RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
CCNL1-217ENST00000476367 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
CCNL1-217ENST00000476367 TATP17735 454 aaPredicted RBP19.33■□□□□ 0.69
CCNL1-217ENST00000476367 SBF2Q86WG5 1849 aa19.33■□□□□ 0.68
CCNL1-217ENST00000476367 AEBP1Q8IUX7 1158 aa19.32■□□□□ 0.68
CCNL1-217ENST00000476367 MARCH10Q8NA82 808 aaPredicted RBP19.31■□□□□ 0.68
CCNL1-217ENST00000476367 KAT6BQ8WYB5 2073 aa19.31■□□□□ 0.68
CCNL1-217ENST00000476367 TNS1Q9HBL0 1735 aaKnown RBP19.31■□□□□ 0.68
CCNL1-217ENST00000476367 KDRP35968 1356 aa19.3■□□□□ 0.68
CCNL1-217ENST00000476367 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
CCNL1-217ENST00000476367 SULT6B1Q6IMI4 303 aa19.3■□□□□ 0.68
CCNL1-217ENST00000476367 UPF1Q92900 1129 aaKnown RBP eCLIP19.3■□□□□ 0.68
CCNL1-217ENST00000476367 ZCRB1Q8TBF4 217 aaKnown RBP19.29■□□□□ 0.68
CCNL1-217ENST00000476367 DDX54Q8TDD1 881 aaKnown RBP19.29■□□□□ 0.68
CCNL1-217ENST00000476367 DOT1LQ8TEK3 1739 aa19.29■□□□□ 0.68
CCNL1-217ENST00000476367 HMOX1P09601 288 aa19.29■□□□□ 0.68
CCNL1-217ENST00000476367 FAM196AQ6ZSG2 479 aa19.29■□□□□ 0.68
CCNL1-217ENST00000476367 NHSQ6T4R5 1651 aa19.26■□□□□ 0.67
CCNL1-217ENST00000476367 PCDH11XQ9BZA7 1347 aa19.26■□□□□ 0.67
CCNL1-217ENST00000476367 PCDH11YQ9BZA8 1340 aa19.26■□□□□ 0.67
CCNL1-217ENST00000476367 PNISRQ8TF01 805 aaKnown RBP19.25■□□□□ 0.67
CCNL1-217ENST00000476367 TRIM37O94972 964 aa19.25■□□□□ 0.67
CCNL1-217ENST00000476367 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
CCNL1-217ENST00000476367 MRS2Q9HD23 443 aa19.24■□□□□ 0.67
CCNL1-217ENST00000476367 SPG7Q9UQ90 795 aa19.24■□□□□ 0.67
CCNL1-217ENST00000476367 RSPH6AQ9H0K4 717 aa19.23■□□□□ 0.67
CCNL1-217ENST00000476367 TOGARAM1Q9Y4F4 1720 aa19.23■□□□□ 0.67
CCNL1-217ENST00000476367 CCER2I3L3R5 266 aa19.22■□□□□ 0.67
CCNL1-217ENST00000476367 BCL9O00512 1426 aa19.22■□□□□ 0.67
CCNL1-217ENST00000476367 CYP27B1O15528 508 aa19.22■□□□□ 0.67
CCNL1-217ENST00000476367 U2AF1L5P0DN76 240 aaPredicted RBP19.22■□□□□ 0.67
CCNL1-217ENST00000476367 U2AF1Q01081 240 aaKnown RBP eCLIP19.22■□□□□ 0.673e-15■■■■□ 23.4
CCNL1-217ENST00000476367 SF3B2Q13435 895 aaKnown RBP19.22■□□□□ 0.67
CCNL1-217ENST00000476367 ACSBG1Q96GR2 724 aa19.22■□□□□ 0.67
CCNL1-217ENST00000476367 ADAMTS8Q9UP79 889 aa19.22■□□□□ 0.67
CCNL1-217ENST00000476367 PLEKHG2Q9H7P9 1386 aa19.21■□□□□ 0.67
CCNL1-217ENST00000476367 BTAF1O14981 1849 aa19.21■□□□□ 0.67
CCNL1-217ENST00000476367 VIRMAQ69YN4 1812 aaKnown RBP19.21■□□□□ 0.67
CCNL1-217ENST00000476367 PLEKHF1Q96S99 279 aa19.21■□□□□ 0.67
CCNL1-217ENST00000476367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.2■□□□□ 0.662e-9■■■□□ 15.6
CCNL1-217ENST00000476367 ITGB4P16144 1822 aa19.2■□□□□ 0.66
CCNL1-217ENST00000476367 PLEKHO1Q53GL0 409 aaPredicted RBP19.19■□□□□ 0.66
CCNL1-217ENST00000476367 ZNF530Q6P9A1 599 aaPredicted RBP19.19■□□□□ 0.66
CCNL1-217ENST00000476367 PTF1AQ7RTS3 328 aa19.18■□□□□ 0.66
CCNL1-217ENST00000476367 CCDC125Q86Z20 511 aa19.18■□□□□ 0.66
CCNL1-217ENST00000476367 PHACTR3Q96KR7 559 aa19.18■□□□□ 0.66
CCNL1-217ENST00000476367 KCNQ2O43526 872 aa19.18■□□□□ 0.66
CCNL1-217ENST00000476367 PRKAR2BP31323 418 aa19.18■□□□□ 0.66
CCNL1-217ENST00000476367 FCHSD2O94868 740 aa19.17■□□□□ 0.66
CCNL1-217ENST00000476367 PHKG2P15735 406 aa19.17■□□□□ 0.66
CCNL1-217ENST00000476367 AMOTQ4VCS5 1084 aa19.17■□□□□ 0.66
CCNL1-217ENST00000476367 DEFB132Q7Z7B7 95 aa19.17■□□□□ 0.66
CCNL1-217ENST00000476367 IFNL2Q8IZJ0 200 aa19.17■□□□□ 0.66
CCNL1-217ENST00000476367 SYTL4Q96C24 671 aaPredicted RBP19.17■□□□□ 0.66
CCNL1-217ENST00000476367 DLG5Q8TDM6 1919 aa19.17■□□□□ 0.66
CCNL1-217ENST00000476367 APBA3O96018 575 aa19.15■□□□□ 0.66
CCNL1-217ENST00000476367 BAG6P46379 1132 aa19.15■□□□□ 0.66
CCNL1-217ENST00000476367 BCL11BQ9C0K0 894 aaPredicted RBP19.15■□□□□ 0.66
CCNL1-217ENST00000476367 SCN11AQ9UI33 1791 aa19.15■□□□□ 0.66
CCNL1-217ENST00000476367 C1orf141Q5JVX7 400 aa19.14■□□□□ 0.66
CCNL1-217ENST00000476367 RGPD3A6NKT7 1758 aaPredicted RBP19.14■□□□□ 0.65
CCNL1-217ENST00000476367 RGPD4Q7Z3J3 1758 aa19.14■□□□□ 0.65
CCNL1-217ENST00000476367 KDM6AO15550 1401 aaPredicted RBP19.13■□□□□ 0.65
CCNL1-217ENST00000476367 PRIM1P49642 420 aaKnown RBP19.13■□□□□ 0.65
CCNL1-217ENST00000476367 EN1Q05925 392 aaPredicted RBP19.13■□□□□ 0.65
CCNL1-217ENST00000476367 MTHFSDQ2M296 383 aaKnown RBP19.13■□□□□ 0.65
CCNL1-217ENST00000476367 RREB1Q92766 1687 aa19.12■□□□□ 0.65
CCNL1-217ENST00000476367 WDR43Q15061 677 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCNL1-217ENST00000476367 NKX1-1Q15270 411 aaPredicted RBP19.11■□□□□ 0.65
CCNL1-217ENST00000476367 CCDC146Q8IYE0 955 aa19.11■□□□□ 0.65
CCNL1-217ENST00000476367 ADAMTS7Q9UKP4 1686 aa19.1■□□□□ 0.65
CCNL1-217ENST00000476367 HSP90AB1P08238 724 aaKnown RBP19.1■□□□□ 0.65
CCNL1-217ENST00000476367 MPRIPQ6WCQ1 1025 aa19.1■□□□□ 0.65
CCNL1-217ENST00000476367 FAM9BQ8IZU0 186 aa19.1■□□□□ 0.65
CCNL1-217ENST00000476367 NUP188Q5SRE5 1749 aa19.09■□□□□ 0.65
CCNL1-217ENST00000476367 AKAP4Q5JQC9 854 aa19.09■□□□□ 0.65
CCNL1-217ENST00000476367 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
CCNL1-217ENST00000476367 NEFMP07197 916 aa19.08■□□□□ 0.65
CCNL1-217ENST00000476367 EZH2Q15910 746 aaKnown RBP19.08■□□□□ 0.65
CCNL1-217ENST00000476367 GAS2L2Q8NHY3 880 aa19.08■□□□□ 0.65
CCNL1-217ENST00000476367 MAP3K5Q99683 1374 aa19.08■□□□□ 0.64
CCNL1-217ENST00000476367 MAPK8IP3Q9UPT6 1336 aa19.07■□□□□ 0.64
CCNL1-217ENST00000476367 LY75O60449 1722 aa19.07■□□□□ 0.64
CCNL1-217ENST00000476367 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
CCNL1-217ENST00000476367 CAMKK2Q96RR4 588 aa19.06■□□□□ 0.64
CCNL1-217ENST00000476367 TMOD3Q9NYL9 352 aa19.06■□□□□ 0.64
CCNL1-217ENST00000476367 SENP3-EIF4A1A0A087X0R7 540 aa19.04■□□□□ 0.64
CCNL1-217ENST00000476367 PNNQ9H307 717 aaKnown RBP19.04■□□□□ 0.64
CCNL1-217ENST00000476367 MRC1P22897 1456 aa19.04■□□□□ 0.64
CCNL1-217ENST00000476367 GNAT3A8MTJ3 354 aa19.03■□□□□ 0.64
CCNL1-217ENST00000476367 PLSCR1O15162 318 aa19.03■□□□□ 0.64
CCNL1-217ENST00000476367 CABP4P57796 275 aa19.03■□□□□ 0.64
CCNL1-217ENST00000476367 PIGBQ92521 554 aa19.03■□□□□ 0.64
CCNL1-217ENST00000476367 LGR6Q9HBX8 967 aa19.03■□□□□ 0.64
CCNL1-217ENST00000476367 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
CCNL1-217ENST00000476367 APAF1O14727 1248 aa19.03■□□□□ 0.64
CCNL1-217ENST00000476367 RNMTO43148 476 aaKnown RBP19.03■□□□□ 0.64
CCNL1-217ENST00000476367 TMPOP42166 694 aaKnown RBP19.03■□□□□ 0.64
CCNL1-217ENST00000476367 SIPA1L3O60292 1781 aaPredicted RBP19.02■□□□□ 0.64
CCNL1-217ENST00000476367 NFE2L2Q16236 605 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms