RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 SLC16A10Q8TF71 515 aa27.12■■□□□ 1.93
APTX-218ENST00000473270 CGNL1Q0VF96 1302 aa27.11■■□□□ 1.93
APTX-218ENST00000473270 GGNBP2Q9H3C7 697 aa27.1■■□□□ 1.93
APTX-218ENST00000473270 LRRC4BQ9NT99 713 aa27.1■■□□□ 1.93
APTX-218ENST00000473270 ZEB1P37275 1124 aaPredicted RBP27.09■■□□□ 1.93
APTX-218ENST00000473270 RRS1Q15050 365 aaKnown RBP27.09■■□□□ 1.93
APTX-218ENST00000473270 ZNF827Q17R98 1081 aa27.09■■□□□ 1.93
APTX-218ENST00000473270 KLHL34Q8N239 644 aa27.09■■□□□ 1.93
APTX-218ENST00000473270 USP47Q96K76 1375 aa27.09■■□□□ 1.93
APTX-218ENST00000473270 FBLN1P23142 703 aa27.08■■□□□ 1.93
APTX-218ENST00000473270 FYB1O15117 783 aa27.07■■□□□ 1.92
APTX-218ENST00000473270 TATP17735 454 aaPredicted RBP27.07■■□□□ 1.92
APTX-218ENST00000473270 SGIP1Q9BQI5 828 aa27.06■■□□□ 1.92
APTX-218ENST00000473270 MSH5O43196 834 aa27.05■■□□□ 1.92
APTX-218ENST00000473270 AKT1S1Q96B36 256 aa27.05■■□□□ 1.92
APTX-218ENST00000473270 GPR162Q16538 588 aa27.04■■□□□ 1.92
APTX-218ENST00000473270 CCNL1Q9UK58 526 aaPredicted RBP27.04■■□□□ 1.92
APTX-218ENST00000473270 PAPPAQ13219 1627 aa27.04■■□□□ 1.92
APTX-218ENST00000473270 NBPF6Q5VWK0 638 aa27.03■■□□□ 1.92
APTX-218ENST00000473270 NBPF4Q96M43 638 aa27.03■■□□□ 1.92
APTX-218ENST00000473270 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
APTX-218ENST00000473270 MAP3K5Q99683 1374 aa27■■□□□ 1.91
APTX-218ENST00000473270 PCDH11XQ9BZA7 1347 aa27■■□□□ 1.91
APTX-218ENST00000473270 PCDH11YQ9BZA8 1340 aa27■■□□□ 1.91
APTX-218ENST00000473270 FLT4P35916 1363 aa26.99■■□□□ 1.91
APTX-218ENST00000473270 KCNQ4P56696 695 aa26.99■■□□□ 1.91
APTX-218ENST00000473270 PELP1Q8IZL8 1130 aaKnown RBP26.99■■□□□ 1.91
APTX-218ENST00000473270 MEGF6O75095 1541 aa26.99■■□□□ 1.91
APTX-218ENST00000473270 PNPLA7Q6ZV29 1317 aa26.98■■□□□ 1.91
APTX-218ENST00000473270 INSRP06213 1382 aa26.97■■□□□ 1.91
APTX-218ENST00000473270 KIF24Q5T7B8 1368 aa26.97■■□□□ 1.91
APTX-218ENST00000473270 DOT1LQ8TEK3 1739 aa26.97■■□□□ 1.91
APTX-218ENST00000473270 PPM1GO15355 546 aaPredicted RBP26.96■■□□□ 1.91
APTX-218ENST00000473270 HSP90AB2PQ58FF8 381 aa26.96■■□□□ 1.91
APTX-218ENST00000473270 ZNF784Q8NCA9 323 aaPredicted RBP26.96■■□□□ 1.91
APTX-218ENST00000473270 RGPD2P0DJD1 1756 aa26.92■■□□□ 1.9
APTX-218ENST00000473270 FLAD1Q8NFF5 587 aa26.92■■□□□ 1.9
APTX-218ENST00000473270 NSD2O96028 1365 aa26.92■■□□□ 1.9
APTX-218ENST00000473270 QSER1Q2KHR3 1735 aa26.91■■□□□ 1.9
APTX-218ENST00000473270 MPRIPQ6WCQ1 1025 aa26.91■■□□□ 1.9
APTX-218ENST00000473270 SMARCC1Q92922 1105 aaPredicted RBP26.91■■□□□ 1.9
APTX-218ENST00000473270 SPG7Q9UQ90 795 aa26.9■■□□□ 1.9
APTX-218ENST00000473270 KIF20BQ96Q89 1820 aa26.9■■□□□ 1.9
APTX-218ENST00000473270 NSD3Q9BZ95 1437 aa26.9■■□□□ 1.9
APTX-218ENST00000473270 POLR3GLQ9BT43 218 aa26.89■■□□□ 1.9
APTX-218ENST00000473270 LY75O60449 1722 aa26.87■■□□□ 1.89
APTX-218ENST00000473270 EMILIN1Q9Y6C2 1016 aa26.87■■□□□ 1.89
APTX-218ENST00000473270 PALLDQ8WX93 1383 aa26.85■■□□□ 1.89
APTX-218ENST00000473270 SHANK3Q9BYB0 1731 aa26.85■■□□□ 1.89
APTX-218ENST00000473270 CHD4Q14839 1912 aa26.85■■□□□ 1.89
APTX-218ENST00000473270 GRIN3BO60391 1043 aa26.85■■□□□ 1.89
APTX-218ENST00000473270 EIF4G2P78344 907 aaKnown RBP eCLIP26.85■■□□□ 1.89
APTX-218ENST00000473270 COL23A1Q86Y22 540 aaPredicted RBP26.85■■□□□ 1.89
APTX-218ENST00000473270 AK7Q96M32 723 aa26.85■■□□□ 1.89
APTX-218ENST00000473270 CARD14Q9BXL6 1004 aa26.84■■□□□ 1.89
APTX-218ENST00000473270 UTRNP46939 3433 aa26.83■■□□□ 1.88
APTX-218ENST00000473270 CYP27B1O15528 508 aa26.82■■□□□ 1.88
APTX-218ENST00000473270 MSL1Q68DK7 614 aa26.82■■□□□ 1.88
APTX-218ENST00000473270 NLGN2Q8NFZ4 835 aa26.8■■□□□ 1.88
APTX-218ENST00000473270 TMOD3Q9NYL9 352 aa26.79■■□□□ 1.88
APTX-218ENST00000473270 WASHC2AQ641Q2 1341 aa26.79■■□□□ 1.88
APTX-218ENST00000473270 TUBGCP6Q96RT7 1819 aa26.78■■□□□ 1.88
APTX-218ENST00000473270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.77■■□□□ 1.88
APTX-218ENST00000473270 HSPA5P11021 654 aaKnown RBP26.76■■□□□ 1.87
APTX-218ENST00000473270 C5P01031 1676 aa26.76■■□□□ 1.87
APTX-218ENST00000473270 GIGYF1O75420 1035 aaPredicted RBP26.75■■□□□ 1.87
APTX-218ENST00000473270 TNNT2P45379 298 aaPredicted RBP26.75■■□□□ 1.87
APTX-218ENST00000473270 IFNL2Q8IZJ0 200 aa26.75■■□□□ 1.87
APTX-218ENST00000473270 PIGBQ92521 554 aa26.75■■□□□ 1.87
APTX-218ENST00000473270 CD2APQ9Y5K6 639 aa26.75■■□□□ 1.87
APTX-218ENST00000473270 SENP3-EIF4A1A0A087X0R7 540 aa26.74■■□□□ 1.87
APTX-218ENST00000473270 PHF14O94880 888 aa26.74■■□□□ 1.87
APTX-218ENST00000473270 C1QTNF8P60827 252 aa26.74■■□□□ 1.87
APTX-218ENST00000473270 NKX1-1Q15270 411 aaPredicted RBP26.74■■□□□ 1.87
APTX-218ENST00000473270 EYA1Q99502 592 aa26.74■■□□□ 1.87
APTX-218ENST00000473270 COL24A1Q17RW2 1714 aa26.73■■□□□ 1.87
APTX-218ENST00000473270 LOC102724428A0A0B4J2F2 783 aa26.71■■□□□ 1.87
APTX-218ENST00000473270 SIK1P57059 783 aa26.71■■□□□ 1.87
APTX-218ENST00000473270 POLKQ9UBT6 870 aa26.71■■□□□ 1.87
APTX-218ENST00000473270 SSFA2P28290 1259 aa26.7■■□□□ 1.86
APTX-218ENST00000473270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.69■■□□□ 1.86
APTX-218ENST00000473270 PKD1L3Q7Z443 1732 aa26.69■■□□□ 1.86
APTX-218ENST00000473270 ATP6V1AP38606 617 aa26.68■■□□□ 1.86
APTX-218ENST00000473270 C4BP0C0L5 1744 aa26.68■■□□□ 1.86
APTX-218ENST00000473270 NCAPD2Q15021 1401 aa26.67■■□□□ 1.86
APTX-218ENST00000473270 HSP90AB1P08238 724 aaKnown RBP26.67■■□□□ 1.86
APTX-218ENST00000473270 PHKG2P15735 406 aa26.67■■□□□ 1.86
APTX-218ENST00000473270 YBX3P16989 372 aaKnown RBP eCLIP26.67■■□□□ 1.86
APTX-218ENST00000473270 MAP2P11137 1827 aaKnown RBP26.65■■□□□ 1.86
APTX-218ENST00000473270 ITGB4P16144 1822 aa26.65■■□□□ 1.86
APTX-218ENST00000473270 GNPATO15228 680 aa26.65■■□□□ 1.86
APTX-218ENST00000473270 EIF4A2Q14240 407 aaKnown RBP26.65■■□□□ 1.86
APTX-218ENST00000473270 PLEKHO1Q53GL0 409 aaPredicted RBP26.64■■□□□ 1.86
APTX-218ENST00000473270 ASAP1Q9ULH1 1129 aa26.64■■□□□ 1.86
APTX-218ENST00000473270 TAF1LQ8IZX4 1826 aa26.64■■□□□ 1.85
APTX-218ENST00000473270 PLEKHG2Q9H7P9 1386 aa26.63■■□□□ 1.85
APTX-218ENST00000473270 ANKRD26Q9UPS8 1709 aa26.63■■□□□ 1.85
APTX-218ENST00000473270 GOLGB1Q14789 3259 aaKnown RBP26.63■■□□□ 1.85
APTX-218ENST00000473270 TOGARAM1Q9Y4F4 1720 aa26.62■■□□□ 1.85
APTX-218ENST00000473270 LINC00116Q8NCU8 138 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms