RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 GOLIM4O00461 696 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 IRX3P78415 501 aaPredicted RBP4.14□□□□□ -1.75
TTC3-214ENST00000472398 FAM161AQ3B820 660 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 PLEKHG6Q3KR16 790 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 VARS2Q5ST30 1063 aaKnown RBP4.14□□□□□ -1.75
TTC3-214ENST00000472398 C9orf131Q5VYM1 1079 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 NOP9Q86U38 636 aaKnown RBP4.14□□□□□ -1.75
TTC3-214ENST00000472398 PACS2Q86VP3 889 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 ZNF513Q8N8E2 541 aaPredicted RBP4.14□□□□□ -1.75
TTC3-214ENST00000472398 DHX38Q92620 1227 aaKnown RBP4.14□□□□□ -1.75
TTC3-214ENST00000472398 TATDN2Q93075 761 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 KCNK17Q96T54 332 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 QTRT2Q9H974 415 aaKnown RBP4.14□□□□□ -1.75
TTC3-214ENST00000472398 PUF60Q9UHX1 559 aaKnown RBP4.14□□□□□ -1.75
TTC3-214ENST00000472398 WWC3Q9ULE0 1092 aa4.14□□□□□ -1.75
TTC3-214ENST00000472398 RRP9O43818 475 aaKnown RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 SSTR3P32745 418 aaPredicted RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 BIRC2Q13490 618 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 HSP90AB2PQ58FF8 381 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 CFAP70Q5T0N1 1121 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 MSL3Q8N5Y2 521 aaKnown RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 CEP120Q8N960 986 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 ENOX1Q8TC92 643 aaKnown RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 KCNH8Q96L42 1107 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 INO80BQ9C086 356 aaPredicted RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 TMEM51Q9NW97 253 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 GNEQ9Y223 722 aaKnown RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 RCCD1A6NED2 376 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 TK2O00142 265 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 CT47B1P0C2W7 299 aaPredicted RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 DNAJB2P25686 324 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 NBPF9Q3BBW0 867 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 SH3D19Q5HYK7 790 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 JAZF1Q86VZ6 243 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 C1orf131Q8NDD1 294 aaKnown RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 PNISRQ8TF01 805 aaKnown RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 YTHDC1Q96MU7 727 aaKnown RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 TMEM134Q9H6X4 195 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 SNRKQ9NRH2 765 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 HCSTQ9UBK5 93 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 RABGEF1Q9UJ41 708 aa4.13□□□□□ -1.75
TTC3-214ENST00000472398 NOP58Q9Y2X3 529 aaKnown RBP4.13□□□□□ -1.75
TTC3-214ENST00000472398 NRDCO43847 1150 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 CSB-PGBD3P0DP91 1061 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 COPB2P35606 906 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 HDAC1Q13547 482 aaPredicted RBP4.12□□□□□ -1.75
TTC3-214ENST00000472398 ICE2Q659A1 982 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 ADAMTS19Q8TE59 1207 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 MKL1Q969V6 931 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 SCYL1Q96KG9 808 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 VRTNQ9H8Y1 702 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 DMGDHQ9UI17 866 aaKnown RBP4.12□□□□□ -1.75
TTC3-214ENST00000472398 POTEB3A0JP26 581 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 FAM163BP0C2L3 166 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 PSEN2P49810 448 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 PROX2Q3B8N5 592 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 POTEBQ6S5H4 581 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 NUDT18Q6ZVK8 323 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 ANKRD23Q86SG2 305 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 LAPTM4BQ86VI4 370 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 PROCA1Q8NCQ7 364 aaPredicted RBP4.12□□□□□ -1.75
TTC3-214ENST00000472398 IL17RAQ96F46 866 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 JADE2Q9NQC1 790 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 SWAP70Q9UH65 585 aa4.12□□□□□ -1.75
TTC3-214ENST00000472398 BHMG1C9JSJ3 638 aaPredicted RBP4.11□□□□□ -1.75
TTC3-214ENST00000472398 TGFB3P10600 412 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 CD46P15529 392 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 SETDB1Q15047 1291 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 DMRTA1Q5VZB9 504 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 FBXO31Q5XUX0 539 aaPredicted RBP4.11□□□□□ -1.75
TTC3-214ENST00000472398 FMNL3Q8IVF7 1028 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 CCER1Q8TC90 406 aaPredicted RBP4.11□□□□□ -1.75
TTC3-214ENST00000472398 PCMTD1Q96MG8 357 aaPredicted RBP4.11□□□□□ -1.75
TTC3-214ENST00000472398 GDPD2Q9HCC8 539 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 IQSEC3Q9UPP2 1182 aaPredicted RBP4.11□□□□□ -1.75
TTC3-214ENST00000472398 VPS9D1Q9Y2B5 631 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 ZRANB2O95218 330 aaKnown RBP eCLIP4.11□□□□□ -1.75
TTC3-214ENST00000472398 ERCC5P28715 1186 aaPredicted RBP4.11□□□□□ -1.75
TTC3-214ENST00000472398 NEXNQ0ZGT2 675 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 MTA1Q13330 715 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 NEUROD1Q13562 356 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 TUSC1Q2TAM9 212 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 MAP9Q49MG5 647 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 CC2D1BQ5T0F9 858 aaKnown RBP4.11□□□□□ -1.75
TTC3-214ENST00000472398 LSRQ86X29 649 aaPredicted RBP4.11□□□□□ -1.75
TTC3-214ENST00000472398 BORCS6Q96GS4 357 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 HS3ST6Q96QI5 342 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 TANGO6Q9C0B7 1094 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 LRRC27Q9C0I9 530 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 KIAA1468Q9P260 1216 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 PNMA3Q9UL41 463 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 COL4A3BPQ9Y5P4 624 aa4.11□□□□□ -1.75
TTC3-214ENST00000472398 GJA5P36382 358 aa4.1□□□□□ -1.75
TTC3-214ENST00000472398 TDO2P48775 406 aa4.1□□□□□ -1.75
TTC3-214ENST00000472398 BMS1Q14692 1282 aaKnown RBP4.1□□□□□ -1.75
TTC3-214ENST00000472398 TSNAXIP1Q2TAA8 658 aa4.1□□□□□ -1.75
TTC3-214ENST00000472398 SULF1Q8IWU6 871 aa4.1□□□□□ -1.75
TTC3-214ENST00000472398 MARVELD3Q96A59 401 aa4.1□□□□□ -1.75
TTC3-214ENST00000472398 SLC39A13Q96H72 371 aa4.1□□□□□ -1.75
TTC3-214ENST00000472398 NEUROD6Q96NK8 337 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms