RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 DCAF8L1A6NGE4 600 aa19.41■□□□□ 0.7
RTKN-207ENST00000472518 HMGB2P26583 209 aaKnown RBP19.41■□□□□ 0.7
RTKN-207ENST00000472518 NSD3Q9BZ95 1437 aa19.41■□□□□ 0.7
RTKN-207ENST00000472518 SHANK3Q9BYB0 1731 aa19.4■□□□□ 0.7
RTKN-207ENST00000472518 RRS1Q15050 365 aaKnown RBP19.4■□□□□ 0.7
RTKN-207ENST00000472518 SLC27A3Q5K4L6 730 aa19.4■□□□□ 0.7
RTKN-207ENST00000472518 ZCRB1Q8TBF4 217 aaKnown RBP19.4■□□□□ 0.7
RTKN-207ENST00000472518 PCGF6Q9BYE7 350 aa19.4■□□□□ 0.7
RTKN-207ENST00000472518 DDX54Q8TDD1 881 aaKnown RBP19.39■□□□□ 0.69
RTKN-207ENST00000472518 RAPGEF4Q8WZA2 1011 aa19.39■□□□□ 0.69
RTKN-207ENST00000472518 SYT17Q9BSW7 474 aa19.39■□□□□ 0.69
RTKN-207ENST00000472518 MEGF6O75095 1541 aa19.39■□□□□ 0.69
RTKN-207ENST00000472518 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.69
RTKN-207ENST00000472518 QSER1Q2KHR3 1735 aa19.38■□□□□ 0.69
RTKN-207ENST00000472518 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
RTKN-207ENST00000472518 MTFR1LQ9H019 292 aa19.37■□□□□ 0.69
RTKN-207ENST00000472518 TATP17735 454 aaPredicted RBP19.36■□□□□ 0.69
RTKN-207ENST00000472518 NBPF6Q5VWK0 638 aa19.36■□□□□ 0.69
RTKN-207ENST00000472518 NBPF4Q96M43 638 aa19.36■□□□□ 0.69
RTKN-207ENST00000472518 FBLN1P23142 703 aa19.35■□□□□ 0.69
RTKN-207ENST00000472518 EIF4G2P78344 907 aaKnown RBP eCLIP19.35■□□□□ 0.69
RTKN-207ENST00000472518 CARD14Q9BXL6 1004 aa19.35■□□□□ 0.69
RTKN-207ENST00000472518 LY75O60449 1722 aa19.34■□□□□ 0.69
RTKN-207ENST00000472518 PCDH11XQ9BZA7 1347 aa19.34■□□□□ 0.69
RTKN-207ENST00000472518 PCDH11YQ9BZA8 1340 aa19.34■□□□□ 0.69
RTKN-207ENST00000472518 PLEKHG2Q9H7P9 1386 aa19.33■□□□□ 0.69
RTKN-207ENST00000472518 MAP2P11137 1827 aaKnown RBP19.33■□□□□ 0.69
RTKN-207ENST00000472518 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
RTKN-207ENST00000472518 HSP90AB2PQ58FF8 381 aa19.33■□□□□ 0.68
RTKN-207ENST00000472518 CHD4Q14839 1912 aa19.33■□□□□ 0.68
RTKN-207ENST00000472518 NCAPD2Q15021 1401 aa19.33■□□□□ 0.68
RTKN-207ENST00000472518 NSD2O96028 1365 aa19.32■□□□□ 0.68
RTKN-207ENST00000472518 SLC16A10Q8TF71 515 aa19.32■□□□□ 0.68
RTKN-207ENST00000472518 SYTL4Q96C24 671 aaPredicted RBP19.32■□□□□ 0.68
RTKN-207ENST00000472518 PKD1L3Q7Z443 1732 aa19.31■□□□□ 0.68
RTKN-207ENST00000472518 PRIM1P49642 420 aaKnown RBP19.31■□□□□ 0.68
RTKN-207ENST00000472518 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
RTKN-207ENST00000472518 CCER1Q8TC90 406 aaPredicted RBP19.3■□□□□ 0.68
RTKN-207ENST00000472518 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
RTKN-207ENST00000472518 SENP3-EIF4A1A0A087X0R7 540 aa19.29■□□□□ 0.68
RTKN-207ENST00000472518 AKT1S1Q96B36 256 aa19.29■□□□□ 0.68
RTKN-207ENST00000472518 LRRC4BQ9NT99 713 aa19.29■□□□□ 0.68
RTKN-207ENST00000472518 C1QTNF8P60827 252 aa19.28■□□□□ 0.68
RTKN-207ENST00000472518 USHBP1Q8N6Y0 703 aa19.28■□□□□ 0.68
RTKN-207ENST00000472518 ARXQ96QS3 562 aa19.28■□□□□ 0.68
RTKN-207ENST00000472518 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
RTKN-207ENST00000472518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.27■□□□□ 0.68
RTKN-207ENST00000472518 COL24A1Q17RW2 1714 aa19.26■□□□□ 0.67
RTKN-207ENST00000472518 HSPA5P11021 654 aaKnown RBP19.25■□□□□ 0.67
RTKN-207ENST00000472518 CCNL1Q9UK58 526 aaPredicted RBP19.25■□□□□ 0.67
RTKN-207ENST00000472518 SPG7Q9UQ90 795 aa19.25■□□□□ 0.67
RTKN-207ENST00000472518 TUBGCP6Q96RT7 1819 aa19.24■□□□□ 0.67
RTKN-207ENST00000472518 PPM1GO15355 546 aaPredicted RBP19.24■□□□□ 0.67
RTKN-207ENST00000472518 POLD1P28340 1107 aa19.23■□□□□ 0.67
RTKN-207ENST00000472518 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
RTKN-207ENST00000472518 POLR3GLQ9BT43 218 aa19.23■□□□□ 0.67
RTKN-207ENST00000472518 TFCP2L1Q9NZI6 479 aa19.23■□□□□ 0.67
RTKN-207ENST00000472518 POLKQ9UBT6 870 aa19.23■□□□□ 0.67
RTKN-207ENST00000472518 ITGB4P16144 1822 aa19.23■□□□□ 0.67
RTKN-207ENST00000472518 NKX1-1Q15270 411 aaPredicted RBP19.22■□□□□ 0.67
RTKN-207ENST00000472518 PNPLA7Q6ZV29 1317 aa19.22■□□□□ 0.67
RTKN-207ENST00000472518 C5P01031 1676 aa19.21■□□□□ 0.67
RTKN-207ENST00000472518 CYP27B1O15528 508 aa19.21■□□□□ 0.67
RTKN-207ENST00000472518 FLAD1Q8NFF5 587 aa19.2■□□□□ 0.66
RTKN-207ENST00000472518 EYA1Q99502 592 aa19.2■□□□□ 0.66
RTKN-207ENST00000472518 TAF1LQ8IZX4 1826 aa19.2■□□□□ 0.66
RTKN-207ENST00000472518 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
RTKN-207ENST00000472518 PALLDQ8WX93 1383 aa19.19■□□□□ 0.66
RTKN-207ENST00000472518 KCNQ4P56696 695 aa19.19■□□□□ 0.66
RTKN-207ENST00000472518 NLGN2Q8NFZ4 835 aa19.19■□□□□ 0.66
RTKN-207ENST00000472518 PANK3Q9H999 370 aa19.19■□□□□ 0.66
RTKN-207ENST00000472518 GPR162Q16538 588 aa19.17■□□□□ 0.66
RTKN-207ENST00000472518 MPRIPQ6WCQ1 1025 aa19.17■□□□□ 0.66
RTKN-207ENST00000472518 IFNL2Q8IZJ0 200 aa19.17■□□□□ 0.66
RTKN-207ENST00000472518 EIF4A2Q14240 407 aaKnown RBP19.16■□□□□ 0.66
RTKN-207ENST00000472518 IGSF1Q8N6C5 1336 aa19.16■□□□□ 0.66
RTKN-207ENST00000472518 KLHL34Q8N239 644 aa19.15■□□□□ 0.66
RTKN-207ENST00000472518 KNSTRNQ9Y448 316 aa19.15■□□□□ 0.66
RTKN-207ENST00000472518 HSP90AB1P08238 724 aaKnown RBP19.14■□□□□ 0.65
RTKN-207ENST00000472518 PHKG2P15735 406 aa19.13■□□□□ 0.65
RTKN-207ENST00000472518 YBX3P16989 372 aaKnown RBP eCLIP19.13■□□□□ 0.65
RTKN-207ENST00000472518 MORC1Q86VD1 984 aa19.13■□□□□ 0.65
RTKN-207ENST00000472518 TMOD3Q9NYL9 352 aa19.13■□□□□ 0.65
RTKN-207ENST00000472518 C4BP0C0L5 1744 aa19.13■□□□□ 0.65
RTKN-207ENST00000472518 GIGYF1O75420 1035 aaPredicted RBP19.12■□□□□ 0.65
RTKN-207ENST00000472518 TNNT2P45379 298 aaPredicted RBP19.12■□□□□ 0.65
RTKN-207ENST00000472518 AMOTQ4VCS5 1084 aa19.12■□□□□ 0.65
RTKN-207ENST00000472518 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
RTKN-207ENST00000472518 PIGBQ92521 554 aa19.12■□□□□ 0.65
RTKN-207ENST00000472518 PLEKHO1Q53GL0 409 aaPredicted RBP19.1■□□□□ 0.65
RTKN-207ENST00000472518 COL23A1Q86Y22 540 aaPredicted RBP19.1■□□□□ 0.65
RTKN-207ENST00000472518 AK7Q96M32 723 aa19.1■□□□□ 0.65
RTKN-207ENST00000472518 ZNF831Q5JPB2 1677 aa19.1■□□□□ 0.65
RTKN-207ENST00000472518 UBR3Q6ZT12 1888 aa19.09■□□□□ 0.65
RTKN-207ENST00000472518 MSH5O43196 834 aa19.09■□□□□ 0.65
RTKN-207ENST00000472518 IFFO2Q5TF58 517 aa19.09■□□□□ 0.65
RTKN-207ENST00000472518 LOC102724428A0A0B4J2F2 783 aa19.08■□□□□ 0.64
RTKN-207ENST00000472518 ERVV-2B6SEH9 535 aa19.08■□□□□ 0.64
RTKN-207ENST00000472518 SIK1P57059 783 aa19.08■□□□□ 0.64
RTKN-207ENST00000472518 DCAF5Q96JK2 942 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms