RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 DDB1Q16531 1140 aa28.42■■■□□ 2.14
TRABD-206ENST00000472677 RSPH6AQ9H0K4 717 aa28.42■■■□□ 2.14
TRABD-206ENST00000472677 PRKAR2BP31323 418 aa28.42■■■□□ 2.14
TRABD-206ENST00000472677 PNNQ9H307 717 aaKnown RBP28.41■■■□□ 2.14
TRABD-206ENST00000472677 ZCRB1Q8TBF4 217 aaKnown RBP28.4■■■□□ 2.14
TRABD-206ENST00000472677 FAM9BQ8IZU0 186 aa28.39■■■□□ 2.14
TRABD-206ENST00000472677 OVOS2A0A0G2JMS6 1433 aa28.39■■■□□ 2.13
TRABD-206ENST00000472677 NEFMP07197 916 aa28.38■■■□□ 2.13
TRABD-206ENST00000472677 PDE3BQ13370 1112 aa28.38■■■□□ 2.13
TRABD-206ENST00000472677 SPG7Q9UQ90 795 aa28.38■■■□□ 2.13
TRABD-206ENST00000472677 PLEKHO1Q53GL0 409 aaPredicted RBP28.38■■■□□ 2.13
TRABD-206ENST00000472677 RGS12O14924 1447 aa28.37■■■□□ 2.13
TRABD-206ENST00000472677 AMOTQ4VCS5 1084 aa28.36■■■□□ 2.13
TRABD-206ENST00000472677 THSD7AQ9UPZ6 1657 aa28.36■■■□□ 2.13
TRABD-206ENST00000472677 DDX54Q8TDD1 881 aaKnown RBP28.35■■■□□ 2.13
TRABD-206ENST00000472677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.35■■■□□ 2.13
TRABD-206ENST00000472677 PARP4Q9UKK3 1724 aaKnown RBP28.35■■■□□ 2.13
TRABD-206ENST00000472677 WNK3Q9BYP7 1800 aa28.35■■■□□ 2.13
TRABD-206ENST00000472677 CCDC146Q8IYE0 955 aa28.34■■■□□ 2.13
TRABD-206ENST00000472677 PHACTR3Q96KR7 559 aa28.34■■■□□ 2.13
TRABD-206ENST00000472677 MAPK8IP3Q9UPT6 1336 aa28.33■■■□□ 2.13
TRABD-206ENST00000472677 TNS2Q63HR2 1409 aa28.33■■■□□ 2.13
TRABD-206ENST00000472677 KRT27Q7Z3Y8 459 aa28.32■■■□□ 2.12
TRABD-206ENST00000472677 PLEKHF1Q96S99 279 aa28.32■■■□□ 2.12
TRABD-206ENST00000472677 PLEKHG2Q9H7P9 1386 aa28.32■■■□□ 2.12
TRABD-206ENST00000472677 PCDH11XQ9BZA7 1347 aa28.32■■■□□ 2.12
TRABD-206ENST00000472677 PCDH11YQ9BZA8 1340 aa28.32■■■□□ 2.12
TRABD-206ENST00000472677 LRRC37A3O60309 1634 aa28.31■■■□□ 2.12
TRABD-206ENST00000472677 MTHFSDQ2M296 383 aaKnown RBP28.3■■■□□ 2.12
TRABD-206ENST00000472677 ZNF530Q6P9A1 599 aaPredicted RBP28.3■■■□□ 2.12
TRABD-206ENST00000472677 RUNDC1Q96C34 613 aa28.3■■■□□ 2.12
TRABD-206ENST00000472677 C1orf141Q5JVX7 400 aa28.28■■■□□ 2.12
TRABD-206ENST00000472677 MARCH10Q8NA82 808 aaPredicted RBP28.28■■■□□ 2.12
TRABD-206ENST00000472677 GAS2L2Q8NHY3 880 aa28.28■■■□□ 2.12
TRABD-206ENST00000472677 CYP27B1O15528 508 aa28.27■■■□□ 2.12
TRABD-206ENST00000472677 FAM182BQ5T319 152 aa28.27■■■□□ 2.12
TRABD-206ENST00000472677 IFNL2Q8IZJ0 200 aa28.27■■■□□ 2.12
TRABD-206ENST00000472677 PHKG2P15735 406 aa28.25■■■□□ 2.11
TRABD-206ENST00000472677 PKD1L3Q7Z443 1732 aa28.24■■■□□ 2.11
TRABD-206ENST00000472677 BRWD3Q6RI45 1802 aa28.23■■■□□ 2.11
TRABD-206ENST00000472677 AKAP4Q5JQC9 854 aa28.23■■■□□ 2.11
TRABD-206ENST00000472677 NFE2L2Q16236 605 aa28.21■■■□□ 2.11
TRABD-206ENST00000472677 APAF1O14727 1248 aa28.19■■■□□ 2.1
TRABD-206ENST00000472677 HSP90AB1P08238 724 aaKnown RBP28.19■■■□□ 2.1
TRABD-206ENST00000472677 NEUROD2Q15784 382 aa28.19■■■□□ 2.1
TRABD-206ENST00000472677 SHANK3Q9BYB0 1731 aa28.19■■■□□ 2.1
TRABD-206ENST00000472677 GNAT3A8MTJ3 354 aa28.19■■■□□ 2.1
TRABD-206ENST00000472677 FAM196AQ6ZSG2 479 aa28.19■■■□□ 2.1
TRABD-206ENST00000472677 RRP7AQ9Y3A4 280 aaKnown RBP28.19■■■□□ 2.1
TRABD-206ENST00000472677 TMPOP42166 694 aaKnown RBP28.18■■■□□ 2.1
TRABD-206ENST00000472677 MPRIPQ6WCQ1 1025 aa28.18■■■□□ 2.1
TRABD-206ENST00000472677 RIPK4P57078 832 aa28.17■■■□□ 2.1
TRABD-206ENST00000472677 NKX1-1Q15270 411 aaPredicted RBP28.17■■■□□ 2.1
TRABD-206ENST00000472677 DCAF5Q96JK2 942 aa28.17■■■□□ 2.1
TRABD-206ENST00000472677 MAP3K5Q99683 1374 aa28.17■■■□□ 2.1
TRABD-206ENST00000472677 SENP3-EIF4A1A0A087X0R7 540 aa28.16■■■□□ 2.1
TRABD-206ENST00000472677 RTF1Q92541 710 aaKnown RBP28.16■■■□□ 2.1
TRABD-206ENST00000472677 ILDR2Q71H61 639 aa28.14■■■□□ 2.1
TRABD-206ENST00000472677 ACSBG1Q96GR2 724 aa28.14■■■□□ 2.1
TRABD-206ENST00000472677 SYTL4Q96C24 671 aaPredicted RBP28.13■■■□□ 2.09
TRABD-206ENST00000472677 EP400Q96L91 3159 aa28.12■■■□□ 2.09
TRABD-206ENST00000472677 LGR6Q9HBX8 967 aa28.12■■■□□ 2.09
TRABD-206ENST00000472677 HTATSF1O43719 755 aaKnown RBP28.11■■■□□ 2.09
TRABD-206ENST00000472677 RNMTO43148 476 aaKnown RBP28.1■■■□□ 2.09
TRABD-206ENST00000472677 MCM10Q7L590 875 aa28.1■■■□□ 2.09
TRABD-206ENST00000472677 BCL9O00512 1426 aa28.1■■■□□ 2.09
TRABD-206ENST00000472677 PRIM1P49642 420 aaKnown RBP28.1■■■□□ 2.09
TRABD-206ENST00000472677 LMOD3Q0VAK6 560 aa28.1■■■□□ 2.09
TRABD-206ENST00000472677 DCTN1Q14203 1278 aa28.09■■■□□ 2.09
TRABD-206ENST00000472677 IL17REQ8NFR9 667 aa28.09■■■□□ 2.09
TRABD-206ENST00000472677 SALL2Q9Y467 1007 aaPredicted RBP28.09■■■□□ 2.09
TRABD-206ENST00000472677 KDM6AO15550 1401 aaPredicted RBP28.09■■■□□ 2.09
TRABD-206ENST00000472677 YTHDC1Q96MU7 727 aaKnown RBP28.08■■■□□ 2.09
TRABD-206ENST00000472677 ERVV-2B6SEH9 535 aa28.07■■■□□ 2.08
TRABD-206ENST00000472677 KCNQ2O43526 872 aa28.07■■■□□ 2.08
TRABD-206ENST00000472677 TRIM37O94972 964 aa28.07■■■□□ 2.08
TRABD-206ENST00000472677 CABP4P57796 275 aa28.07■■■□□ 2.08
TRABD-206ENST00000472677 TEFQ10587 303 aa28.05■■■□□ 2.08
TRABD-206ENST00000472677 TMOD3Q9NYL9 352 aa28.05■■■□□ 2.08
TRABD-206ENST00000472677 TRIM35Q9UPQ4 493 aa28.05■■■□□ 2.08
TRABD-206ENST00000472677 NFATC2IPQ8NCF5 419 aa28.03■■■□□ 2.08
TRABD-206ENST00000472677 THUMPD2Q9BTF0 503 aaKnown RBP28.03■■■□□ 2.08
TRABD-206ENST00000472677 BCL11BQ9C0K0 894 aaPredicted RBP28.03■■■□□ 2.08
TRABD-206ENST00000472677 SLC52A2Q9HAB3 445 aa28.03■■■□□ 2.08
TRABD-206ENST00000472677 KAT6BQ8WYB5 2073 aa28.03■■■□□ 2.08
TRABD-206ENST00000472677 PTF1AQ7RTS3 328 aa28.02■■■□□ 2.08
TRABD-206ENST00000472677 DLG5Q8TDM6 1919 aa28.02■■■□□ 2.08
TRABD-206ENST00000472677 CEMIPQ8WUJ3 1361 aa28.01■■■□□ 2.08
TRABD-206ENST00000472677 DOT1LQ8TEK3 1739 aa28.01■■■□□ 2.07
TRABD-206ENST00000472677 PIGBQ92521 554 aa28■■■□□ 2.07
TRABD-206ENST00000472677 NGEFQ8N5V2 710 aa28■■■□□ 2.07
TRABD-206ENST00000472677 TOGARAM1Q9Y4F4 1720 aa27.99■■■□□ 2.07
TRABD-206ENST00000472677 CCDC27Q2M243 656 aa27.99■■■□□ 2.07
TRABD-206ENST00000472677 NCBP3Q53F19 620 aaKnown RBP27.99■■■□□ 2.07
TRABD-206ENST00000472677 SCN11AQ9UI33 1791 aa27.98■■■□□ 2.07
TRABD-206ENST00000472677 WWC1Q8IX03 1113 aa27.98■■■□□ 2.07
TRABD-206ENST00000472677 HNRNPUQ00839 825 aaKnown RBP eCLIP27.97■■■□□ 2.07
TRABD-206ENST00000472677 SF3B2Q13435 895 aaKnown RBP27.97■■■□□ 2.07
TRABD-206ENST00000472677 ADAMTS7Q9UKP4 1686 aa27.96■■■□□ 2.07
TRABD-206ENST00000472677 TAF7Q15545 349 aaPredicted RBP27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms