RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 SULT6B1Q6IMI4 303 aa25.43■■□□□ 1.66
CTDSP1-207ENST00000473420 U2SURPO15042 1029 aaKnown RBP25.42■■□□□ 1.66
CTDSP1-207ENST00000473420 AEBP1Q8IUX7 1158 aa25.4■■□□□ 1.66
CTDSP1-207ENST00000473420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.4■■□□□ 1.66
CTDSP1-207ENST00000473420 ZCRB1Q8TBF4 217 aaKnown RBP25.39■■□□□ 1.66
CTDSP1-207ENST00000473420 HMOX1P09601 288 aa25.37■■□□□ 1.65
CTDSP1-207ENST00000473420 BCL9O00512 1426 aa25.37■■□□□ 1.65
CTDSP1-207ENST00000473420 U2AF1L5P0DN76 240 aaPredicted RBP25.36■■□□□ 1.65
CTDSP1-207ENST00000473420 U2AF1Q01081 240 aaKnown RBP eCLIP25.36■■□□□ 1.65
CTDSP1-207ENST00000473420 DIEXFQ68CQ4 756 aaKnown RBP25.36■■□□□ 1.65
CTDSP1-207ENST00000473420 SPG7Q9UQ90 795 aa25.36■■□□□ 1.65
CTDSP1-207ENST00000473420 PCDH11XQ9BZA7 1347 aa25.36■■□□□ 1.65
CTDSP1-207ENST00000473420 PCDH11YQ9BZA8 1340 aa25.36■■□□□ 1.65
CTDSP1-207ENST00000473420 SBF2Q86WG5 1849 aa25.35■■□□□ 1.65
CTDSP1-207ENST00000473420 MARCH10Q8NA82 808 aaPredicted RBP25.35■■□□□ 1.65
CTDSP1-207ENST00000473420 FCHSD2O94868 740 aa25.34■■□□□ 1.65
CTDSP1-207ENST00000473420 AMOTQ4VCS5 1084 aa25.34■■□□□ 1.65
CTDSP1-207ENST00000473420 PLEKHO1Q53GL0 409 aaPredicted RBP25.33■■□□□ 1.65
CTDSP1-207ENST00000473420 FAM196AQ6ZSG2 479 aa25.33■■□□□ 1.65
CTDSP1-207ENST00000473420 RSPH6AQ9H0K4 717 aa25.33■■□□□ 1.65
CTDSP1-207ENST00000473420 FAM182BQ5T319 152 aa25.3■■□□□ 1.64
CTDSP1-207ENST00000473420 DDX54Q8TDD1 881 aaKnown RBP25.3■■□□□ 1.64
CTDSP1-207ENST00000473420 NHSQ6T4R5 1651 aa25.29■■□□□ 1.64
CTDSP1-207ENST00000473420 DOT1LQ8TEK3 1739 aa25.29■■□□□ 1.64
CTDSP1-207ENST00000473420 CYP27B1O15528 508 aa25.28■■□□□ 1.64
CTDSP1-207ENST00000473420 PRKAR2BP31323 418 aa25.28■■□□□ 1.64
CTDSP1-207ENST00000473420 WDR43Q15061 677 aaKnown RBP eCLIP25.28■■□□□ 1.64
CTDSP1-207ENST00000473420 PNNQ9H307 717 aaKnown RBP25.28■■□□□ 1.64
CTDSP1-207ENST00000473420 CCDC184Q52MB2 194 aa25.27■■□□□ 1.64
CTDSP1-207ENST00000473420 IFNL2Q8IZJ0 200 aa25.27■■□□□ 1.64
CTDSP1-207ENST00000473420 TNS1Q9HBL0 1735 aaKnown RBP25.26■■□□□ 1.63
CTDSP1-207ENST00000473420 EP400Q96L91 3159 aa25.26■■□□□ 1.63
CTDSP1-207ENST00000473420 VIRMAQ69YN4 1812 aaKnown RBP25.26■■□□□ 1.63
CTDSP1-207ENST00000473420 MRS2Q9HD23 443 aa25.26■■□□□ 1.63
CTDSP1-207ENST00000473420 PHKG2P15735 406 aa25.25■■□□□ 1.63
CTDSP1-207ENST00000473420 NKX1-1Q15270 411 aaPredicted RBP25.25■■□□□ 1.63
CTDSP1-207ENST00000473420 ZNF530Q6P9A1 599 aaPredicted RBP25.25■■□□□ 1.63
CTDSP1-207ENST00000473420 TOGARAM1Q9Y4F4 1720 aa25.25■■□□□ 1.63
CTDSP1-207ENST00000473420 PLEKHF1Q96S99 279 aa25.23■■□□□ 1.63
CTDSP1-207ENST00000473420 SCN11AQ9UI33 1791 aa25.23■■□□□ 1.63
CTDSP1-207ENST00000473420 ITGB4P16144 1822 aa25.22■■□□□ 1.63
CTDSP1-207ENST00000473420 NEFMP07197 916 aa25.22■■□□□ 1.63
CTDSP1-207ENST00000473420 HSP90AB1P08238 724 aaKnown RBP25.22■■□□□ 1.63
CTDSP1-207ENST00000473420 MTHFSDQ2M296 383 aaKnown RBP25.22■■□□□ 1.63
CTDSP1-207ENST00000473420 C1orf141Q5JVX7 400 aa25.22■■□□□ 1.63
CTDSP1-207ENST00000473420 CCDC125Q86Z20 511 aa25.22■■□□□ 1.63
CTDSP1-207ENST00000473420 GAS2L2Q8NHY3 880 aa25.22■■□□□ 1.63
CTDSP1-207ENST00000473420 ADAMTS7Q9UKP4 1686 aa25.22■■□□□ 1.63
CTDSP1-207ENST00000473420 AKAP4Q5JQC9 854 aa25.21■■□□□ 1.63
CTDSP1-207ENST00000473420 PHACTR3Q96KR7 559 aa25.21■■□□□ 1.63
CTDSP1-207ENST00000473420 ADAMTS8Q9UP79 889 aa25.21■■□□□ 1.63
CTDSP1-207ENST00000473420 DLG5Q8TDM6 1919 aa25.2■■□□□ 1.62
CTDSP1-207ENST00000473420 CCER2I3L3R5 266 aa25.2■■□□□ 1.62
CTDSP1-207ENST00000473420 PNISRQ8TF01 805 aaKnown RBP25.2■■□□□ 1.62
CTDSP1-207ENST00000473420 UPF1Q92900 1129 aaKnown RBP eCLIP25.2■■□□□ 1.624e-7■■■□□ 16.6
CTDSP1-207ENST00000473420 KAT6BQ8WYB5 2073 aa25.2■■□□□ 1.62
CTDSP1-207ENST00000473420 MAPK8IP3Q9UPT6 1336 aa25.18■■□□□ 1.62
CTDSP1-207ENST00000473420 DCAF5Q96JK2 942 aa25.18■■□□□ 1.62
CTDSP1-207ENST00000473420 BTAF1O14981 1849 aa25.18■■□□□ 1.62
CTDSP1-207ENST00000473420 SOCS7O14512 581 aa25.17■■□□□ 1.62
CTDSP1-207ENST00000473420 TRIM37O94972 964 aa25.17■■□□□ 1.62
CTDSP1-207ENST00000473420 BCL11BQ9C0K0 894 aaPredicted RBP25.17■■□□□ 1.62
CTDSP1-207ENST00000473420 RGPD3A6NKT7 1758 aaPredicted RBP25.17■■□□□ 1.62
CTDSP1-207ENST00000473420 RGPD4Q7Z3J3 1758 aa25.17■■□□□ 1.62
CTDSP1-207ENST00000473420 MAP3K5Q99683 1374 aa25.17■■□□□ 1.62
CTDSP1-207ENST00000473420 KDM6AO15550 1401 aaPredicted RBP25.16■■□□□ 1.62
CTDSP1-207ENST00000473420 RUNDC1Q96C34 613 aa25.15■■□□□ 1.62
CTDSP1-207ENST00000473420 ACSBG1Q96GR2 724 aa25.15■■□□□ 1.62
CTDSP1-207ENST00000473420 SF3B2Q13435 895 aaKnown RBP25.14■■□□□ 1.62
CTDSP1-207ENST00000473420 GNAT3A8MTJ3 354 aa25.13■■□□□ 1.61
CTDSP1-207ENST00000473420 MRC1P22897 1456 aa25.13■■□□□ 1.61
CTDSP1-207ENST00000473420 ERVV-2B6SEH9 535 aa25.12■■□□□ 1.61
CTDSP1-207ENST00000473420 KCNQ2O43526 872 aa25.12■■□□□ 1.61
CTDSP1-207ENST00000473420 PRIM1P49642 420 aaKnown RBP25.12■■□□□ 1.61
CTDSP1-207ENST00000473420 MIER1Q8N108 512 aa25.12■■□□□ 1.61
CTDSP1-207ENST00000473420 NFE2L2Q16236 605 aa25.11■■□□□ 1.61
CTDSP1-207ENST00000473420 MPRIPQ6WCQ1 1025 aa25.11■■□□□ 1.61
CTDSP1-207ENST00000473420 HTATSF1O43719 755 aaKnown RBP25.1■■□□□ 1.61
CTDSP1-207ENST00000473420 CCDC146Q8IYE0 955 aa25.1■■□□□ 1.61
CTDSP1-207ENST00000473420 SIPA1L3O60292 1781 aaPredicted RBP25.1■■□□□ 1.61
CTDSP1-207ENST00000473420 RNMTO43148 476 aaKnown RBP25.09■■□□□ 1.61
CTDSP1-207ENST00000473420 SYTL4Q96C24 671 aaPredicted RBP25.09■■□□□ 1.61
CTDSP1-207ENST00000473420 BAG6P46379 1132 aa25.08■■□□□ 1.61
CTDSP1-207ENST00000473420 PTF1AQ7RTS3 328 aa25.08■■□□□ 1.61
CTDSP1-207ENST00000473420 CEMIPQ8WUJ3 1361 aa25.07■■□□□ 1.6
CTDSP1-207ENST00000473420 APBA3O96018 575 aa25.07■■□□□ 1.6
CTDSP1-207ENST00000473420 LY75O60449 1722 aa25.06■■□□□ 1.6
CTDSP1-207ENST00000473420 TMPOP42166 694 aaKnown RBP25.06■■□□□ 1.6
CTDSP1-207ENST00000473420 RTF1Q92541 710 aaKnown RBP25.06■■□□□ 1.6
CTDSP1-207ENST00000473420 LGR6Q9HBX8 967 aa25.06■■□□□ 1.6
CTDSP1-207ENST00000473420 TMOD3Q9NYL9 352 aa25.06■■□□□ 1.6
CTDSP1-207ENST00000473420 RREB1Q92766 1687 aa25.05■■□□□ 1.6
CTDSP1-207ENST00000473420 PLSCR1O15162 318 aa25.05■■□□□ 1.6
CTDSP1-207ENST00000473420 PAPPAQ13219 1627 aa25.04■■□□□ 1.6
CTDSP1-207ENST00000473420 CABP4P57796 275 aa25.04■■□□□ 1.6
CTDSP1-207ENST00000473420 FAM9BQ8IZU0 186 aa25.04■■□□□ 1.6
CTDSP1-207ENST00000473420 IL17REQ8NFR9 667 aa25.04■■□□□ 1.6
CTDSP1-207ENST00000473420 PIGBQ92521 554 aa25.04■■□□□ 1.6
CTDSP1-207ENST00000473420 SLC52A2Q9HAB3 445 aa25.04■■□□□ 1.6
CTDSP1-207ENST00000473420 RIPK4P57078 832 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms