RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PELP1Q8IZL8 1130 aaKnown RBP17.96■□□□□ 0.47
TRAF4-209ENST00000473421 MEGF6O75095 1541 aa17.95■□□□□ 0.46
TRAF4-209ENST00000473421 YBX3P16989 372 aaKnown RBP eCLIP17.95■□□□□ 0.461e-7■■□□□ 13.9
TRAF4-209ENST00000473421 HOXC9P31274 260 aa17.95■□□□□ 0.46
TRAF4-209ENST00000473421 SLC27A3Q5K4L6 730 aa17.95■□□□□ 0.46
TRAF4-209ENST00000473421 TFCP2L1Q9NZI6 479 aa17.95■□□□□ 0.46
TRAF4-209ENST00000473421 SLC16A10Q8TF71 515 aa17.94■□□□□ 0.46
TRAF4-209ENST00000473421 LY75O60449 1722 aa17.94■□□□□ 0.46
TRAF4-209ENST00000473421 ANKRD36BQ8N2N9 1353 aa17.93■□□□□ 0.46
TRAF4-209ENST00000473421 COL23A1Q86Y22 540 aaPredicted RBP17.93■□□□□ 0.46
TRAF4-209ENST00000473421 USHBP1Q8N6Y0 703 aa17.93■□□□□ 0.46
TRAF4-209ENST00000473421 TESK2Q96S53 571 aa17.93■□□□□ 0.46
TRAF4-209ENST00000473421 TERF2IPQ9NYB0 399 aa17.93■□□□□ 0.46
TRAF4-209ENST00000473421 CEP350Q5VT06 3117 aa17.92■□□□□ 0.46
TRAF4-209ENST00000473421 POLD1P28340 1107 aa17.91■□□□□ 0.46
TRAF4-209ENST00000473421 NBPF6Q5VWK0 638 aa17.91■□□□□ 0.46
TRAF4-209ENST00000473421 MSL1Q68DK7 614 aa17.91■□□□□ 0.46
TRAF4-209ENST00000473421 ZCRB1Q8TBF4 217 aaKnown RBP17.91■□□□□ 0.46
TRAF4-209ENST00000473421 NBPF4Q96M43 638 aa17.91■□□□□ 0.46
TRAF4-209ENST00000473421 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
TRAF4-209ENST00000473421 CCNL1Q9UK58 526 aaPredicted RBP17.9■□□□□ 0.46
TRAF4-209ENST00000473421 AMPHP49418 695 aa17.89■□□□□ 0.45
TRAF4-209ENST00000473421 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
TRAF4-209ENST00000473421 ST20-MTHFSA0A0A6YYL1 179 aa17.88■□□□□ 0.45
TRAF4-209ENST00000473421 AMIGO3Q86WK7 504 aa17.88■□□□□ 0.45
TRAF4-209ENST00000473421 COG3Q96JB2 828 aa17.88■□□□□ 0.45
TRAF4-209ENST00000473421 MSH5O43196 834 aa17.87■□□□□ 0.45
TRAF4-209ENST00000473421 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
TRAF4-209ENST00000473421 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
TRAF4-209ENST00000473421 GGNBP2Q9H3C7 697 aa17.86■□□□□ 0.45
TRAF4-209ENST00000473421 FYB1O15117 783 aa17.85■□□□□ 0.45
TRAF4-209ENST00000473421 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.44
TRAF4-209ENST00000473421 USP47Q96K76 1375 aa17.82■□□□□ 0.44
TRAF4-209ENST00000473421 WWC3Q9ULE0 1092 aa17.82■□□□□ 0.44
TRAF4-209ENST00000473421 CYP27B1O15528 508 aa17.81■□□□□ 0.44
TRAF4-209ENST00000473421 C5P01031 1676 aa17.8■□□□□ 0.44
TRAF4-209ENST00000473421 TAF1LQ8IZX4 1826 aa17.8■□□□□ 0.44
TRAF4-209ENST00000473421 TOGARAM1Q9Y4F4 1720 aa17.8■□□□□ 0.44
TRAF4-209ENST00000473421 ATP10DQ9P241 1426 aa17.8■□□□□ 0.44
TRAF4-209ENST00000473421 MPRIPQ6WCQ1 1025 aa17.79■□□□□ 0.44
TRAF4-209ENST00000473421 TONSLQ96HA7 1378 aa17.79■□□□□ 0.44
TRAF4-209ENST00000473421 GRIN3BO60391 1043 aa17.78■□□□□ 0.44
TRAF4-209ENST00000473421 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
TRAF4-209ENST00000473421 RTL1A6NKG5 1358 aa17.78■□□□□ 0.44
TRAF4-209ENST00000473421 PALLDQ8WX93 1383 aa17.78■□□□□ 0.44
TRAF4-209ENST00000473421 TATP17735 454 aaPredicted RBP17.76■□□□□ 0.43
TRAF4-209ENST00000473421 ZNF526Q8TF50 670 aaPredicted RBP17.76■□□□□ 0.43
TRAF4-209ENST00000473421 ITGB4P16144 1822 aa17.76■□□□□ 0.43
TRAF4-209ENST00000473421 PIGBQ92521 554 aa17.75■□□□□ 0.43
TRAF4-209ENST00000473421 CARD14Q9BXL6 1004 aa17.75■□□□□ 0.43
TRAF4-209ENST00000473421 CD2APQ9Y5K6 639 aa17.75■□□□□ 0.43
TRAF4-209ENST00000473421 INSRP06213 1382 aa17.75■□□□□ 0.43
TRAF4-209ENST00000473421 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
TRAF4-209ENST00000473421 CGNL1Q0VF96 1302 aa17.74■□□□□ 0.43
TRAF4-209ENST00000473421 PHF14O94880 888 aa17.74■□□□□ 0.43
TRAF4-209ENST00000473421 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
TRAF4-209ENST00000473421 IFFO2Q5TF58 517 aa17.73■□□□□ 0.43
TRAF4-209ENST00000473421 ADCY9O60503 1353 aa17.73■□□□□ 0.43
TRAF4-209ENST00000473421 UBR3Q6ZT12 1888 aa17.73■□□□□ 0.43
TRAF4-209ENST00000473421 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
TRAF4-209ENST00000473421 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
TRAF4-209ENST00000473421 LINC00116Q8NCU8 138 aa17.72■□□□□ 0.43
TRAF4-209ENST00000473421 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
TRAF4-209ENST00000473421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.71■□□□□ 0.43
TRAF4-209ENST00000473421 IGSF1Q8N6C5 1336 aa17.71■□□□□ 0.42
TRAF4-209ENST00000473421 FLT4P35916 1363 aa17.7■□□□□ 0.42
TRAF4-209ENST00000473421 ITPK1Q13572 414 aa17.7■□□□□ 0.42
TRAF4-209ENST00000473421 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
TRAF4-209ENST00000473421 PKD1L3Q7Z443 1732 aa17.69■□□□□ 0.42
TRAF4-209ENST00000473421 FLAD1Q8NFF5 587 aa17.69■□□□□ 0.42
TRAF4-209ENST00000473421 AK7Q96M32 723 aa17.69■□□□□ 0.42
TRAF4-209ENST00000473421 GPBP1L1Q9HC44 474 aaPredicted RBP17.69■□□□□ 0.42
TRAF4-209ENST00000473421 ASAP1Q9ULH1 1129 aa17.69■□□□□ 0.42
TRAF4-209ENST00000473421 KIF20BQ96Q89 1820 aa17.69■□□□□ 0.42
TRAF4-209ENST00000473421 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
TRAF4-209ENST00000473421 NCAPD2Q15021 1401 aa17.67■□□□□ 0.42
TRAF4-209ENST00000473421 LOC102724428A0A0B4J2F2 783 aa17.67■□□□□ 0.42
TRAF4-209ENST00000473421 SIK1P57059 783 aa17.67■□□□□ 0.42
TRAF4-209ENST00000473421 TMF1P82094 1093 aa17.67■□□□□ 0.42
TRAF4-209ENST00000473421 PPM1GO15355 546 aaPredicted RBP17.66■□□□□ 0.42
TRAF4-209ENST00000473421 SMARCC1Q92922 1105 aaPredicted RBP17.66■□□□□ 0.42
TRAF4-209ENST00000473421 EYA1Q99502 592 aa17.66■□□□□ 0.42
TRAF4-209ENST00000473421 KIF3CO14782 793 aa17.65■□□□□ 0.42
TRAF4-209ENST00000473421 HSPA6P17066 643 aa17.64■□□□□ 0.41
TRAF4-209ENST00000473421 SLC4A9Q96Q91 983 aa17.64■□□□□ 0.41
TRAF4-209ENST00000473421 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
TRAF4-209ENST00000473421 NSD3Q9BZ95 1437 aa17.64■□□□□ 0.41
TRAF4-209ENST00000473421 GNPATO15228 680 aa17.63■□□□□ 0.41
TRAF4-209ENST00000473421 KIF24Q5T7B8 1368 aa17.63■□□□□ 0.41
TRAF4-209ENST00000473421 KIAA1551Q9HCM1 1747 aa17.62■□□□□ 0.41
TRAF4-209ENST00000473421 SSFA2P28290 1259 aa17.62■□□□□ 0.41
TRAF4-209ENST00000473421 MMP10P09238 476 aa17.61■□□□□ 0.41
TRAF4-209ENST00000473421 PHKG2P15735 406 aa17.61■□□□□ 0.41
TRAF4-209ENST00000473421 ATP6V1AP38606 617 aa17.61■□□□□ 0.41
TRAF4-209ENST00000473421 ANKRD26Q9UPS8 1709 aa17.61■□□□□ 0.41
TRAF4-209ENST00000473421 N4BP2Q86UW6 1770 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-209ENST00000473421 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
TRAF4-209ENST00000473421 TMOD3Q9NYL9 352 aa17.6■□□□□ 0.41
TRAF4-209ENST00000473421 POLKQ9UBT6 870 aa17.6■□□□□ 0.41
TRAF4-209ENST00000473421 SPG7Q9UQ90 795 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms