ENST00000476806 DMRTA1Q5VZB9 504 aa10.26□□□□□ -0.77
RBM39-230ENST00000476806 C19orf44Q9H6X5 657 aa10.26□□□□□ -0.77
RBM39-230ENST00000476806 STRCP1A6NGW2 1772 aa10.26□□□□□ -0.77
RBM39-230ENST00000476806 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
RBM39-230ENST00000476806 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
RBM39-230ENST00000476806 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
RBM39-230ENST00000476806 MTHFSP49914 203 aa10.25□□□□□ -0.77
RBM39-230ENST00000476806 CALD1Q05682 793 aaKnown RBP10.25□□□□□ -0.77
RBM39-230ENST00000476806 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
RBM39-230ENST00000476806 MFRPQ9BY79 579 aa10.25□□□□□ -0.77
RBM39-230ENST00000476806 ACEP12821 1306 aa10.25□□□□□ -0.77
RBM39-230ENST00000476806 TTC21BQ7Z4L5 1316 aa10.25□□□□□ -0.77
RBM39-230ENST00000476806 MAPK8IP3Q9UPT6 1336 aa10.25□□□□□ -0.77
RBM39-230ENST00000476806 MSH6P52701 1360 aa10.25□□□□□ -0.77
RBM39-230ENST00000476806 OVOS2A0A0J9YW53 1432 aa10.24□□□□□ -0.77
RBM39-230ENST00000476806 OVOS2Q6IE36 1432 aa10.24□□□□□ -0.77
RBM39-230ENST00000476806 DIAPH1O60610 1272 aaKnown RBP10.24□□□□□ -0.77
RBM39-230ENST00000476806 CCDC184Q52MB2 194 aa10.24□□□□□ -0.77
RBM39-230ENST00000476806 RUNDC1Q96C34 613 aa10.24□□□□□ -0.77
RBM39-230ENST00000476806 KCTD12Q96CX2 325 aaKnown RBP10.24□□□□□ -0.77
RBM39-230ENST00000476806 RTL1A6NKG5 1358 aa10.24□□□□□ -0.77
RBM39-230ENST00000476806 RGL2O15211 777 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 ATF3P18847 181 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 PSEN2P49810 448 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 LMOD3Q0VAK6 560 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 CCDC27Q2M243 656 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 PROSER2Q86WR7 435 aaPredicted RBP10.23□□□□□ -0.77
RBM39-230ENST00000476806 KCNH5Q8NCM2 988 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 GGNBP2Q9H3C7 697 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 TAOK2Q9UL54 1235 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
RBM39-230ENST00000476806 RGS20O76081 388 aa10.22□□□□□ -0.77
RBM39-230ENST00000476806 FCHSD2O94868 740 aa10.22□□□□□ -0.77
RBM39-230ENST00000476806 PSME1Q06323 249 aa10.22□□□□□ -0.77
RBM39-230ENST00000476806 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.22□□□□□ -0.77
RBM39-230ENST00000476806 ADAMTS8Q9UP79 889 aa10.22□□□□□ -0.77
RBM39-230ENST00000476806 PRR36Q9H6K5 1346 aa10.22□□□□□ -0.77
RBM39-230ENST00000476806 SSH2Q76I76 1423 aa10.22□□□□□ -0.77
RBM39-230ENST00000476806 SHPRHQ149N8 1683 aa10.22□□□□□ -0.77
RBM39-230ENST00000476806 E9PSI1 815 aa10.21□□□□□ -0.77
RBM39-230ENST00000476806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.21□□□□□ -0.77
RBM39-230ENST00000476806 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.77
RBM39-230ENST00000476806 CT47B1P0C2W7 299 aaPredicted RBP10.2□□□□□ -0.78
RBM39-230ENST00000476806 U2AF1L5P0DN76 240 aaPredicted RBP10.2□□□□□ -0.78
RBM39-230ENST00000476806 FLT4P35916 1363 aa10.2□□□□□ -0.78
RBM39-230ENST00000476806 HAP1P54257 671 aaPredicted RBP10.2□□□□□ -0.78
RBM39-230ENST00000476806 U2AF1Q01081 240 aaKnown RBP eCLIP10.2□□□□□ -0.783e-7■□□□□ 9.7
RBM39-230ENST00000476806 COL3A1P02461 1466 aaPredicted RBP10.19□□□□□ -0.78
RBM39-230ENST00000476806 MST1RQ04912 1400 aa10.19□□□□□ -0.78
RBM39-230ENST00000476806 SBNO1A3KN83 1393 aa10.19□□□□□ -0.78
RBM39-230ENST00000476806 PLEKHG2Q9H7P9 1386 aa10.19□□□□□ -0.78
RBM39-230ENST00000476806 NPHP3Q7Z494 1330 aa10.19□□□□□ -0.78
RBM39-230ENST00000476806 WDR63Q8IWG1 891 aa10.19□□□□□ -0.78
RBM39-230ENST00000476806 IRX2Q9BZI1 471 aaPredicted RBP10.19□□□□□ -0.78
RBM39-230ENST00000476806 MAP2P11137 1827 aaKnown RBP10.19□□□□□ -0.78
RBM39-230ENST00000476806 ABCC6O95255 1503 aa10.18□□□□□ -0.78
RBM39-230ENST00000476806 TNNT2P45379 298 aaPredicted RBP10.18□□□□□ -0.78
RBM39-230ENST00000476806 IFFO2Q5TF58 517 aa10.18□□□□□ -0.78
RBM39-230ENST00000476806 TMC2Q8TDI7 906 aa10.18□□□□□ -0.78
RBM39-230ENST00000476806 MYH16Q9H6N6 1097 aa10.18□□□□□ -0.78
RBM39-230ENST00000476806 IL16Q14005 1332 aa10.17□□□□□ -0.78
RBM39-230ENST00000476806 POLKQ9UBT6 870 aa10.17□□□□□ -0.78
RBM39-230ENST00000476806 PHRF1Q9P1Y6 1649 aaKnown RBP10.17□□□□□ -0.78
RBM39-230ENST00000476806 C1orf167Q5SNV9 1468 aa10.17□□□□□ -0.78
RBM39-230ENST00000476806 ARHGEF10O15013 1369 aa10.16□□□□□ -0.78
RBM39-230ENST00000476806 TMEM94Q12767 1356 aa10.16□□□□□ -0.78
RBM39-230ENST00000476806 U2SURPO15042 1029 aaKnown RBP10.16□□□□□ -0.78
RBM39-230ENST00000476806 ESCO1Q5FWF5 840 aa10.16□□□□□ -0.78
RBM39-230ENST00000476806 NME9Q86XW9 330 aa10.16□□□□□ -0.78
RBM39-230ENST00000476806 ZNF428Q96B54 188 aa10.16□□□□□ -0.78
RBM39-230ENST00000476806 RBM33Q96EV2 1170 aaKnown RBP10.16□□□□□ -0.78
RBM39-230ENST00000476806 PIK3C2AO00443 1686 aa10.15□□□□□ -0.78
RBM39-230ENST00000476806 ZNF521Q96K83 1311 aa10.15□□□□□ -0.78
RBM39-230ENST00000476806 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
RBM39-230ENST00000476806 STK24Q9Y6E0 443 aa10.15□□□□□ -0.78
RBM39-230ENST00000476806 RGPD8O14715 1765 aaPredicted RBP10.15□□□□□ -0.78
RBM39-230ENST00000476806 APAF1O14727 1248 aa10.14□□□□□ -0.79
RBM39-230ENST00000476806 AMPHP49418 695 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms