RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 NSD2O96028 1365 aa29.01■■■□□ 2.23
HDAC11-217ENST00000475818 SBNO2Q9Y2G9 1366 aa29.01■■■□□ 2.23
HDAC11-217ENST00000475818 ROCK2O75116 1388 aaKnown RBP29■■■□□ 2.23
HDAC11-217ENST00000475818 USP54Q70EL1 1684 aa28.99■■■□□ 2.23
HDAC11-217ENST00000475818 DOT1LQ8TEK3 1739 aa28.97■■■□□ 2.23
HDAC11-217ENST00000475818 TMC1Q8TDI8 760 aa28.97■■■□□ 2.23
HDAC11-217ENST00000475818 CD163L1Q9NR16 1453 aa28.97■■■□□ 2.23
HDAC11-217ENST00000475818 LY75O60449 1722 aa28.95■■■□□ 2.23
HDAC11-217ENST00000475818 IP6K1Q92551 441 aa28.95■■■□□ 2.22
HDAC11-217ENST00000475818 ADCY9O60503 1353 aa28.94■■■□□ 2.22
HDAC11-217ENST00000475818 HDGFL2Q7Z4V5 671 aaPredicted RBP28.93■■■□□ 2.22
HDAC11-217ENST00000475818 CD2APQ9Y5K6 639 aa28.92■■■□□ 2.22
HDAC11-217ENST00000475818 ZCRB1Q8TBF4 217 aaKnown RBP28.91■■■□□ 2.22
HDAC11-217ENST00000475818 WWC3Q9ULE0 1092 aa28.91■■■□□ 2.22
HDAC11-217ENST00000475818 USP47Q96K76 1375 aa28.9■■■□□ 2.22
HDAC11-217ENST00000475818 SLC12A5Q9H2X9 1139 aa28.9■■■□□ 2.22
HDAC11-217ENST00000475818 EDC4Q6P2E9 1401 aaKnown RBP28.89■■■□□ 2.22
HDAC11-217ENST00000475818 MEGF6O75095 1541 aa28.87■■■□□ 2.21
HDAC11-217ENST00000475818 FAM208AQ9UK61 1670 aaKnown RBP28.86■■■□□ 2.21
HDAC11-217ENST00000475818 A0A1W2PP64 1363 aa28.84■■■□□ 2.21
HDAC11-217ENST00000475818 SIN3AQ96ST3 1273 aa28.83■■■□□ 2.21
HDAC11-217ENST00000475818 MAP3K19Q56UN5 1328 aa28.83■■■□□ 2.21
HDAC11-217ENST00000475818 FBLN1P23142 703 aa28.82■■■□□ 2.2
HDAC11-217ENST00000475818 HOXC9P31274 260 aa28.82■■■□□ 2.2
HDAC11-217ENST00000475818 TERF2IPQ9NYB0 399 aa28.82■■■□□ 2.2
HDAC11-217ENST00000475818 IGSF1Q8N6C5 1336 aa28.81■■■□□ 2.2
HDAC11-217ENST00000475818 AMPHP49418 695 aa28.81■■■□□ 2.2
HDAC11-217ENST00000475818 KIF3CO14782 793 aa28.8■■■□□ 2.2
HDAC11-217ENST00000475818 FLAD1Q8NFF5 587 aa28.8■■■□□ 2.2
HDAC11-217ENST00000475818 C5P01031 1676 aa28.8■■■□□ 2.2
HDAC11-217ENST00000475818 NEUROD1Q13562 356 aa28.78■■■□□ 2.2
HDAC11-217ENST00000475818 USHBP1Q8N6Y0 703 aa28.78■■■□□ 2.2
HDAC11-217ENST00000475818 RGPD2P0DJD1 1756 aa28.77■■■□□ 2.2
HDAC11-217ENST00000475818 PALLDQ8WX93 1383 aa28.76■■■□□ 2.2
HDAC11-217ENST00000475818 SMIM5Q71RC9 77 aa28.76■■■□□ 2.19
HDAC11-217ENST00000475818 PHF14O94880 888 aa28.75■■■□□ 2.19
HDAC11-217ENST00000475818 AMIGO3Q86WK7 504 aa28.75■■■□□ 2.19
HDAC11-217ENST00000475818 COG3Q96JB2 828 aa28.75■■■□□ 2.19
HDAC11-217ENST00000475818 NBPF6Q5VWK0 638 aa28.74■■■□□ 2.19
HDAC11-217ENST00000475818 AK7Q96M32 723 aa28.74■■■□□ 2.19
HDAC11-217ENST00000475818 NBPF4Q96M43 638 aa28.74■■■□□ 2.19
HDAC11-217ENST00000475818 APLP1P51693 650 aa28.72■■■□□ 2.19
HDAC11-217ENST00000475818 MPRIPQ6WCQ1 1025 aa28.72■■■□□ 2.19
HDAC11-217ENST00000475818 RAPGEF4Q8WZA2 1011 aa28.72■■■□□ 2.19
HDAC11-217ENST00000475818 CARD11Q9BXL7 1154 aa28.72■■■□□ 2.19
HDAC11-217ENST00000475818 CGNL1Q0VF96 1302 aa28.69■■■□□ 2.18
HDAC11-217ENST00000475818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.68■■■□□ 2.18
HDAC11-217ENST00000475818 TATP17735 454 aaPredicted RBP28.68■■■□□ 2.18
HDAC11-217ENST00000475818 RRS1Q15050 365 aaKnown RBP28.68■■■□□ 2.18
HDAC11-217ENST00000475818 C4BP0C0L5 1744 aa28.68■■■□□ 2.18
HDAC11-217ENST00000475818 TAF1LQ8IZX4 1826 aa28.67■■■□□ 2.18
HDAC11-217ENST00000475818 HMGB2P26583 209 aaKnown RBP28.67■■■□□ 2.18
HDAC11-217ENST00000475818 TOGARAM1Q9Y4F4 1720 aa28.66■■■□□ 2.18
HDAC11-217ENST00000475818 PCDH11XQ9BZA7 1347 aa28.66■■■□□ 2.18
HDAC11-217ENST00000475818 PCDH11YQ9BZA8 1340 aa28.66■■■□□ 2.18
HDAC11-217ENST00000475818 DNAJC5GQ8N7S2 189 aa28.65■■■□□ 2.18
HDAC11-217ENST00000475818 RTL1A6NKG5 1358 aa28.64■■■□□ 2.18
HDAC11-217ENST00000475818 SMARCC1Q92922 1105 aaPredicted RBP28.63■■■□□ 2.17
HDAC11-217ENST00000475818 SMG6Q86US8 1419 aaKnown RBP28.62■■■□□ 2.17
HDAC11-217ENST00000475818 TOMM70O94826 608 aa28.61■■■□□ 2.17
HDAC11-217ENST00000475818 CYP27B1O15528 508 aa28.6■■■□□ 2.17
HDAC11-217ENST00000475818 CICQ96RK0 1608 aaPredicted RBP28.6■■■□□ 2.17
HDAC11-217ENST00000475818 NSD3Q9BZ95 1437 aa28.6■■■□□ 2.17
HDAC11-217ENST00000475818 SSFA2P28290 1259 aa28.59■■■□□ 2.17
HDAC11-217ENST00000475818 PUS7Q96PZ0 661 aaKnown RBP28.59■■■□□ 2.17
HDAC11-217ENST00000475818 UBR3Q6ZT12 1888 aa28.59■■■□□ 2.17
HDAC11-217ENST00000475818 LINC00116Q8NCU8 138 aa28.58■■■□□ 2.17
HDAC11-217ENST00000475818 PIGBQ92521 554 aa28.58■■■□□ 2.17
HDAC11-217ENST00000475818 NMRK2Q9NPI5 230 aa28.57■■■□□ 2.16
HDAC11-217ENST00000475818 HSP90AB2PQ58FF8 381 aa28.56■■■□□ 2.16
HDAC11-217ENST00000475818 GGNBP2Q9H3C7 697 aa28.56■■■□□ 2.16
HDAC11-217ENST00000475818 BCS1LQ9Y276 419 aa28.56■■■□□ 2.16
HDAC11-217ENST00000475818 PXDNLA1KZ92 1463 aa28.55■■■□□ 2.16
HDAC11-217ENST00000475818 GNPATO15228 680 aa28.54■■■□□ 2.16
HDAC11-217ENST00000475818 CAPN15O75808 1086 aa28.54■■■□□ 2.16
HDAC11-217ENST00000475818 MMP10P09238 476 aa28.54■■■□□ 2.16
HDAC11-217ENST00000475818 HTRA3P83110 453 aa28.54■■■□□ 2.16
HDAC11-217ENST00000475818 LOC102724428A0A0B4J2F2 783 aa28.53■■■□□ 2.16
HDAC11-217ENST00000475818 SIK1P57059 783 aa28.53■■■□□ 2.16
HDAC11-217ENST00000475818 ARHGAP27Q6ZUM4 889 aa28.53■■■□□ 2.16
HDAC11-217ENST00000475818 A0A0G2JLW4 131 aa28.52■■■□□ 2.16
HDAC11-217ENST00000475818 COL13A1Q5TAT6 717 aaPredicted RBP28.52■■■□□ 2.16
HDAC11-217ENST00000475818 INSRP06213 1382 aa28.51■■■□□ 2.16
HDAC11-217ENST00000475818 ITGB4P16144 1822 aa28.51■■■□□ 2.15
HDAC11-217ENST00000475818 FYB1O15117 783 aa28.5■■■□□ 2.15
HDAC11-217ENST00000475818 ITPK1Q13572 414 aa28.5■■■□□ 2.15
HDAC11-217ENST00000475818 TESK2Q96S53 571 aa28.48■■■□□ 2.15
HDAC11-217ENST00000475818 WDR90Q96KV7 1748 aa28.47■■■□□ 2.15
HDAC11-217ENST00000475818 TGFB2P61812 414 aa28.47■■■□□ 2.15
HDAC11-217ENST00000475818 MAP2P11137 1827 aaKnown RBP28.46■■■□□ 2.15
HDAC11-217ENST00000475818 ATP6V1AP38606 617 aa28.46■■■□□ 2.15
HDAC11-217ENST00000475818 C16orf71Q8IYS4 520 aaPredicted RBP28.46■■■□□ 2.15
HDAC11-217ENST00000475818 RBM46Q8TBY0 533 aaKnown RBP28.46■■■□□ 2.15
HDAC11-217ENST00000475818 KLRG1Q96E93 195 aa28.46■■■□□ 2.15
HDAC11-217ENST00000475818 ASAP1Q9ULH1 1129 aa28.46■■■□□ 2.15
HDAC11-217ENST00000475818 N4BP2Q86UW6 1770 aaPredicted RBP28.46■■■□□ 2.15
HDAC11-217ENST00000475818 FLT4P35916 1363 aa28.46■■■□□ 2.15
HDAC11-217ENST00000475818 KIAA1551Q9HCM1 1747 aa28.46■■■□□ 2.15
HDAC11-217ENST00000475818 FCHSD2O94868 740 aa28.45■■■□□ 2.14
HDAC11-217ENST00000475818 TMOD3Q9NYL9 352 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms