RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 SYTL4Q96C24 671 aaPredicted RBP22.62■■□□□ 1.21
ITGB1-211ENST00000475184 ANKRD36BQ8N2N9 1353 aa22.62■■□□□ 1.21
ITGB1-211ENST00000475184 NLGN2Q8NFZ4 835 aa22.61■■□□□ 1.21
ITGB1-211ENST00000475184 LTV1Q96GA3 475 aaPredicted RBP22.61■■□□□ 1.21
ITGB1-211ENST00000475184 TERF2IPQ9NYB0 399 aa22.61■■□□□ 1.21
ITGB1-211ENST00000475184 PRIM1P49642 420 aaKnown RBP22.6■■□□□ 1.21
ITGB1-211ENST00000475184 NSD2O96028 1365 aa22.6■■□□□ 1.21
ITGB1-211ENST00000475184 CARD11Q9BXL7 1154 aa22.58■■□□□ 1.21
ITGB1-211ENST00000475184 C5P01031 1676 aa22.56■■□□□ 1.2
ITGB1-211ENST00000475184 MEGF6O75095 1541 aa22.56■■□□□ 1.2
ITGB1-211ENST00000475184 CCNL1Q9UK58 526 aaPredicted RBP22.55■■□□□ 1.2
ITGB1-211ENST00000475184 TAF1LQ8IZX4 1826 aa22.54■■□□□ 1.2
ITGB1-211ENST00000475184 GRIN3BO60391 1043 aa22.54■■□□□ 1.2
ITGB1-211ENST00000475184 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.2
ITGB1-211ENST00000475184 ZCRB1Q8TBF4 217 aaKnown RBP22.54■■□□□ 1.2
ITGB1-211ENST00000475184 MAP3K19Q56UN5 1328 aa22.54■■□□□ 1.2
ITGB1-211ENST00000475184 HOXC9P31274 260 aa22.53■■□□□ 1.2
ITGB1-211ENST00000475184 MSH5O43196 834 aa22.52■■□□□ 1.2
ITGB1-211ENST00000475184 PUS7Q96PZ0 661 aaKnown RBP22.52■■□□□ 1.2
ITGB1-211ENST00000475184 USP47Q96K76 1375 aa22.51■■□□□ 1.19
ITGB1-211ENST00000475184 AMPHP49418 695 aa22.51■■□□□ 1.19
ITGB1-211ENST00000475184 COL23A1Q86Y22 540 aaPredicted RBP22.51■■□□□ 1.19
ITGB1-211ENST00000475184 COG3Q96JB2 828 aa22.51■■□□□ 1.19
ITGB1-211ENST00000475184 IFFO2Q5TF58 517 aa22.49■■□□□ 1.19
ITGB1-211ENST00000475184 MSL1Q68DK7 614 aa22.48■■□□□ 1.19
ITGB1-211ENST00000475184 RTL1A6NKG5 1358 aa22.48■■□□□ 1.19
ITGB1-211ENST00000475184 ATP10DQ9P241 1426 aa22.48■■□□□ 1.19
ITGB1-211ENST00000475184 FBLN1P23142 703 aa22.47■■□□□ 1.19
ITGB1-211ENST00000475184 ITGB4P16144 1822 aa22.46■■□□□ 1.19
ITGB1-211ENST00000475184 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.18
ITGB1-211ENST00000475184 UBR3Q6ZT12 1888 aa22.43■■□□□ 1.18
ITGB1-211ENST00000475184 NBPF6Q5VWK0 638 aa22.43■■□□□ 1.18
ITGB1-211ENST00000475184 NBPF4Q96M43 638 aa22.43■■□□□ 1.18
ITGB1-211ENST00000475184 CD2APQ9Y5K6 639 aa22.43■■□□□ 1.18
ITGB1-211ENST00000475184 C4BP0C0L5 1744 aa22.43■■□□□ 1.18
ITGB1-211ENST00000475184 TOGARAM1Q9Y4F4 1720 aa22.43■■□□□ 1.18
ITGB1-211ENST00000475184 SMG6Q86US8 1419 aaKnown RBP22.42■■□□□ 1.18
ITGB1-211ENST00000475184 USHBP1Q8N6Y0 703 aa22.42■■□□□ 1.18
ITGB1-211ENST00000475184 RAPGEF4Q8WZA2 1011 aa22.42■■□□□ 1.18
ITGB1-211ENST00000475184 RRS1Q15050 365 aaKnown RBP22.41■■□□□ 1.18
ITGB1-211ENST00000475184 FLAD1Q8NFF5 587 aa22.41■■□□□ 1.18
ITGB1-211ENST00000475184 TESK2Q96S53 571 aa22.41■■□□□ 1.18
ITGB1-211ENST00000475184 KIF20BQ96Q89 1820 aa22.41■■□□□ 1.18
ITGB1-211ENST00000475184 PALLDQ8WX93 1383 aa22.4■■□□□ 1.18
ITGB1-211ENST00000475184 HMGB2P26583 209 aaKnown RBP22.4■■□□□ 1.18
ITGB1-211ENST00000475184 ADCY9O60503 1353 aa22.39■■□□□ 1.18
ITGB1-211ENST00000475184 PCDH11XQ9BZA7 1347 aa22.39■■□□□ 1.18
ITGB1-211ENST00000475184 PCDH11YQ9BZA8 1340 aa22.39■■□□□ 1.18
ITGB1-211ENST00000475184 GPBP1L1Q9HC44 474 aaPredicted RBP22.39■■□□□ 1.17
ITGB1-211ENST00000475184 TATP17735 454 aaPredicted RBP22.38■■□□□ 1.17
ITGB1-211ENST00000475184 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
ITGB1-211ENST00000475184 PKD1L3Q7Z443 1732 aa22.37■■□□□ 1.17
ITGB1-211ENST00000475184 ST20-MTHFSA0A0A6YYL1 179 aa22.36■■□□□ 1.17
ITGB1-211ENST00000475184 MPRIPQ6WCQ1 1025 aa22.36■■□□□ 1.17
ITGB1-211ENST00000475184 MAP2P11137 1827 aaKnown RBP22.35■■□□□ 1.17
ITGB1-211ENST00000475184 FYB1O15117 783 aa22.34■■□□□ 1.17
ITGB1-211ENST00000475184 SLC24A1O60721 1099 aa22.34■■□□□ 1.17
ITGB1-211ENST00000475184 ZNF526Q8TF50 670 aaPredicted RBP22.34■■□□□ 1.17
ITGB1-211ENST00000475184 AK7Q96M32 723 aa22.34■■□□□ 1.17
ITGB1-211ENST00000475184 GGNBP2Q9H3C7 697 aa22.34■■□□□ 1.17
ITGB1-211ENST00000475184 INSRP06213 1382 aa22.34■■□□□ 1.17
ITGB1-211ENST00000475184 IGSF1Q8N6C5 1336 aa22.32■■□□□ 1.16
ITGB1-211ENST00000475184 NSD3Q9BZ95 1437 aa22.32■■□□□ 1.16
ITGB1-211ENST00000475184 CYP27B1O15528 508 aa22.32■■□□□ 1.16
ITGB1-211ENST00000475184 HSPA6P17066 643 aa22.32■■□□□ 1.16
ITGB1-211ENST00000475184 HSP90AB2PQ58FF8 381 aa22.32■■□□□ 1.16
ITGB1-211ENST00000475184 AMIGO3Q86WK7 504 aa22.32■■□□□ 1.16
ITGB1-211ENST00000475184 SMARCC1Q92922 1105 aaPredicted RBP22.32■■□□□ 1.16
ITGB1-211ENST00000475184 FLT4P35916 1363 aa22.32■■□□□ 1.16
ITGB1-211ENST00000475184 KIF24Q5T7B8 1368 aa22.3■■□□□ 1.16
ITGB1-211ENST00000475184 PHF14O94880 888 aa22.3■■□□□ 1.16
ITGB1-211ENST00000475184 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.29■■□□□ 1.16
ITGB1-211ENST00000475184 WWC3Q9ULE0 1092 aa22.29■■□□□ 1.16
ITGB1-211ENST00000475184 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
ITGB1-211ENST00000475184 KIF13BQ9NQT8 1826 aa22.27■■□□□ 1.16
ITGB1-211ENST00000475184 ANKRD26Q9UPS8 1709 aa22.26■■□□□ 1.15
ITGB1-211ENST00000475184 SSFA2P28290 1259 aa22.26■■□□□ 1.15
ITGB1-211ENST00000475184 SMIM5Q71RC9 77 aa22.26■■□□□ 1.15
ITGB1-211ENST00000475184 PIGBQ92521 554 aa22.26■■□□□ 1.15
ITGB1-211ENST00000475184 NCAPD2Q15021 1401 aa22.24■■□□□ 1.15
ITGB1-211ENST00000475184 N4BP2Q86UW6 1770 aaPredicted RBP22.24■■□□□ 1.15
ITGB1-211ENST00000475184 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
ITGB1-211ENST00000475184 LOC102724428A0A0B4J2F2 783 aa22.23■■□□□ 1.15
ITGB1-211ENST00000475184 SIK1P57059 783 aa22.23■■□□□ 1.15
ITGB1-211ENST00000475184 TMF1P82094 1093 aa22.23■■□□□ 1.15
ITGB1-211ENST00000475184 NKX1-1Q15270 411 aaPredicted RBP22.23■■□□□ 1.15
ITGB1-211ENST00000475184 LINC00116Q8NCU8 138 aa22.23■■□□□ 1.15
ITGB1-211ENST00000475184 KIF3CO14782 793 aa22.21■■□□□ 1.15
ITGB1-211ENST00000475184 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
ITGB1-211ENST00000475184 SPG7Q9UQ90 795 aa22.2■■□□□ 1.14
ITGB1-211ENST00000475184 GNPATO15228 680 aa22.19■■□□□ 1.14
ITGB1-211ENST00000475184 TMOD3Q9NYL9 352 aa22.19■■□□□ 1.14
ITGB1-211ENST00000475184 BRCA1P38398 1863 aaKnown RBP22.18■■□□□ 1.14
ITGB1-211ENST00000475184 PXDNLA1KZ92 1463 aa22.18■■□□□ 1.14
ITGB1-211ENST00000475184 ITPK1Q13572 414 aa22.18■■□□□ 1.14
ITGB1-211ENST00000475184 MMP10P09238 476 aa22.17■■□□□ 1.14
ITGB1-211ENST00000475184 ASAP1Q9ULH1 1129 aa22.17■■□□□ 1.14
ITGB1-211ENST00000475184 PPM1GO15355 546 aaPredicted RBP22.16■■□□□ 1.14
ITGB1-211ENST00000475184 ZNF831Q5JPB2 1677 aa22.15■■□□□ 1.14
ITGB1-211ENST00000475184 ATP6V1AP38606 617 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms