RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 FOXD4L6Q3SYB3 417 aaPredicted RBP14.91□□□□□ -0.02
VARS2-205ENST00000469358 FOXD4L3Q6VB84 417 aaPredicted RBP14.91□□□□□ -0.02
VARS2-205ENST00000469358 GOLGA6L22H0YM25 854 aa14.91□□□□□ -0.02
VARS2-205ENST00000469358 RABEP1Q15276 862 aa14.9□□□□□ -0.02
VARS2-205ENST00000469358 ATP10DQ9P241 1426 aa14.9□□□□□ -0.02
VARS2-205ENST00000469358 INTS3Q68E01 1043 aaKnown RBP14.9□□□□□ -0.02
VARS2-205ENST00000469358 PREX1Q8TCU6 1659 aa14.9□□□□□ -0.02
VARS2-205ENST00000469358 NSFL1CQ9UNZ2 370 aaKnown RBP14.89□□□□□ -0.03
VARS2-205ENST00000469358 EXOC6BQ9Y2D4 811 aa14.89□□□□□ -0.03
VARS2-205ENST00000469358 TPRNQ4KMQ1 711 aa14.89□□□□□ -0.03
VARS2-205ENST00000469358 ZDHHC9Q9Y397 364 aa14.89□□□□□ -0.03
VARS2-205ENST00000469358 CDC42BPGQ6DT37 1551 aa14.89□□□□□ -0.03
VARS2-205ENST00000469358 PRR36Q9H6K5 1346 aa14.89□□□□□ -0.03
VARS2-205ENST00000469358 LMOD3Q0VAK6 560 aa14.89□□□□□ -0.03
VARS2-205ENST00000469358 KLHL40Q2TBA0 621 aa14.89□□□□□ -0.03
VARS2-205ENST00000469358 LMBRD1Q9NUN5 540 aa14.89□□□□□ -0.03
VARS2-205ENST00000469358 CLTCQ00610 1675 aaKnown RBP14.89□□□□□ -0.03
VARS2-205ENST00000469358 RGS12O14924 1447 aa14.88□□□□□ -0.03
VARS2-205ENST00000469358 RTL1A6NKG5 1358 aa14.88□□□□□ -0.03
VARS2-205ENST00000469358 ZSCAN23Q3MJ62 389 aa14.88□□□□□ -0.03
VARS2-205ENST00000469358 RBSNQ9H1K0 784 aa14.88□□□□□ -0.03
VARS2-205ENST00000469358 CCDC61Q9Y6R9 512 aa14.88□□□□□ -0.03
VARS2-205ENST00000469358 CPSF1Q10570 1443 aaKnown RBP14.87□□□□□ -0.03
VARS2-205ENST00000469358 EDC4Q6P2E9 1401 aaKnown RBP14.87□□□□□ -0.03
VARS2-205ENST00000469358 PRIM1P49642 420 aaKnown RBP14.87□□□□□ -0.03
VARS2-205ENST00000469358 GPT2Q8TD30 523 aa14.87□□□□□ -0.03
VARS2-205ENST00000469358 NEO1Q92859 1461 aa14.87□□□□□ -0.03
VARS2-205ENST00000469358 DLG5Q8TDM6 1919 aa14.87□□□□□ -0.03
VARS2-205ENST00000469358 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
VARS2-205ENST00000469358 ATP7BP35670 1465 aa14.86□□□□□ -0.03
VARS2-205ENST00000469358 CHL1O00533 1208 aa14.86□□□□□ -0.03
VARS2-205ENST00000469358 DTNBO60941 627 aa14.86□□□□□ -0.03
VARS2-205ENST00000469358 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.86□□□□□ -0.03
VARS2-205ENST00000469358 ISY1Q9ULR0 285 aaKnown RBP14.86□□□□□ -0.03
VARS2-205ENST00000469358 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
VARS2-205ENST00000469358 CDK12Q9NYV4 1490 aaPredicted RBP14.85□□□□□ -0.03
VARS2-205ENST00000469358 CYP2E1P05181 493 aaPredicted RBP14.85□□□□□ -0.03
VARS2-205ENST00000469358 NEK4P51957 841 aa14.85□□□□□ -0.03
VARS2-205ENST00000469358 RPAP2Q8IXW5 612 aaPredicted RBP14.85□□□□□ -0.03
VARS2-205ENST00000469358 PALD1Q9ULE6 856 aa14.85□□□□□ -0.03
VARS2-205ENST00000469358 HSP90AA2PQ14568 343 aaPredicted RBP14.84□□□□□ -0.03
VARS2-205ENST00000469358 RNF214Q8ND24 703 aa14.84□□□□□ -0.03
VARS2-205ENST00000469358 A2ML1A8K2U0 1454 aa14.84□□□□□ -0.03
VARS2-205ENST00000469358 NUCB2P80303 420 aa14.83□□□□□ -0.04
VARS2-205ENST00000469358 CCDC173Q0VFZ6 552 aa14.83□□□□□ -0.04
VARS2-205ENST00000469358 SYCE3A1L190 88 aa14.83□□□□□ -0.04
VARS2-205ENST00000469358 ST18O60284 1047 aa14.83□□□□□ -0.04
VARS2-205ENST00000469358 PDE1AP54750 535 aa14.83□□□□□ -0.04
VARS2-205ENST00000469358 CLEC17AQ6ZS10 378 aa14.83□□□□□ -0.04
VARS2-205ENST00000469358 MPNDQ8N594 471 aa14.83□□□□□ -0.04
VARS2-205ENST00000469358 TMEM63CQ9P1W3 806 aa14.83□□□□□ -0.04
VARS2-205ENST00000469358 RILPL2Q969X0 211 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 RICTORQ6R327 1708 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 FAM69CQ0P6D2 419 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 CASC1Q6TDU7 716 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 KIAA1211Q6ZU35 1233 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 PPP1R9BQ96SB3 815 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 UPF3BQ9BZI7 483 aaKnown RBP14.82□□□□□ -0.04
VARS2-205ENST00000469358 GDPD2Q9HCC8 539 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 ERC2O15083 957 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 MTHFSDQ2M296 383 aaKnown RBP14.82□□□□□ -0.04
VARS2-205ENST00000469358 AATKQ6ZMQ8 1374 aa14.82□□□□□ -0.04
VARS2-205ENST00000469358 PNMA6EA0A0J9YXQ4 647 aa14.81□□□□□ -0.04
VARS2-205ENST00000469358 ANP32BQ92688 251 aaKnown RBP14.81□□□□□ -0.04
VARS2-205ENST00000469358 ACEP12821 1306 aa14.81□□□□□ -0.04
VARS2-205ENST00000469358 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
VARS2-205ENST00000469358 UNC5CLQ8IV45 518 aa14.81□□□□□ -0.04
VARS2-205ENST00000469358 TMX3Q96JJ7 454 aa14.81□□□□□ -0.04
VARS2-205ENST00000469358 MAP4K4O95819 1239 aaPredicted RBP14.8□□□□□ -0.04
VARS2-205ENST00000469358 LARP6Q9BRS8 491 aaKnown RBP14.8□□□□□ -0.04
VARS2-205ENST00000469358 MAP3K19Q56UN5 1328 aa14.8□□□□□ -0.04
VARS2-205ENST00000469358 TTC21BQ7Z4L5 1316 aa14.8□□□□□ -0.04
VARS2-205ENST00000469358 TRIM6-TRIM34B2RNG4 842 aa14.8□□□□□ -0.04
VARS2-205ENST00000469358 ZSCAN30Q86W11 494 aa14.8□□□□□ -0.04
VARS2-205ENST00000469358 IL25Q9H293 177 aa14.8□□□□□ -0.04
VARS2-205ENST00000469358 REC8O95072 547 aa14.8□□□□□ -0.04
VARS2-205ENST00000469358 PTMSP20962 102 aa14.8□□□□□ -0.04
VARS2-205ENST00000469358 XPCQ01831 940 aaPredicted RBP14.8□□□□□ -0.04
VARS2-205ENST00000469358 ANO2Q9NQ90 1003 aa14.8□□□□□ -0.04
VARS2-205ENST00000469358 ZNF445P59923 1031 aa14.79□□□□□ -0.04
VARS2-205ENST00000469358 NUTM2GQ5VZR2 741 aa14.79□□□□□ -0.04
VARS2-205ENST00000469358 IL1RAPL2Q9NP60 686 aa14.79□□□□□ -0.04
VARS2-205ENST00000469358 RBM10P98175 930 aaKnown RBP14.79□□□□□ -0.04
VARS2-205ENST00000469358 MSNP26038 577 aaKnown RBP14.78□□□□□ -0.04
VARS2-205ENST00000469358 VSIG10Q8N0Z9 540 aa14.78□□□□□ -0.04
VARS2-205ENST00000469358 FKBP5Q13451 457 aaPredicted RBP14.78□□□□□ -0.04
VARS2-205ENST00000469358 ROBO2Q9HCK4 1378 aa14.77□□□□□ -0.04
VARS2-205ENST00000469358 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.04
VARS2-205ENST00000469358 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.04
VARS2-205ENST00000469358 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.04
VARS2-205ENST00000469358 PTPRCP08575 1304 aa14.77□□□□□ -0.05
VARS2-205ENST00000469358 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.77□□□□□ -0.05
VARS2-205ENST00000469358 RTF1Q92541 710 aaKnown RBP14.76□□□□□ -0.05
VARS2-205ENST00000469358 SLC26A8Q96RN1 970 aa14.76□□□□□ -0.05
VARS2-205ENST00000469358 KIF24Q5T7B8 1368 aa14.76□□□□□ -0.05
VARS2-205ENST00000469358 ARID3AQ99856 593 aa14.76□□□□□ -0.05
VARS2-205ENST00000469358 ESYT1Q9BSJ8 1104 aa14.76□□□□□ -0.05
VARS2-205ENST00000469358 R3HCC1Q9Y3T6 440 aaKnown RBP14.76□□□□□ -0.05
VARS2-205ENST00000469358 CRB1P82279 1406 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms