RNA–Protein interactions for RNA: ENST00000470478.1

SEC23IP-205, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 285 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-205ENST00000470478 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
SEC23IP-205ENST00000470478 SYT17Q9BSW7 474 aa17.56■□□□□ 0.4
SEC23IP-205ENST00000470478 NBPF6Q5VWK0 638 aa17.55■□□□□ 0.4
SEC23IP-205ENST00000470478 NBPF4Q96M43 638 aa17.55■□□□□ 0.4
SEC23IP-205ENST00000470478 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
SEC23IP-205ENST00000470478 KCNQ4P56696 695 aa17.54■□□□□ 0.4
SEC23IP-205ENST00000470478 TMF1P82094 1093 aa17.54■□□□□ 0.4
SEC23IP-205ENST00000470478 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
SEC23IP-205ENST00000470478 PNPLA7Q6ZV29 1317 aa17.53■□□□□ 0.4
SEC23IP-205ENST00000470478 CHD4Q14839 1912 aa17.53■□□□□ 0.4
SEC23IP-205ENST00000470478 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
SEC23IP-205ENST00000470478 SLC24A1O60721 1099 aa17.53■□□□□ 0.4
SEC23IP-205ENST00000470478 ZCRB1Q8TBF4 217 aaKnown RBP17.53■□□□□ 0.4
SEC23IP-205ENST00000470478 SLC27A3Q5K4L6 730 aa17.52■□□□□ 0.4
SEC23IP-205ENST00000470478 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
SEC23IP-205ENST00000470478 ARXQ96QS3 562 aa17.52■□□□□ 0.4
SEC23IP-205ENST00000470478 TOGARAM1Q9Y4F4 1720 aa17.52■□□□□ 0.39
SEC23IP-205ENST00000470478 MAP3K5Q99683 1374 aa17.52■□□□□ 0.39
SEC23IP-205ENST00000470478 ANKRD26Q9UPS8 1709 aa17.51■□□□□ 0.39
SEC23IP-205ENST00000470478 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
SEC23IP-205ENST00000470478 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
SEC23IP-205ENST00000470478 INSRP06213 1382 aa17.5■□□□□ 0.39
SEC23IP-205ENST00000470478 CARD14Q9BXL6 1004 aa17.49■□□□□ 0.39
SEC23IP-205ENST00000470478 PKD1L3Q7Z443 1732 aa17.49■□□□□ 0.39
SEC23IP-205ENST00000470478 TAF1LQ8IZX4 1826 aa17.49■□□□□ 0.39
SEC23IP-205ENST00000470478 C5P01031 1676 aa17.48■□□□□ 0.39
SEC23IP-205ENST00000470478 SMG6Q86US8 1419 aaKnown RBP17.48■□□□□ 0.39
SEC23IP-205ENST00000470478 NSD3Q9BZ95 1437 aa17.48■□□□□ 0.39
SEC23IP-205ENST00000470478 ITGB4P16144 1822 aa17.48■□□□□ 0.39
SEC23IP-205ENST00000470478 FLT4P35916 1363 aa17.48■□□□□ 0.39
SEC23IP-205ENST00000470478 CGNL1Q0VF96 1302 aa17.47■□□□□ 0.39
SEC23IP-205ENST00000470478 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
SEC23IP-205ENST00000470478 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
SEC23IP-205ENST00000470478 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
SEC23IP-205ENST00000470478 EMILIN1Q9Y6C2 1016 aa17.46■□□□□ 0.39
SEC23IP-205ENST00000470478 NCAPD2Q15021 1401 aa17.46■□□□□ 0.39
SEC23IP-205ENST00000470478 MAP2P11137 1827 aaKnown RBP17.45■□□□□ 0.38
SEC23IP-205ENST00000470478 SLC16A10Q8TF71 515 aa17.45■□□□□ 0.38
SEC23IP-205ENST00000470478 RAPGEF4Q8WZA2 1011 aa17.45■□□□□ 0.38
SEC23IP-205ENST00000470478 TFCP2L1Q9NZI6 479 aa17.45■□□□□ 0.38
SEC23IP-205ENST00000470478 TATP17735 454 aaPredicted RBP17.44■□□□□ 0.38
SEC23IP-205ENST00000470478 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
SEC23IP-205ENST00000470478 CYP27B1O15528 508 aa17.43■□□□□ 0.38
SEC23IP-205ENST00000470478 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
SEC23IP-205ENST00000470478 PCDH11XQ9BZA7 1347 aa17.43■□□□□ 0.38
SEC23IP-205ENST00000470478 PCDH11YQ9BZA8 1340 aa17.43■□□□□ 0.38
SEC23IP-205ENST00000470478 POLD1P28340 1107 aa17.41■□□□□ 0.38
SEC23IP-205ENST00000470478 COL23A1Q86Y22 540 aaPredicted RBP17.41■□□□□ 0.38
SEC23IP-205ENST00000470478 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
SEC23IP-205ENST00000470478 NLGN2Q8NFZ4 835 aa17.41■□□□□ 0.38
SEC23IP-205ENST00000470478 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
SEC23IP-205ENST00000470478 C4BP0C0L5 1744 aa17.4■□□□□ 0.38
SEC23IP-205ENST00000470478 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.38
SEC23IP-205ENST00000470478 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
SEC23IP-205ENST00000470478 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
SEC23IP-205ENST00000470478 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
SEC23IP-205ENST00000470478 GPR162Q16538 588 aa17.36■□□□□ 0.37
SEC23IP-205ENST00000470478 WASHC2AQ641Q2 1341 aa17.36■□□□□ 0.37
SEC23IP-205ENST00000470478 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
SEC23IP-205ENST00000470478 EYA1Q99502 592 aa17.35■□□□□ 0.37
SEC23IP-205ENST00000470478 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
SEC23IP-205ENST00000470478 MSH5O43196 834 aa17.34■□□□□ 0.37
SEC23IP-205ENST00000470478 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
SEC23IP-205ENST00000470478 PIGBQ92521 554 aa17.34■□□□□ 0.37
SEC23IP-205ENST00000470478 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
SEC23IP-205ENST00000470478 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.36
SEC23IP-205ENST00000470478 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
SEC23IP-205ENST00000470478 SMIM5Q71RC9 77 aa17.32■□□□□ 0.36
SEC23IP-205ENST00000470478 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
SEC23IP-205ENST00000470478 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
SEC23IP-205ENST00000470478 LINC00116Q8NCU8 138 aa17.3■□□□□ 0.36
SEC23IP-205ENST00000470478 SMARCC1Q92922 1105 aaPredicted RBP17.3■□□□□ 0.36
SEC23IP-205ENST00000470478 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
SEC23IP-205ENST00000470478 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
SEC23IP-205ENST00000470478 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
SEC23IP-205ENST00000470478 PHKG2P15735 406 aa17.28■□□□□ 0.36
SEC23IP-205ENST00000470478 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
SEC23IP-205ENST00000470478 AK7Q96M32 723 aa17.28■□□□□ 0.36
SEC23IP-205ENST00000470478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.36
SEC23IP-205ENST00000470478 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.36
SEC23IP-205ENST00000470478 PHF14O94880 888 aa17.27■□□□□ 0.36
SEC23IP-205ENST00000470478 SIK1P57059 783 aa17.27■□□□□ 0.36
SEC23IP-205ENST00000470478 ITPK1Q13572 414 aa17.27■□□□□ 0.36
SEC23IP-205ENST00000470478 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
SEC23IP-205ENST00000470478 ASAP1Q9ULH1 1129 aa17.27■□□□□ 0.36
SEC23IP-205ENST00000470478 IGSF1Q8N6C5 1336 aa17.26■□□□□ 0.35
SEC23IP-205ENST00000470478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.26■□□□□ 0.35
SEC23IP-205ENST00000470478 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
SEC23IP-205ENST00000470478 TMOD3Q9NYL9 352 aa17.26■□□□□ 0.35
SEC23IP-205ENST00000470478 KDRP35968 1356 aa17.26■□□□□ 0.35
SEC23IP-205ENST00000470478 COL5A3P25940 1745 aaPredicted RBP17.25■□□□□ 0.35
SEC23IP-205ENST00000470478 C1QTNF8P60827 252 aa17.25■□□□□ 0.35
SEC23IP-205ENST00000470478 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
SEC23IP-205ENST00000470478 CD2APQ9Y5K6 639 aa17.25■□□□□ 0.35
SEC23IP-205ENST00000470478 ZNF831Q5JPB2 1677 aa17.24■□□□□ 0.35
SEC23IP-205ENST00000470478 PANK3Q9H999 370 aa17.24■□□□□ 0.35
SEC23IP-205ENST00000470478 ATG3Q9NT62 314 aa17.24■□□□□ 0.35
SEC23IP-205ENST00000470478 PLEKHG2Q9H7P9 1386 aa17.24■□□□□ 0.35
SEC23IP-205ENST00000470478 KDM6AO15550 1401 aaPredicted RBP17.23■□□□□ 0.35
SEC23IP-205ENST00000470478 SSFA2P28290 1259 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms