RNA–Protein interactions for RNA: ENST00000472211.2

SPTAN1-205, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-205ENST00000472211 ZNF526Q8TF50 670 aaPredicted RBP18.57■□□□□ 0.56
SPTAN1-205ENST00000472211 UBR3Q6ZT12 1888 aa18.56■□□□□ 0.56
SPTAN1-205ENST00000472211 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
SPTAN1-205ENST00000472211 CICQ96RK0 1608 aaPredicted RBP18.54■□□□□ 0.56
SPTAN1-205ENST00000472211 KIF3CO14782 793 aa18.54■□□□□ 0.56
SPTAN1-205ENST00000472211 MSL1Q68DK7 614 aa18.54■□□□□ 0.56
SPTAN1-205ENST00000472211 DDX54Q8TDD1 881 aaKnown RBP18.54■□□□□ 0.56
SPTAN1-205ENST00000472211 WDR90Q96KV7 1748 aa18.54■□□□□ 0.56
SPTAN1-205ENST00000472211 SBNO2Q9Y2G9 1366 aa18.54■□□□□ 0.56
SPTAN1-205ENST00000472211 NME9Q86XW9 330 aa18.53■□□□□ 0.56
SPTAN1-205ENST00000472211 KIAA1551Q9HCM1 1747 aa18.53■□□□□ 0.56
SPTAN1-205ENST00000472211 CD2APQ9Y5K6 639 aa18.53■□□□□ 0.56
SPTAN1-205ENST00000472211 DNAJC5GQ8N7S2 189 aa18.52■□□□□ 0.56
SPTAN1-205ENST00000472211 ITGB4P16144 1822 aa18.51■□□□□ 0.55
SPTAN1-205ENST00000472211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.55
SPTAN1-205ENST00000472211 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
SPTAN1-205ENST00000472211 CCNL1Q9UK58 526 aaPredicted RBP18.51■□□□□ 0.55
SPTAN1-205ENST00000472211 C4BP0C0L5 1744 aa18.51■□□□□ 0.55
SPTAN1-205ENST00000472211 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
SPTAN1-205ENST00000472211 MEGF6O75095 1541 aa18.49■□□□□ 0.55
SPTAN1-205ENST00000472211 MSH5O43196 834 aa18.49■□□□□ 0.55
SPTAN1-205ENST00000472211 PCNTO95613 3336 aa18.48■□□□□ 0.55
SPTAN1-205ENST00000472211 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
SPTAN1-205ENST00000472211 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
SPTAN1-205ENST00000472211 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.55
SPTAN1-205ENST00000472211 BRCA1P38398 1863 aaKnown RBP18.46■□□□□ 0.54
SPTAN1-205ENST00000472211 APLP1P51693 650 aa18.45■□□□□ 0.54
SPTAN1-205ENST00000472211 IP6K1Q92551 441 aa18.45■□□□□ 0.54
SPTAN1-205ENST00000472211 IGSF1Q8N6C5 1336 aa18.45■□□□□ 0.54
SPTAN1-205ENST00000472211 USP47Q96K76 1375 aa18.44■□□□□ 0.54
SPTAN1-205ENST00000472211 WWC3Q9ULE0 1092 aa18.44■□□□□ 0.54
SPTAN1-205ENST00000472211 EDC4Q6P2E9 1401 aaKnown RBP18.43■□□□□ 0.54
SPTAN1-205ENST00000472211 LTV1Q96GA3 475 aaPredicted RBP18.42■□□□□ 0.54
SPTAN1-205ENST00000472211 ZCRB1Q8TBF4 217 aaKnown RBP18.41■□□□□ 0.54
SPTAN1-205ENST00000472211 COL13A1Q5TAT6 717 aaPredicted RBP18.4■□□□□ 0.54
SPTAN1-205ENST00000472211 L3MBTL2Q969R5 705 aa18.4■□□□□ 0.54
SPTAN1-205ENST00000472211 SMIM5Q71RC9 77 aa18.39■□□□□ 0.53
SPTAN1-205ENST00000472211 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
SPTAN1-205ENST00000472211 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
SPTAN1-205ENST00000472211 TOMM70O94826 608 aa18.38■□□□□ 0.53
SPTAN1-205ENST00000472211 ROCK2O75116 1388 aaKnown RBP18.38■□□□□ 0.53
SPTAN1-205ENST00000472211 HOXC9P31274 260 aa18.37■□□□□ 0.53
SPTAN1-205ENST00000472211 FLAD1Q8NFF5 587 aa18.37■□□□□ 0.53
SPTAN1-205ENST00000472211 SLC12A5Q9H2X9 1139 aa18.37■□□□□ 0.53
SPTAN1-205ENST00000472211 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
SPTAN1-205ENST00000472211 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
SPTAN1-205ENST00000472211 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
SPTAN1-205ENST00000472211 FBLN1P23142 703 aa18.36■□□□□ 0.53
SPTAN1-205ENST00000472211 PXDNLA1KZ92 1463 aa18.35■□□□□ 0.53
SPTAN1-205ENST00000472211 JMYQ8N9B5 988 aa18.34■□□□□ 0.53
SPTAN1-205ENST00000472211 NMRK2Q9NPI5 230 aa18.34■□□□□ 0.53
SPTAN1-205ENST00000472211 SBF1O95248 1867 aa18.34■□□□□ 0.53
SPTAN1-205ENST00000472211 HTRA3P83110 453 aa18.33■□□□□ 0.52
SPTAN1-205ENST00000472211 NBPF6Q5VWK0 638 aa18.33■□□□□ 0.52
SPTAN1-205ENST00000472211 NBPF4Q96M43 638 aa18.33■□□□□ 0.52
SPTAN1-205ENST00000472211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.32■□□□□ 0.52
SPTAN1-205ENST00000472211 HDGFL2Q7Z4V5 671 aaPredicted RBP18.32■□□□□ 0.52
SPTAN1-205ENST00000472211 KLRG1Q96E93 195 aa18.32■□□□□ 0.52
SPTAN1-205ENST00000472211 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
SPTAN1-205ENST00000472211 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
SPTAN1-205ENST00000472211 CAPN15O75808 1086 aa18.3■□□□□ 0.52
SPTAN1-205ENST00000472211 PHF14O94880 888 aa18.3■□□□□ 0.52
SPTAN1-205ENST00000472211 USHBP1Q8N6Y0 703 aa18.3■□□□□ 0.52
SPTAN1-205ENST00000472211 TNRC6CQ9HCJ0 1690 aaKnown RBP18.29■□□□□ 0.52
SPTAN1-205ENST00000472211 AK7Q96M32 723 aa18.29■□□□□ 0.52
SPTAN1-205ENST00000472211 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
SPTAN1-205ENST00000472211 NSD3Q9BZ95 1437 aa18.28■□□□□ 0.52
SPTAN1-205ENST00000472211 RTL1A6NKG5 1358 aa18.28■□□□□ 0.52
SPTAN1-205ENST00000472211 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
SPTAN1-205ENST00000472211 CYP27B1O15528 508 aa18.27■□□□□ 0.52
SPTAN1-205ENST00000472211 PRELPP51888 382 aa18.27■□□□□ 0.52
SPTAN1-205ENST00000472211 LINC00116Q8NCU8 138 aa18.27■□□□□ 0.52
SPTAN1-205ENST00000472211 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.52
SPTAN1-205ENST00000472211 COL5A3P25940 1745 aaPredicted RBP18.26■□□□□ 0.51
SPTAN1-205ENST00000472211 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
SPTAN1-205ENST00000472211 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
SPTAN1-205ENST00000472211 SSFA2P28290 1259 aa18.26■□□□□ 0.51
SPTAN1-205ENST00000472211 AMPHP49418 695 aa18.26■□□□□ 0.51
SPTAN1-205ENST00000472211 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
SPTAN1-205ENST00000472211 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
SPTAN1-205ENST00000472211 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
SPTAN1-205ENST00000472211 KIF20BQ96Q89 1820 aa18.25■□□□□ 0.51
SPTAN1-205ENST00000472211 ZNF831Q5JPB2 1677 aa18.25■□□□□ 0.51
SPTAN1-205ENST00000472211 TNS4Q8IZW8 715 aa18.24■□□□□ 0.51
SPTAN1-205ENST00000472211 PIGBQ92521 554 aa18.24■□□□□ 0.51
SPTAN1-205ENST00000472211 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
SPTAN1-205ENST00000472211 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
SPTAN1-205ENST00000472211 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
SPTAN1-205ENST00000472211 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
SPTAN1-205ENST00000472211 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
SPTAN1-205ENST00000472211 SMARCC1Q92922 1105 aaPredicted RBP18.23■□□□□ 0.51
SPTAN1-205ENST00000472211 COG3Q96JB2 828 aa18.23■□□□□ 0.51
SPTAN1-205ENST00000472211 BCS1LQ9Y276 419 aa18.23■□□□□ 0.51
SPTAN1-205ENST00000472211 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
SPTAN1-205ENST00000472211 MMP10P09238 476 aa18.22■□□□□ 0.51
SPTAN1-205ENST00000472211 ITPK1Q13572 414 aa18.22■□□□□ 0.51
SPTAN1-205ENST00000472211 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.51
SPTAN1-205ENST00000472211 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
SPTAN1-205ENST00000472211 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
SPTAN1-205ENST00000472211 SIK1P57059 783 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms