RNA–Protein interactions for RNA: ENST00000475514.5

REPIN1-208, Transcript of replication initiator 1, humanhuman

TSL 5

Gene REPIN1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-208ENST00000475514 PRIM1P49642 420 aaKnown RBP28.58■■■□□ 2.17
REPIN1-208ENST00000475514 SHANK3Q9BYB0 1731 aa28.56■■■□□ 2.16
REPIN1-208ENST00000475514 NLGN2Q8NFZ4 835 aa28.55■■■□□ 2.16
REPIN1-208ENST00000475514 ANKRD36BQ8N2N9 1353 aa28.54■■■□□ 2.16
REPIN1-208ENST00000475514 GOLGB1Q14789 3259 aaKnown RBP28.53■■■□□ 2.16
REPIN1-208ENST00000475514 GIGYF1O75420 1035 aaPredicted RBP28.52■■■□□ 2.16
REPIN1-208ENST00000475514 NSD2O96028 1365 aa28.51■■■□□ 2.16
REPIN1-208ENST00000475514 MAP3K19Q56UN5 1328 aa28.51■■■□□ 2.15
REPIN1-208ENST00000475514 MSH5O43196 834 aa28.5■■■□□ 2.15
REPIN1-208ENST00000475514 FBLN1P23142 703 aa28.5■■■□□ 2.15
REPIN1-208ENST00000475514 HOXC9P31274 260 aa28.5■■■□□ 2.15
REPIN1-208ENST00000475514 AMPHP49418 695 aa28.5■■■□□ 2.15
REPIN1-208ENST00000475514 ZCRB1Q8TBF4 217 aaKnown RBP28.5■■■□□ 2.15
REPIN1-208ENST00000475514 COG3Q96JB2 828 aa28.5■■■□□ 2.15
REPIN1-208ENST00000475514 MEGF6O75095 1541 aa28.49■■■□□ 2.15
REPIN1-208ENST00000475514 CCNL1Q9UK58 526 aaPredicted RBP28.49■■■□□ 2.15
REPIN1-208ENST00000475514 PUS7Q96PZ0 661 aaKnown RBP28.45■■■□□ 2.14
REPIN1-208ENST00000475514 YBX3P16989 372 aaKnown RBP eCLIP28.44■■■□□ 2.141e-11■□□□□ 10.7
REPIN1-208ENST00000475514 COL23A1Q86Y22 540 aaPredicted RBP28.44■■■□□ 2.14
REPIN1-208ENST00000475514 USP47Q96K76 1375 aa28.44■■■□□ 2.14
REPIN1-208ENST00000475514 MSL1Q68DK7 614 aa28.43■■■□□ 2.14
REPIN1-208ENST00000475514 USHBP1Q8N6Y0 703 aa28.41■■■□□ 2.14
REPIN1-208ENST00000475514 C5P01031 1676 aa28.41■■■□□ 2.14
REPIN1-208ENST00000475514 GRIN3BO60391 1043 aa28.4■■■□□ 2.14
REPIN1-208ENST00000475514 TONSLQ96HA7 1378 aa28.39■■■□□ 2.14
REPIN1-208ENST00000475514 RRS1Q15050 365 aaKnown RBP28.39■■■□□ 2.14
REPIN1-208ENST00000475514 NBPF6Q5VWK0 638 aa28.39■■■□□ 2.14
REPIN1-208ENST00000475514 NBPF4Q96M43 638 aa28.39■■■□□ 2.14
REPIN1-208ENST00000475514 RTL1A6NKG5 1358 aa28.37■■■□□ 2.13
REPIN1-208ENST00000475514 TESK2Q96S53 571 aa28.37■■■□□ 2.13
REPIN1-208ENST00000475514 TAF1LQ8IZX4 1826 aa28.36■■■□□ 2.13
REPIN1-208ENST00000475514 ST20-MTHFSA0A0A6YYL1 179 aa28.36■■■□□ 2.13
REPIN1-208ENST00000475514 RAPGEF4Q8WZA2 1011 aa28.36■■■□□ 2.13
REPIN1-208ENST00000475514 SMG6Q86US8 1419 aaKnown RBP28.34■■■□□ 2.13
REPIN1-208ENST00000475514 GGNBP2Q9H3C7 697 aa28.33■■■□□ 2.13
REPIN1-208ENST00000475514 CGNL1Q0VF96 1302 aa28.33■■■□□ 2.13
REPIN1-208ENST00000475514 TATP17735 454 aaPredicted RBP28.32■■■□□ 2.12
REPIN1-208ENST00000475514 ATP10DQ9P241 1426 aa28.32■■■□□ 2.12
REPIN1-208ENST00000475514 PALLDQ8WX93 1383 aa28.3■■■□□ 2.12
REPIN1-208ENST00000475514 CEP350Q5VT06 3117 aa28.3■■■□□ 2.12
REPIN1-208ENST00000475514 ITGB4P16144 1822 aa28.29■■■□□ 2.12
REPIN1-208ENST00000475514 PCDH11XQ9BZA7 1347 aa28.29■■■□□ 2.12
REPIN1-208ENST00000475514 PCDH11YQ9BZA8 1340 aa28.29■■■□□ 2.12
REPIN1-208ENST00000475514 MPRIPQ6WCQ1 1025 aa28.29■■■□□ 2.12
REPIN1-208ENST00000475514 FYB1O15117 783 aa28.28■■■□□ 2.12
REPIN1-208ENST00000475514 CD2APQ9Y5K6 639 aa28.28■■■□□ 2.12
REPIN1-208ENST00000475514 KIF20BQ96Q89 1820 aa28.27■■■□□ 2.12
REPIN1-208ENST00000475514 C4BP0C0L5 1744 aa28.27■■■□□ 2.12
REPIN1-208ENST00000475514 TOGARAM1Q9Y4F4 1720 aa28.27■■■□□ 2.12
REPIN1-208ENST00000475514 HSP90AB2PQ58FF8 381 aa28.27■■■□□ 2.12
REPIN1-208ENST00000475514 FLAD1Q8NFF5 587 aa28.27■■■□□ 2.12
REPIN1-208ENST00000475514 GPBP1L1Q9HC44 474 aaPredicted RBP28.24■■■□□ 2.11
REPIN1-208ENST00000475514 INSRP06213 1382 aa28.24■■■□□ 2.11
REPIN1-208ENST00000475514 UBR3Q6ZT12 1888 aa28.23■■■□□ 2.11
REPIN1-208ENST00000475514 SLC24A1O60721 1099 aa28.23■■■□□ 2.11
REPIN1-208ENST00000475514 IFFO2Q5TF58 517 aa28.23■■■□□ 2.11
REPIN1-208ENST00000475514 ZNF526Q8TF50 670 aaPredicted RBP28.23■■■□□ 2.11
REPIN1-208ENST00000475514 AK7Q96M32 723 aa28.23■■■□□ 2.11
REPIN1-208ENST00000475514 CYP27B1O15528 508 aa28.22■■■□□ 2.11
REPIN1-208ENST00000475514 WWC3Q9ULE0 1092 aa28.22■■■□□ 2.11
REPIN1-208ENST00000475514 FLT4P35916 1363 aa28.22■■■□□ 2.11
REPIN1-208ENST00000475514 PHF14O94880 888 aa28.21■■■□□ 2.11
REPIN1-208ENST00000475514 HMGB2P26583 209 aaKnown RBP28.21■■■□□ 2.11
REPIN1-208ENST00000475514 SMIM5Q71RC9 77 aa28.21■■■□□ 2.11
REPIN1-208ENST00000475514 AMIGO3Q86WK7 504 aa28.21■■■□□ 2.11
REPIN1-208ENST00000475514 PKD1L3Q7Z443 1732 aa28.2■■■□□ 2.1
REPIN1-208ENST00000475514 SMARCC1Q92922 1105 aaPredicted RBP28.19■■■□□ 2.1
REPIN1-208ENST00000475514 TMF1P82094 1093 aa28.18■■■□□ 2.1
REPIN1-208ENST00000475514 ADCY9O60503 1353 aa28.17■■■□□ 2.1
REPIN1-208ENST00000475514 IGSF1Q8N6C5 1336 aa28.17■■■□□ 2.1
REPIN1-208ENST00000475514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.15■■■□□ 2.1
REPIN1-208ENST00000475514 PIGBQ92521 554 aa28.15■■■□□ 2.1
REPIN1-208ENST00000475514 KIF24Q5T7B8 1368 aa28.14■■■□□ 2.1
REPIN1-208ENST00000475514 MAP2P11137 1827 aaKnown RBP28.14■■■□□ 2.1
REPIN1-208ENST00000475514 EMILIN1Q9Y6C2 1016 aa28.14■■■□□ 2.1
REPIN1-208ENST00000475514 NSD3Q9BZ95 1437 aa28.13■■■□□ 2.09
REPIN1-208ENST00000475514 PPM1GO15355 546 aaPredicted RBP28.1■■■□□ 2.09
REPIN1-208ENST00000475514 HSPA6P17066 643 aa28.1■■■□□ 2.09
REPIN1-208ENST00000475514 LINC00116Q8NCU8 138 aa28.1■■■□□ 2.09
REPIN1-208ENST00000475514 LOC102724428A0A0B4J2F2 783 aa28.09■■■□□ 2.09
REPIN1-208ENST00000475514 SSFA2P28290 1259 aa28.09■■■□□ 2.09
REPIN1-208ENST00000475514 SIK1P57059 783 aa28.09■■■□□ 2.09
REPIN1-208ENST00000475514 SPG7Q9UQ90 795 aa28.08■■■□□ 2.09
REPIN1-208ENST00000475514 NKX1-1Q15270 411 aaPredicted RBP28.07■■■□□ 2.08
REPIN1-208ENST00000475514 GNPATO15228 680 aa28.06■■■□□ 2.08
REPIN1-208ENST00000475514 TMOD3Q9NYL9 352 aa28.06■■■□□ 2.08
REPIN1-208ENST00000475514 NCAPD2Q15021 1401 aa28.06■■■□□ 2.08
REPIN1-208ENST00000475514 ANKRD26Q9UPS8 1709 aa28.06■■■□□ 2.08
REPIN1-208ENST00000475514 CARD14Q9BXL6 1004 aa28.05■■■□□ 2.08
REPIN1-208ENST00000475514 ASAP1Q9ULH1 1129 aa28.05■■■□□ 2.08
REPIN1-208ENST00000475514 ITPK1Q13572 414 aa28.04■■■□□ 2.08
REPIN1-208ENST00000475514 CDCA8Q53HL2 280 aa28.04■■■□□ 2.08
REPIN1-208ENST00000475514 ATP6V1AP38606 617 aa28.03■■■□□ 2.08
REPIN1-208ENST00000475514 N4BP2Q86UW6 1770 aaPredicted RBP28.02■■■□□ 2.08
REPIN1-208ENST00000475514 EYA1Q99502 592 aa28.01■■■□□ 2.07
REPIN1-208ENST00000475514 MMP10P09238 476 aa28■■■□□ 2.07
REPIN1-208ENST00000475514 CICQ96RK0 1608 aaPredicted RBP28■■■□□ 2.07
REPIN1-208ENST00000475514 KIF13BQ9NQT8 1826 aa27.99■■■□□ 2.07
REPIN1-208ENST00000475514 KIF3CO14782 793 aa27.99■■■□□ 2.07
REPIN1-208ENST00000475514 KIAA1551Q9HCM1 1747 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms