RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 IRX6P78412 446 aaPredicted RBP9.09□□□□□ -0.95
KDM3A-210ENST00000470160 AEBP1Q8IUX7 1158 aa9.09□□□□□ -0.95
KDM3A-210ENST00000470160 KDM2BQ8NHM5 1336 aa9.09□□□□□ -0.95
KDM3A-210ENST00000470160 CEMIPQ8WUJ3 1361 aa9.09□□□□□ -0.95
KDM3A-210ENST00000470160 C14orf37Q86TY3 774 aa9.09□□□□□ -0.95
KDM3A-210ENST00000470160 FOXO3O43524 673 aa9.08□□□□□ -0.96
KDM3A-210ENST00000470160 BCAR3O75815 825 aa9.08□□□□□ -0.96
KDM3A-210ENST00000470160 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
KDM3A-210ENST00000470160 EXOSC9Q06265 439 aaKnown RBP9.08□□□□□ -0.96
KDM3A-210ENST00000470160 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
KDM3A-210ENST00000470160 RBM33Q96EV2 1170 aaKnown RBP9.08□□□□□ -0.96
KDM3A-210ENST00000470160 CRBNQ96SW2 442 aa9.08□□□□□ -0.96
KDM3A-210ENST00000470160 SCN11AQ9UI33 1791 aa9.08□□□□□ -0.96
KDM3A-210ENST00000470160 BRINP3Q76B58 766 aa9.07□□□□□ -0.96
KDM3A-210ENST00000470160 VAMP4O75379 141 aa9.07□□□□□ -0.96
KDM3A-210ENST00000470160 KIF16BQ96L93 1317 aa9.06□□□□□ -0.96
KDM3A-210ENST00000470160 MTHFSDQ2M296 383 aaKnown RBP9.06□□□□□ -0.96
KDM3A-210ENST00000470160 C20orf194Q5TEA3 1177 aa9.06□□□□□ -0.96
KDM3A-210ENST00000470160 MAP3K5Q99683 1374 aa9.06□□□□□ -0.96
KDM3A-210ENST00000470160 ZNF335Q9H4Z2 1342 aaPredicted RBP9.06□□□□□ -0.96
KDM3A-210ENST00000470160 PAK3O75914 559 aaPredicted RBP9.06□□□□□ -0.96
KDM3A-210ENST00000470160 MBIPQ9NS73 344 aa9.06□□□□□ -0.96
KDM3A-210ENST00000470160 PLIN1O60240 522 aa9.06□□□□□ -0.96
KDM3A-210ENST00000470160 CCDC136Q96JN2 1154 aa9.06□□□□□ -0.96
KDM3A-210ENST00000470160 MRC1P22897 1456 aa9.05□□□□□ -0.96
KDM3A-210ENST00000470160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.05□□□□□ -0.967e-8■■■□□ 17.7
KDM3A-210ENST00000470160 PDE4CQ08493 712 aa9.05□□□□□ -0.96
KDM3A-210ENST00000470160 AMOTQ4VCS5 1084 aa9.05□□□□□ -0.96
KDM3A-210ENST00000470160 ZKSCAN2Q63HK3 967 aa9.05□□□□□ -0.96
KDM3A-210ENST00000470160 B4GALNT3Q6L9W6 998 aa9.05□□□□□ -0.96
KDM3A-210ENST00000470160 TSR2Q969E8 191 aaKnown RBP9.05□□□□□ -0.96
KDM3A-210ENST00000470160 SLAIN2Q9P270 581 aa9.05□□□□□ -0.96
KDM3A-210ENST00000470160 ERBB3P21860 1342 aa9.04□□□□□ -0.96
KDM3A-210ENST00000470160 PLCH1Q4KWH8 1693 aa9.04□□□□□ -0.96
KDM3A-210ENST00000470160 SSH1Q8WYL5 1049 aa9.04□□□□□ -0.96
KDM3A-210ENST00000470160 NBPF6Q5VWK0 638 aa9.04□□□□□ -0.96
KDM3A-210ENST00000470160 CENPQQ7L2Z9 268 aaPredicted RBP9.04□□□□□ -0.96
KDM3A-210ENST00000470160 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
KDM3A-210ENST00000470160 NBPF4Q96M43 638 aa9.04□□□□□ -0.96
KDM3A-210ENST00000470160 GNAT3A8MTJ3 354 aa9.03□□□□□ -0.96
KDM3A-210ENST00000470160 IPO8O15397 1037 aaKnown RBP9.03□□□□□ -0.96
KDM3A-210ENST00000470160 ROBO1Q9Y6N7 1651 aa9.03□□□□□ -0.96
KDM3A-210ENST00000470160 COL14A1Q05707 1796 aaKnown RBP9.03□□□□□ -0.96
KDM3A-210ENST00000470160 SHANK3Q9BYB0 1731 aa9.03□□□□□ -0.96
KDM3A-210ENST00000470160 ATF7IPQ6VMQ6 1270 aa9.03□□□□□ -0.96
KDM3A-210ENST00000470160 TSHZ2Q9NRE2 1034 aa9.03□□□□□ -0.96
KDM3A-210ENST00000470160 WNK3Q9BYP7 1800 aa9.02□□□□□ -0.96
KDM3A-210ENST00000470160 MVPQ14764 893 aaKnown RBP9.02□□□□□ -0.97
KDM3A-210ENST00000470160 NUTM2GQ5VZR2 741 aa9.02□□□□□ -0.97
KDM3A-210ENST00000470160 IBTKQ9P2D0 1353 aaPredicted RBP9.02□□□□□ -0.97
KDM3A-210ENST00000470160 HEG1Q9ULI3 1381 aa9.02□□□□□ -0.97
KDM3A-210ENST00000470160 ABCC4O15439 1325 aa9.02□□□□□ -0.97
KDM3A-210ENST00000470160 AKAP4Q5JQC9 854 aa9.02□□□□□ -0.97
KDM3A-210ENST00000470160 RGS12O14924 1447 aa9.02□□□□□ -0.97
KDM3A-210ENST00000470160 HOXB7P09629 217 aa9.01□□□□□ -0.97
KDM3A-210ENST00000470160 DZIP1LQ8IYY4 767 aaKnown RBP9.01□□□□□ -0.97
KDM3A-210ENST00000470160 ANKRD24Q8TF21 1146 aa9.01□□□□□ -0.97
KDM3A-210ENST00000470160 CLUAP1Q96AJ1 413 aa9.01□□□□□ -0.97
KDM3A-210ENST00000470160 AXIN2Q9Y2T1 843 aa9.01□□□□□ -0.97
KDM3A-210ENST00000470160 PAPPAQ13219 1627 aa9.01□□□□□ -0.97
KDM3A-210ENST00000470160 PXDNLA1KZ92 1463 aa9.01□□□□□ -0.97
KDM3A-210ENST00000470160 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
KDM3A-210ENST00000470160 TRIM27P14373 513 aa9.01□□□□□ -0.97
KDM3A-210ENST00000470160 TWISTNBQ3B726 338 aaPredicted RBP9.01□□□□□ -0.97
KDM3A-210ENST00000470160 PLEKHO1Q53GL0 409 aaPredicted RBP9.01□□□□□ -0.97
KDM3A-210ENST00000470160 CHMP4BQ9H444 224 aaKnown RBP9.01□□□□□ -0.97
KDM3A-210ENST00000470160 COL16A1Q07092 1604 aaPredicted RBP9.01□□□□□ -0.97
KDM3A-210ENST00000470160 KCNA4P22459 653 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 IL17REQ8NFR9 667 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 SMC4Q9NTJ3 1288 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 COL5A2P05997 1499 aaPredicted RBP9□□□□□ -0.97
KDM3A-210ENST00000470160 TCERG1O14776 1098 aaKnown RBP9□□□□□ -0.97
KDM3A-210ENST00000470160 RLBP1P12271 317 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 RTF1Q92541 710 aaKnown RBP9□□□□□ -0.97
KDM3A-210ENST00000470160 THUMPD2Q9BTF0 503 aaKnown RBP9□□□□□ -0.97
KDM3A-210ENST00000470160 DDX19BQ9UMR2 479 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 PTPRCP08575 1304 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 CHMP4AQ9BY43 222 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 UBR2Q8IWV8 1755 aa9□□□□□ -0.97
KDM3A-210ENST00000470160 TAF7Q15545 349 aaPredicted RBP8.99□□□□□ -0.97
KDM3A-210ENST00000470160 TSPYL6Q8N831 410 aa8.99□□□□□ -0.97
KDM3A-210ENST00000470160 ANP32EQ9BTT0 268 aa8.99□□□□□ -0.97
KDM3A-210ENST00000470160 HDAC1Q13547 482 aaPredicted RBP8.99□□□□□ -0.97
KDM3A-210ENST00000470160 API5Q9BZZ5 524 aaKnown RBP8.99□□□□□ -0.97
KDM3A-210ENST00000470160 NOB1Q9ULX3 412 aaKnown RBP8.99□□□□□ -0.97
KDM3A-210ENST00000470160 NRAPQ86VF7 1730 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 SOX12O15370 315 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 DCTN1Q14203 1278 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 MCM10Q7L590 875 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 PANK1Q8TE04 598 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 TAOK2Q9UL54 1235 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 GLI3P10071 1580 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 LRP6O75581 1613 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 NWD2Q9ULI1 1742 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 LAMB4A4D0S4 1761 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 MEGF6O75095 1541 aa8.98□□□□□ -0.97
KDM3A-210ENST00000470160 XPCQ01831 940 aaPredicted RBP8.98□□□□□ -0.97
KDM3A-210ENST00000470160 INTS3Q68E01 1043 aaKnown RBP8.98□□□□□ -0.97
KDM3A-210ENST00000470160 ZBTB40Q9NUA8 1239 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms