RNA–Protein interactions for RNA: ENST00000471929.1

CERK-204, Transcript of ceramide kinase, human

TSL 4

Gene CERK, Length 567 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERK-204	ENST00000471929	ANKRD26	Q9UPS8	1709 aa		13.82	□□□□□ -0.2
CERK-204	ENST00000471929	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.82	□□□□□ -0.2
CERK-204	ENST00000471929	ACSBG1	Q96GR2	724 aa		13.82	□□□□□ -0.2
CERK-204	ENST00000471929	STK32B	Q9NY57	414 aa		13.82	□□□□□ -0.2
CERK-204	ENST00000471929	PEAK1	Q9H792	1746 aa		13.81	□□□□□ -0.2
CERK-204	ENST00000471929	HSP90AB1	P08238	724 aa	Known RBP	13.81	□□□□□ -0.2
CERK-204	ENST00000471929	ZEB1	P37275	1124 aa	Predicted RBP	13.81	□□□□□ -0.2
CERK-204	ENST00000471929	EIF4A2	Q14240	407 aa	Known RBP	13.81	□□□□□ -0.2
CERK-204	ENST00000471929	R3HDM1	Q15032	1099 aa	Known RBP	13.81	□□□□□ -0.2
CERK-204	ENST00000471929	EYA1	Q99502	592 aa		13.81	□□□□□ -0.2
CERK-204	ENST00000471929	MEGF6	O75095	1541 aa		13.8	□□□□□ -0.2
CERK-204	ENST00000471929	TXNRD1	Q16881	649 aa		13.8	□□□□□ -0.2
CERK-204	ENST00000471929	AMOT	Q4VCS5	1084 aa		13.8	□□□□□ -0.2
CERK-204	ENST00000471929	SLC27A3	Q5K4L6	730 aa		13.8	□□□□□ -0.2
CERK-204	ENST00000471929	CFAP53	Q96M91	514 aa		13.8	□□□□□ -0.2
CERK-204	ENST00000471929	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.79	□□□□□ -0.2
CERK-204	ENST00000471929	RGPD4	Q7Z3J3	1758 aa		13.79	□□□□□ -0.2
CERK-204	ENST00000471929	PSD	A5PKW4	1024 aa	Predicted RBP	13.79	□□□□□ -0.2
CERK-204	ENST00000471929	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.79	□□□□□ -0.2
CERK-204	ENST00000471929	CC2D1B	Q5T0F9	858 aa	Known RBP	13.79	□□□□□ -0.2
CERK-204	ENST00000471929	IFNL2	Q8IZJ0	200 aa		13.78	□□□□□ -0.2
CERK-204	ENST00000471929	SMARCC1	Q92922	1105 aa	Predicted RBP	13.78	□□□□□ -0.2
CERK-204	ENST00000471929	IGSF1	Q8N6C5	1336 aa		13.78	□□□□□ -0.2
CERK-204	ENST00000471929	NCAPD2	Q15021	1401 aa		13.78	□□□□□ -0.2
CERK-204	ENST00000471929	KCNQ2	O43526	872 aa		13.77	□□□□□ -0.21
CERK-204	ENST00000471929	PRIM1	P49642	420 aa	Known RBP	13.77	□□□□□ -0.21
CERK-204	ENST00000471929	C1orf141	Q5JVX7	400 aa		13.77	□□□□□ -0.21
CERK-204	ENST00000471929	NHS	Q6T4R5	1651 aa		13.77	□□□□□ -0.21
CERK-204	ENST00000471929	PER1	O15534	1290 aa	Predicted RBP	13.76	□□□□□ -0.21
CERK-204	ENST00000471929	DIAPH1	O60610	1272 aa	Known RBP	13.75	□□□□□ -0.21
CERK-204	ENST00000471929	MTHFS	P49914	203 aa		13.75	□□□□□ -0.21
CERK-204	ENST00000471929	NUDC	Q9Y266	331 aa		13.75	□□□□□ -0.21
CERK-204	ENST00000471929	MAP2	P11137	1827 aa	Known RBP	13.74	□□□□□ -0.21
CERK-204	ENST00000471929	YY1	P25490	414 aa		13.74	□□□□□ -0.21
CERK-204	ENST00000471929	NKX1-1	Q15270	411 aa	Predicted RBP	13.74	□□□□□ -0.21
CERK-204	ENST00000471929	SPON1	Q9HCB6	807 aa		13.74	□□□□□ -0.21
CERK-204	ENST00000471929	TMOD3	Q9NYL9	352 aa		13.74	□□□□□ -0.21
CERK-204	ENST00000471929	RREB1	Q92766	1687 aa		13.74	□□□□□ -0.21
CERK-204	ENST00000471929	KAT6B	Q8WYB5	2073 aa		13.74	□□□□□ -0.21
CERK-204	ENST00000471929	SLC15A2	Q16348	729 aa		13.73	□□□□□ -0.21
CERK-204	ENST00000471929	SULT6B1	Q6IMI4	303 aa		13.73	□□□□□ -0.21
CERK-204	ENST00000471929	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.73	□□□□□ -0.21
CERK-204	ENST00000471929	CCNL1	Q9UK58	526 aa	Predicted RBP	13.73	□□□□□ -0.21
CERK-204	ENST00000471929	SBF2	Q86WG5	1849 aa		13.73	□□□□□ -0.21
CERK-204	ENST00000471929	CYP27B1	O15528	508 aa		13.72	□□□□□ -0.21
CERK-204	ENST00000471929	PHKG2	P15735	406 aa		13.72	□□□□□ -0.21
CERK-204	ENST00000471929	IL13	P35225	146 aa		13.72	□□□□□ -0.21
CERK-204	ENST00000471929	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.72	□□□□□ -0.21
CERK-204	ENST00000471929	MPRIP	Q6WCQ1	1025 aa		13.72	□□□□□ -0.21
CERK-204	ENST00000471929	DCAF5	Q96JK2	942 aa		13.72	□□□□□ -0.21
CERK-204	ENST00000471929	DCAF8L1	A6NGE4	600 aa		13.71	□□□□□ -0.21
CERK-204	ENST00000471929	CNGB1	Q14028	1251 aa	Predicted RBP	13.71	□□□□□ -0.21
CERK-204	ENST00000471929	PTF1A	Q7RTS3	328 aa		13.71	□□□□□ -0.21
CERK-204	ENST00000471929	NUP188	Q5SRE5	1749 aa		13.7	□□□□□ -0.22
CERK-204	ENST00000471929	ERVV-2	B6SEH9	535 aa		13.7	□□□□□ -0.22
CERK-204	ENST00000471929	NEFM	P07197	916 aa		13.7	□□□□□ -0.22
CERK-204	ENST00000471929	IFFO2	Q5TF58	517 aa		13.7	□□□□□ -0.22
CERK-204	ENST00000471929	KDR	P35968	1356 aa		13.7	□□□□□ -0.22
CERK-204	ENST00000471929	PALLD	Q8WX93	1383 aa		13.7	□□□□□ -0.22
CERK-204	ENST00000471929	PROM2	Q8N271	834 aa		13.69	□□□□□ -0.22
CERK-204	ENST00000471929	FLAD1	Q8NFF5	587 aa		13.69	□□□□□ -0.22
CERK-204	ENST00000471929	TFCP2L1	Q9NZI6	479 aa		13.69	□□□□□ -0.22
CERK-204	ENST00000471929	RGPD2	P0DJD1	1756 aa		13.68	□□□□□ -0.22
CERK-204	ENST00000471929	PKD1L3	Q7Z443	1732 aa		13.68	□□□□□ -0.22
CERK-204	ENST00000471929	U2SURP	O15042	1029 aa	Known RBP	13.68	□□□□□ -0.22
CERK-204	ENST00000471929	CABP4	P57796	275 aa		13.68	□□□□□ -0.22
CERK-204	ENST00000471929	AKAP4	Q5JQC9	854 aa		13.68	□□□□□ -0.22
CERK-204	ENST00000471929	SLC16A10	Q8TF71	515 aa		13.68	□□□□□ -0.22
CERK-204	ENST00000471929	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.68	□□□□□ -0.22
CERK-204	ENST00000471929	BTAF1	O14981	1849 aa		13.67	□□□□□ -0.22
CERK-204	ENST00000471929	GAS2L2	Q8NHY3	880 aa		13.67	□□□□□ -0.22
CERK-204	ENST00000471929	MTFR1L	Q9H019	292 aa		13.67	□□□□□ -0.22
CERK-204	ENST00000471929	DOT1L	Q8TEK3	1739 aa		13.67	□□□□□ -0.22
CERK-204	ENST00000471929	POLD1	P28340	1107 aa		13.66	□□□□□ -0.22
CERK-204	ENST00000471929	AK7	Q96M32	723 aa		13.66	□□□□□ -0.22
CERK-204	ENST00000471929	PNN	Q9H307	717 aa	Known RBP	13.66	□□□□□ -0.22
CERK-204	ENST00000471929	AEBP1	Q8IUX7	1158 aa		13.65	□□□□□ -0.22
CERK-204	ENST00000471929	PIGB	Q92521	554 aa		13.65	□□□□□ -0.22
CERK-204	ENST00000471929	HMOX1	P09601	288 aa		13.64	□□□□□ -0.23
CERK-204	ENST00000471929	PPP2R1A	P30153	589 aa		13.64	□□□□□ -0.23
CERK-204	ENST00000471929	RALBP1	Q15311	655 aa		13.64	□□□□□ -0.23
CERK-204	ENST00000471929	LOC102724428	A0A0B4J2F2	783 aa		13.63	□□□□□ -0.23
CERK-204	ENST00000471929	MSH5	O43196	834 aa		13.63	□□□□□ -0.23
CERK-204	ENST00000471929	SIK1	P57059	783 aa		13.63	□□□□□ -0.23
CERK-204	ENST00000471929	AKT1S1	Q96B36	256 aa		13.63	□□□□□ -0.23
CERK-204	ENST00000471929	LRRC4B	Q9NT99	713 aa		13.63	□□□□□ -0.23
CERK-204	ENST00000471929	SHANK3	Q9BYB0	1731 aa		13.63	□□□□□ -0.23
CERK-204	ENST00000471929	ZBTB7A	O95365	584 aa		13.62	□□□□□ -0.23
CERK-204	ENST00000471929	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.62	□□□□□ -0.23
CERK-204	ENST00000471929	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
CERK-204	ENST00000471929	ATP6V1A	P38606	617 aa		13.61	□□□□□ -0.23
CERK-204	ENST00000471929	ZNF827	Q17R98	1081 aa		13.61	□□□□□ -0.23
CERK-204	ENST00000471929	FCHSD2	O94868	740 aa		13.6	□□□□□ -0.23
CERK-204	ENST00000471929	RTF1	Q92541	710 aa	Known RBP	13.6	□□□□□ -0.23
CERK-204	ENST00000471929	RBM42	Q9BTD8	480 aa	Known RBP	13.6	□□□□□ -0.23
CERK-204	ENST00000471929	GNAT3	A8MTJ3	354 aa		13.59	□□□□□ -0.23
CERK-204	ENST00000471929	TEF	Q10587	303 aa		13.59	□□□□□ -0.23
CERK-204	ENST00000471929	TTC5	Q8N0Z6	440 aa		13.59	□□□□□ -0.23
CERK-204	ENST00000471929	SLC52A2	Q9HAB3	445 aa		13.59	□□□□□ -0.23
CERK-204	ENST00000471929	ATG3	Q9NT62	314 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms