RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 C17orf53Q8N3J3 647 aaPredicted RBP16.83■□□□□ 0.28
NPHP4-207ENST00000470763 IL16Q14005 1332 aa16.83■□□□□ 0.28
NPHP4-207ENST00000470763 ST18O60284 1047 aa16.83■□□□□ 0.28
NPHP4-207ENST00000470763 ZNF710Q8N1W2 664 aa16.83■□□□□ 0.28
NPHP4-207ENST00000470763 MYRIPQ8NFW9 859 aa16.83■□□□□ 0.28
NPHP4-207ENST00000470763 TET3O43151 1660 aa16.82■□□□□ 0.28
NPHP4-207ENST00000470763 APBB1O00213 710 aa16.82■□□□□ 0.28
NPHP4-207ENST00000470763 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-207ENST00000470763 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
NPHP4-207ENST00000470763 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
NPHP4-207ENST00000470763 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-207ENST00000470763 TSPYL6Q8N831 410 aa16.82■□□□□ 0.28
NPHP4-207ENST00000470763 EFCAB6Q5THR3 1501 aa16.81■□□□□ 0.28
NPHP4-207ENST00000470763 TTC22Q5TAA0 569 aa16.81■□□□□ 0.28
NPHP4-207ENST00000470763 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-207ENST00000470763 UBR1Q8IWV7 1749 aa16.81■□□□□ 0.28
NPHP4-207ENST00000470763 KIF1BO60333 1816 aa16.81■□□□□ 0.28
NPHP4-207ENST00000470763 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
NPHP4-207ENST00000470763 TSPY26PQ9H489 355 aa16.8■□□□□ 0.28
NPHP4-207ENST00000470763 USP32Q8NFA0 1604 aa16.8■□□□□ 0.28
NPHP4-207ENST00000470763 INTS3Q68E01 1043 aaKnown RBP16.79■□□□□ 0.28
NPHP4-207ENST00000470763 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
NPHP4-207ENST00000470763 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
NPHP4-207ENST00000470763 ANKRD36BQ8N2N9 1353 aa16.79■□□□□ 0.28
NPHP4-207ENST00000470763 UTP14CQ5TAP6 766 aaKnown RBP16.79■□□□□ 0.28
NPHP4-207ENST00000470763 NOL8Q76FK4 1167 aaKnown RBP16.79■□□□□ 0.28
NPHP4-207ENST00000470763 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
NPHP4-207ENST00000470763 ATP2B3Q16720 1220 aa16.78■□□□□ 0.28
NPHP4-207ENST00000470763 PPP4R3BQ5MIZ7 849 aa16.78■□□□□ 0.28
NPHP4-207ENST00000470763 TTC12Q9H892 705 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-207ENST00000470763 VAMP4O75379 141 aa16.77■□□□□ 0.28
NPHP4-207ENST00000470763 MBD3O95983 291 aa16.77■□□□□ 0.28
NPHP4-207ENST00000470763 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-207ENST00000470763 SDSP20132 328 aa16.77■□□□□ 0.28
NPHP4-207ENST00000470763 PIK3C2BO00750 1634 aa16.77■□□□□ 0.27
NPHP4-207ENST00000470763 IFT172Q9UG01 1749 aa16.77■□□□□ 0.27
NPHP4-207ENST00000470763 SMARCA5O60264 1052 aaPredicted RBP16.77■□□□□ 0.27
NPHP4-207ENST00000470763 CHMP4BQ9H444 224 aaKnown RBP16.77■□□□□ 0.27
NPHP4-207ENST00000470763 USP25Q9UHP3 1055 aa16.77■□□□□ 0.27
NPHP4-207ENST00000470763 NOLC1Q14978 699 aaKnown RBP eCLIP16.76■□□□□ 0.27
NPHP4-207ENST00000470763 NSD2O96028 1365 aa16.76■□□□□ 0.27
NPHP4-207ENST00000470763 IDI1Q13907 227 aa16.76■□□□□ 0.27
NPHP4-207ENST00000470763 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
NPHP4-207ENST00000470763 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
NPHP4-207ENST00000470763 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
NPHP4-207ENST00000470763 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
NPHP4-207ENST00000470763 NEK4P51957 841 aa16.75■□□□□ 0.27
NPHP4-207ENST00000470763 PIBF1Q8WXW3 757 aa16.75■□□□□ 0.27
NPHP4-207ENST00000470763 NPHP4O75161 1426 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-207ENST00000470763 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 C14orf93Q9H972 538 aaKnown RBP16.74■□□□□ 0.27
NPHP4-207ENST00000470763 ABCC4O15439 1325 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 GADD45BO75293 160 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-207ENST00000470763 LTKP29376 864 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 PRIMPOLQ96LW4 560 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
NPHP4-207ENST00000470763 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
NPHP4-207ENST00000470763 SLIT1O75093 1534 aa16.73■□□□□ 0.27
NPHP4-207ENST00000470763 IGSF3O75054 1194 aa16.73■□□□□ 0.27
NPHP4-207ENST00000470763 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
NPHP4-207ENST00000470763 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
NPHP4-207ENST00000470763 FBLN1P23142 703 aa16.73■□□□□ 0.27
NPHP4-207ENST00000470763 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-207ENST00000470763 ARHGAP45Q92619 1136 aa16.73■□□□□ 0.27
NPHP4-207ENST00000470763 KIF3AQ9Y496 699 aa16.73■□□□□ 0.27
NPHP4-207ENST00000470763 HMGN5P82970 282 aaKnown RBP16.72■□□□□ 0.27
NPHP4-207ENST00000470763 HMOX1P09601 288 aa16.72■□□□□ 0.27
NPHP4-207ENST00000470763 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
NPHP4-207ENST00000470763 KNDC1Q76NI1 1749 aa16.72■□□□□ 0.27
NPHP4-207ENST00000470763 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
NPHP4-207ENST00000470763 TULP4Q9NRJ4 1543 aa16.71■□□□□ 0.27
NPHP4-207ENST00000470763 SETBP1Q9Y6X0 1596 aa16.71■□□□□ 0.27
NPHP4-207ENST00000470763 BRD1O95696 1058 aa16.71■□□□□ 0.27
NPHP4-207ENST00000470763 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
NPHP4-207ENST00000470763 FGD1P98174 961 aa16.71■□□□□ 0.27
NPHP4-207ENST00000470763 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
NPHP4-207ENST00000470763 REC8O95072 547 aa16.71■□□□□ 0.26
NPHP4-207ENST00000470763 ADCY5O95622 1261 aa16.71■□□□□ 0.26
NPHP4-207ENST00000470763 SYAP1Q96A49 352 aaPredicted RBP16.71■□□□□ 0.26
NPHP4-207ENST00000470763 PHACTR3Q96KR7 559 aa16.71■□□□□ 0.26
NPHP4-207ENST00000470763 FYB1O15117 783 aa16.7■□□□□ 0.26
NPHP4-207ENST00000470763 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
NPHP4-207ENST00000470763 ADGRB1O14514 1584 aa16.7■□□□□ 0.26
NPHP4-207ENST00000470763 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
NPHP4-207ENST00000470763 TWISTNBQ3B726 338 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-207ENST00000470763 MBIPQ9NS73 344 aa16.7■□□□□ 0.26
NPHP4-207ENST00000470763 TMEM2Q9UHN6 1383 aa16.7■□□□□ 0.26
NPHP4-207ENST00000470763 TCHHQ07283 1943 aa16.7■□□□□ 0.26
NPHP4-207ENST00000470763 TXNDC2Q86VQ3 553 aa16.69■□□□□ 0.26
NPHP4-207ENST00000470763 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
NPHP4-207ENST00000470763 ERC2O15083 957 aa16.69■□□□□ 0.26
NPHP4-207ENST00000470763 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
NPHP4-207ENST00000470763 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
NPHP4-207ENST00000470763 HCLS1P14317 486 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-207ENST00000470763 SLC52A1Q9NWF4 448 aa16.68■□□□□ 0.26
NPHP4-207ENST00000470763 PDCL2Q8N4E4 241 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms