RNA–Protein interactions for RNA: ENST00000471929.1

CERK-204, Transcript of ceramide kinase, humanhuman

TSL 4

Gene CERK, Length 567 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERK-204ENST00000471929 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
CERK-204ENST00000471929 CCDC180Q9P1Z9 1646 aa22.01■■□□□ 1.11
CERK-204ENST00000471929 ABCC9O60706 1549 aa21.63■■□□□ 1.05
CERK-204ENST00000471929 RB1CC1Q8TDY2 1594 aa20.84■□□□□ 0.93
CERK-204ENST00000471929 NACADO15069 1562 aa20.79■□□□□ 0.92
CERK-204ENST00000471929 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
CERK-204ENST00000471929 MYO15BQ96JP2 1530 aa20.65■□□□□ 0.9
CERK-204ENST00000471929 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
CERK-204ENST00000471929 ZCCHC6Q5VYS8 1495 aaKnown RBP20.54■□□□□ 0.88
CERK-204ENST00000471929 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
CERK-204ENST00000471929 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
CERK-204ENST00000471929 SHROOM4Q9ULL8 1493 aa20.1■□□□□ 0.81
CERK-204ENST00000471929 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
CERK-204ENST00000471929 SCRIBQ14160 1630 aa20.02■□□□□ 0.8
CERK-204ENST00000471929 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
CERK-204ENST00000471929 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
CERK-204ENST00000471929 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
CERK-204ENST00000471929 DNAJC5Q9H3Z4 198 aa19.51■□□□□ 0.71
CERK-204ENST00000471929 CECR2Q9BXF3 1484 aa19.51■□□□□ 0.71
CERK-204ENST00000471929 BAZ1AQ9NRL2 1556 aaPredicted RBP19.21■□□□□ 0.67
CERK-204ENST00000471929 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
CERK-204ENST00000471929 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
CERK-204ENST00000471929 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
CERK-204ENST00000471929 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
CERK-204ENST00000471929 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
CERK-204ENST00000471929 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.63
CERK-204ENST00000471929 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
CERK-204ENST00000471929 MROH2BQ7Z745 1585 aa18.95■□□□□ 0.62
CERK-204ENST00000471929 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
CERK-204ENST00000471929 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
CERK-204ENST00000471929 WIZO95785 1651 aa18.7■□□□□ 0.58
CERK-204ENST00000471929 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
CERK-204ENST00000471929 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
CERK-204ENST00000471929 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
CERK-204ENST00000471929 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
CERK-204ENST00000471929 CUX2O14529 1486 aa18.62■□□□□ 0.57
CERK-204ENST00000471929 NESP48681 1621 aa18.6■□□□□ 0.57
CERK-204ENST00000471929 CFTRP13569 1480 aa18.45■□□□□ 0.54
CERK-204ENST00000471929 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
CERK-204ENST00000471929 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.54
CERK-204ENST00000471929 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
CERK-204ENST00000471929 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
CERK-204ENST00000471929 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
CERK-204ENST00000471929 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
CERK-204ENST00000471929 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
CERK-204ENST00000471929 WDR62O43379 1518 aa18.28■□□□□ 0.52
CERK-204ENST00000471929 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
CERK-204ENST00000471929 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
CERK-204ENST00000471929 ABCC8Q09428 1581 aa18.18■□□□□ 0.5
CERK-204ENST00000471929 URB2Q14146 1524 aaKnown RBP18.12■□□□□ 0.49
CERK-204ENST00000471929 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
CERK-204ENST00000471929 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
CERK-204ENST00000471929 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
CERK-204ENST00000471929 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
CERK-204ENST00000471929 SOGA1O94964 1423 aa17.86■□□□□ 0.45
CERK-204ENST00000471929 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
CERK-204ENST00000471929 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
CERK-204ENST00000471929 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
CERK-204ENST00000471929 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
CERK-204ENST00000471929 CUX1P39880 1505 aa17.81■□□□□ 0.44
CERK-204ENST00000471929 TARBP1Q13395 1621 aaKnown RBP17.78■□□□□ 0.44
CERK-204ENST00000471929 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
CERK-204ENST00000471929 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
CERK-204ENST00000471929 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
CERK-204ENST00000471929 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
CERK-204ENST00000471929 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
CERK-204ENST00000471929 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
CERK-204ENST00000471929 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
CERK-204ENST00000471929 FBLN2P98095 1184 aa17.68■□□□□ 0.42
CERK-204ENST00000471929 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
CERK-204ENST00000471929 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
CERK-204ENST00000471929 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
CERK-204ENST00000471929 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
CERK-204ENST00000471929 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
CERK-204ENST00000471929 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
CERK-204ENST00000471929 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
CERK-204ENST00000471929 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
CERK-204ENST00000471929 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
CERK-204ENST00000471929 CHD1O14646 1710 aa17.51■□□□□ 0.39
CERK-204ENST00000471929 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
CERK-204ENST00000471929 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
CERK-204ENST00000471929 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
CERK-204ENST00000471929 KIF27Q86VH2 1401 aa17.46■□□□□ 0.39
CERK-204ENST00000471929 RIMBP3CA6NJZ7 1639 aa17.45■□□□□ 0.38
CERK-204ENST00000471929 RIMBP3BA6NNM3 1639 aa17.45■□□□□ 0.38
CERK-204ENST00000471929 RIMBP3Q9UFD9 1639 aa17.45■□□□□ 0.38
CERK-204ENST00000471929 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
CERK-204ENST00000471929 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
CERK-204ENST00000471929 ADAMTS12P58397 1594 aa17.41■□□□□ 0.38
CERK-204ENST00000471929 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
CERK-204ENST00000471929 CLASP1Q7Z460 1538 aa17.39■□□□□ 0.37
CERK-204ENST00000471929 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
CERK-204ENST00000471929 NUP160Q12769 1436 aa17.33■□□□□ 0.36
CERK-204ENST00000471929 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.36
CERK-204ENST00000471929 CUL7Q14999 1698 aa17.29■□□□□ 0.36
CERK-204ENST00000471929 IGF1RP08069 1367 aa17.29■□□□□ 0.36
CERK-204ENST00000471929 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
CERK-204ENST00000471929 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
CERK-204ENST00000471929 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
CERK-204ENST00000471929 JPH4Q96JJ6 628 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms