RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 OVOS2A0A0G2JMS6 1433 aa24.28■■□□□ 1.48
SNRPB-203ENST00000474384 ZCRB1Q8TBF4 217 aaKnown RBP24.28■■□□□ 1.48
SNRPB-203ENST00000474384 TNS2Q63HR2 1409 aa24.27■■□□□ 1.48
SNRPB-203ENST00000474384 KDRP35968 1356 aa24.27■■□□□ 1.48
SNRPB-203ENST00000474384 U2AF1L5P0DN76 240 aaPredicted RBP24.26■■□□□ 1.47
SNRPB-203ENST00000474384 U2AF1Q01081 240 aaKnown RBP eCLIP24.26■■□□□ 1.47
SNRPB-203ENST00000474384 MARCH10Q8NA82 808 aaPredicted RBP24.26■■□□□ 1.47
SNRPB-203ENST00000474384 DDX54Q8TDD1 881 aaKnown RBP24.25■■□□□ 1.47
SNRPB-203ENST00000474384 DIEXFQ68CQ4 756 aaKnown RBP24.24■■□□□ 1.47
SNRPB-203ENST00000474384 EP400Q96L91 3159 aa24.23■■□□□ 1.47
SNRPB-203ENST00000474384 CCDC184Q52MB2 194 aa24.23■■□□□ 1.47
SNRPB-203ENST00000474384 SPG7Q9UQ90 795 aa24.22■■□□□ 1.47
SNRPB-203ENST00000474384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.21■■□□□ 1.47
SNRPB-203ENST00000474384 PLEKHO1Q53GL0 409 aaPredicted RBP24.2■■□□□ 1.46
SNRPB-203ENST00000474384 SHANK3Q9BYB0 1731 aa24.2■■□□□ 1.46
SNRPB-203ENST00000474384 PKD1L3Q7Z443 1732 aa24.19■■□□□ 1.46
SNRPB-203ENST00000474384 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
SNRPB-203ENST00000474384 RSPH6AQ9H0K4 717 aa24.19■■□□□ 1.46
SNRPB-203ENST00000474384 PCDH11XQ9BZA7 1347 aa24.18■■□□□ 1.46
SNRPB-203ENST00000474384 PCDH11YQ9BZA8 1340 aa24.18■■□□□ 1.46
SNRPB-203ENST00000474384 FCHSD2O94868 740 aa24.18■■□□□ 1.46
SNRPB-203ENST00000474384 PLEKHG2Q9H7P9 1386 aa24.17■■□□□ 1.46
SNRPB-203ENST00000474384 CYP27B1O15528 508 aa24.17■■□□□ 1.46
SNRPB-203ENST00000474384 PRKAR2BP31323 418 aa24.17■■□□□ 1.46
SNRPB-203ENST00000474384 AMOTQ4VCS5 1084 aa24.17■■□□□ 1.46
SNRPB-203ENST00000474384 MRS2Q9HD23 443 aa24.16■■□□□ 1.46
SNRPB-203ENST00000474384 WDR43Q15061 677 aaKnown RBP eCLIP24.15■■□□□ 1.46
SNRPB-203ENST00000474384 ZNF530Q6P9A1 599 aaPredicted RBP24.14■■□□□ 1.45
SNRPB-203ENST00000474384 IFNL2Q8IZJ0 200 aa24.14■■□□□ 1.45
SNRPB-203ENST00000474384 PHKG2P15735 406 aa24.13■■□□□ 1.45
SNRPB-203ENST00000474384 MTHFSDQ2M296 383 aaKnown RBP24.13■■□□□ 1.45
SNRPB-203ENST00000474384 PHACTR3Q96KR7 559 aa24.13■■□□□ 1.45
SNRPB-203ENST00000474384 UPF1Q92900 1129 aaKnown RBP eCLIP24.12■■□□□ 1.45
SNRPB-203ENST00000474384 ADAMTS8Q9UP79 889 aa24.12■■□□□ 1.45
SNRPB-203ENST00000474384 BCL9O00512 1426 aa24.11■■□□□ 1.45
SNRPB-203ENST00000474384 TRIM37O94972 964 aa24.11■■□□□ 1.45
SNRPB-203ENST00000474384 ACSBG1Q96GR2 724 aa24.11■■□□□ 1.45
SNRPB-203ENST00000474384 NKX1-1Q15270 411 aaPredicted RBP24.09■■□□□ 1.45
SNRPB-203ENST00000474384 C1orf141Q5JVX7 400 aa24.09■■□□□ 1.45
SNRPB-203ENST00000474384 PLEKHF1Q96S99 279 aa24.09■■□□□ 1.45
SNRPB-203ENST00000474384 PNNQ9H307 717 aaKnown RBP24.09■■□□□ 1.45
SNRPB-203ENST00000474384 SBF2Q86WG5 1849 aa24.09■■□□□ 1.45
SNRPB-203ENST00000474384 KCNQ2O43526 872 aa24.08■■□□□ 1.45
SNRPB-203ENST00000474384 PNISRQ8TF01 805 aaKnown RBP24.08■■□□□ 1.45
SNRPB-203ENST00000474384 PTF1AQ7RTS3 328 aa24.07■■□□□ 1.44
SNRPB-203ENST00000474384 KAT6BQ8WYB5 2073 aa24.07■■□□□ 1.44
SNRPB-203ENST00000474384 NEFMP07197 916 aa24.06■■□□□ 1.44
SNRPB-203ENST00000474384 AKAP4Q5JQC9 854 aa24.06■■□□□ 1.44
SNRPB-203ENST00000474384 CCDC146Q8IYE0 955 aa24.06■■□□□ 1.44
SNRPB-203ENST00000474384 MIER1Q8N108 512 aa24.06■■□□□ 1.44
SNRPB-203ENST00000474384 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
SNRPB-203ENST00000474384 PRIM1P49642 420 aaKnown RBP24.05■■□□□ 1.44
SNRPB-203ENST00000474384 MPRIPQ6WCQ1 1025 aa24.05■■□□□ 1.44
SNRPB-203ENST00000474384 CCDC125Q86Z20 511 aa24.05■■□□□ 1.44
SNRPB-203ENST00000474384 SYTL4Q96C24 671 aaPredicted RBP24.05■■□□□ 1.44
SNRPB-203ENST00000474384 BCL11BQ9C0K0 894 aaPredicted RBP24.05■■□□□ 1.44
SNRPB-203ENST00000474384 HSP90AB1P08238 724 aaKnown RBP24.04■■□□□ 1.44
SNRPB-203ENST00000474384 MAPK8IP3Q9UPT6 1336 aa24.04■■□□□ 1.44
SNRPB-203ENST00000474384 DOT1LQ8TEK3 1739 aa24.04■■□□□ 1.44
SNRPB-203ENST00000474384 SF3B2Q13435 895 aaKnown RBP24.03■■□□□ 1.44
SNRPB-203ENST00000474384 DCAF5Q96JK2 942 aa24.03■■□□□ 1.44
SNRPB-203ENST00000474384 NHSQ6T4R5 1651 aa24.02■■□□□ 1.44
SNRPB-203ENST00000474384 TOGARAM1Q9Y4F4 1720 aa24.01■■□□□ 1.43
SNRPB-203ENST00000474384 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
SNRPB-203ENST00000474384 APBA3O96018 575 aa24.01■■□□□ 1.43
SNRPB-203ENST00000474384 RUNDC1Q96C34 613 aa24.01■■□□□ 1.43
SNRPB-203ENST00000474384 LGR6Q9HBX8 967 aa24.01■■□□□ 1.43
SNRPB-203ENST00000474384 KDM6AO15550 1401 aaPredicted RBP24.01■■□□□ 1.43
SNRPB-203ENST00000474384 GNAT3A8MTJ3 354 aa24■■□□□ 1.43
SNRPB-203ENST00000474384 TNS1Q9HBL0 1735 aaKnown RBP24■■□□□ 1.43
SNRPB-203ENST00000474384 MAP3K5Q99683 1374 aa24■■□□□ 1.43
SNRPB-203ENST00000474384 FAM9BQ8IZU0 186 aa23.99■■□□□ 1.43
SNRPB-203ENST00000474384 ERVV-2B6SEH9 535 aa23.98■■□□□ 1.43
SNRPB-203ENST00000474384 RNMTO43148 476 aaKnown RBP23.98■■□□□ 1.43
SNRPB-203ENST00000474384 NFE2L2Q16236 605 aa23.98■■□□□ 1.43
SNRPB-203ENST00000474384 ITGB4P16144 1822 aa23.97■■□□□ 1.43
SNRPB-203ENST00000474384 DEFB132Q7Z7B7 95 aa23.97■■□□□ 1.43
SNRPB-203ENST00000474384 BAG6P46379 1132 aa23.96■■□□□ 1.43
SNRPB-203ENST00000474384 TMOD3Q9NYL9 352 aa23.96■■□□□ 1.43
SNRPB-203ENST00000474384 SCN11AQ9UI33 1791 aa23.96■■□□□ 1.43
SNRPB-203ENST00000474384 CABP4P57796 275 aa23.95■■□□□ 1.42
SNRPB-203ENST00000474384 IL17REQ8NFR9 667 aa23.95■■□□□ 1.42
SNRPB-203ENST00000474384 PIGBQ92521 554 aa23.95■■□□□ 1.42
SNRPB-203ENST00000474384 RRP7AQ9Y3A4 280 aaKnown RBP23.95■■□□□ 1.42
SNRPB-203ENST00000474384 BTAF1O14981 1849 aa23.95■■□□□ 1.42
SNRPB-203ENST00000474384 TMPOP42166 694 aaKnown RBP23.94■■□□□ 1.42
SNRPB-203ENST00000474384 EN1Q05925 392 aaPredicted RBP23.94■■□□□ 1.42
SNRPB-203ENST00000474384 VIRMAQ69YN4 1812 aaKnown RBP23.94■■□□□ 1.42
SNRPB-203ENST00000474384 DLG5Q8TDM6 1919 aa23.93■■□□□ 1.42
SNRPB-203ENST00000474384 RIPK4P57078 832 aa23.93■■□□□ 1.42
SNRPB-203ENST00000474384 NEUROD2Q15784 382 aa23.93■■□□□ 1.42
SNRPB-203ENST00000474384 MCM10Q7L590 875 aa23.93■■□□□ 1.42
SNRPB-203ENST00000474384 NFATC2IPQ8NCF5 419 aa23.93■■□□□ 1.42
SNRPB-203ENST00000474384 RTF1Q92541 710 aaKnown RBP23.93■■□□□ 1.42
SNRPB-203ENST00000474384 APAF1O14727 1248 aa23.92■■□□□ 1.42
SNRPB-203ENST00000474384 HTATSF1O43719 755 aaKnown RBP23.92■■□□□ 1.42
SNRPB-203ENST00000474384 DCTN1Q14203 1278 aa23.92■■□□□ 1.42
SNRPB-203ENST00000474384 ADAMTS7Q9UKP4 1686 aa23.92■■□□□ 1.42
SNRPB-203ENST00000474384 PLSCR1O15162 318 aa23.91■■□□□ 1.42
SNRPB-203ENST00000474384 SLC52A2Q9HAB3 445 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms