RNA–Protein interactions for RNA: ENST00000468674.5

PKD1-204, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 490 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-204ENST00000468674 NUDCQ9Y266 331 aa23.35■■□□□ 1.33
PKD1-204ENST00000468674 KDRP35968 1356 aa23.35■■□□□ 1.33
PKD1-204ENST00000468674 SHANK3Q9BYB0 1731 aa23.34■■□□□ 1.33
PKD1-204ENST00000468674 U2AF1L5P0DN76 240 aaPredicted RBP23.32■■□□□ 1.32
PKD1-204ENST00000468674 U2AF1Q01081 240 aaKnown RBP eCLIP23.32■■□□□ 1.32
PKD1-204ENST00000468674 CCDC184Q52MB2 194 aa23.32■■□□□ 1.32
PKD1-204ENST00000468674 MARCH10Q8NA82 808 aaPredicted RBP23.32■■□□□ 1.32
PKD1-204ENST00000468674 ZCRB1Q8TBF4 217 aaKnown RBP23.32■■□□□ 1.32
PKD1-204ENST00000468674 PKD1L3Q7Z443 1732 aa23.32■■□□□ 1.32
PKD1-204ENST00000468674 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
PKD1-204ENST00000468674 DDX54Q8TDD1 881 aaKnown RBP23.31■■□□□ 1.32
PKD1-204ENST00000468674 RSPH6AQ9H0K4 717 aa23.27■■□□□ 1.32
PKD1-204ENST00000468674 SPG7Q9UQ90 795 aa23.27■■□□□ 1.32
PKD1-204ENST00000468674 PCDH11XQ9BZA7 1347 aa23.26■■□□□ 1.31
PKD1-204ENST00000468674 PCDH11YQ9BZA8 1340 aa23.26■■□□□ 1.31
PKD1-204ENST00000468674 PRKAR2BP31323 418 aa23.25■■□□□ 1.31
PKD1-204ENST00000468674 CYP27B1O15528 508 aa23.24■■□□□ 1.31
PKD1-204ENST00000468674 PLEKHO1Q53GL0 409 aaPredicted RBP23.24■■□□□ 1.31
PKD1-204ENST00000468674 MRS2Q9HD23 443 aa23.24■■□□□ 1.31
PKD1-204ENST00000468674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.24■■□□□ 1.31
PKD1-204ENST00000468674 PLEKHG2Q9H7P9 1386 aa23.24■■□□□ 1.31
PKD1-204ENST00000468674 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
PKD1-204ENST00000468674 FCHSD2O94868 740 aa23.22■■□□□ 1.31
PKD1-204ENST00000468674 WDR43Q15061 677 aaKnown RBP eCLIP23.22■■□□□ 1.31
PKD1-204ENST00000468674 AMOTQ4VCS5 1084 aa23.21■■□□□ 1.31
PKD1-204ENST00000468674 ZNF530Q6P9A1 599 aaPredicted RBP23.21■■□□□ 1.31
PKD1-204ENST00000468674 PHACTR3Q96KR7 559 aa23.2■■□□□ 1.3
PKD1-204ENST00000468674 PHKG2P15735 406 aa23.19■■□□□ 1.3
PKD1-204ENST00000468674 MTHFSDQ2M296 383 aaKnown RBP23.19■■□□□ 1.3
PKD1-204ENST00000468674 ACSBG1Q96GR2 724 aa23.19■■□□□ 1.3
PKD1-204ENST00000468674 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
PKD1-204ENST00000468674 BCL9O00512 1426 aa23.18■■□□□ 1.3
PKD1-204ENST00000468674 IFNL2Q8IZJ0 200 aa23.18■■□□□ 1.3
PKD1-204ENST00000468674 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
PKD1-204ENST00000468674 SBF2Q86WG5 1849 aa23.17■■□□□ 1.3
PKD1-204ENST00000468674 TRIM37O94972 964 aa23.17■■□□□ 1.3
PKD1-204ENST00000468674 UPF1Q92900 1129 aaKnown RBP eCLIP23.17■■□□□ 1.3
PKD1-204ENST00000468674 TOGARAM1Q9Y4F4 1720 aa23.16■■□□□ 1.3
PKD1-204ENST00000468674 C1orf141Q5JVX7 400 aa23.16■■□□□ 1.3
PKD1-204ENST00000468674 PTF1AQ7RTS3 328 aa23.16■■□□□ 1.3
PKD1-204ENST00000468674 PLEKHF1Q96S99 279 aa23.16■■□□□ 1.3
PKD1-204ENST00000468674 KCNQ2O43526 872 aa23.15■■□□□ 1.3
PKD1-204ENST00000468674 CCDC146Q8IYE0 955 aa23.15■■□□□ 1.3
PKD1-204ENST00000468674 MIER1Q8N108 512 aa23.15■■□□□ 1.3
PKD1-204ENST00000468674 NHSQ6T4R5 1651 aa23.15■■□□□ 1.3
PKD1-204ENST00000468674 TNS1Q9HBL0 1735 aaKnown RBP23.14■■□□□ 1.3
PKD1-204ENST00000468674 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.29
PKD1-204ENST00000468674 PNISRQ8TF01 805 aaKnown RBP23.14■■□□□ 1.29
PKD1-204ENST00000468674 SOCS7O14512 581 aa23.13■■□□□ 1.29
PKD1-204ENST00000468674 KDM6AO15550 1401 aaPredicted RBP23.13■■□□□ 1.29
PKD1-204ENST00000468674 PRIM1P49642 420 aaKnown RBP23.12■■□□□ 1.29
PKD1-204ENST00000468674 AKAP4Q5JQC9 854 aa23.12■■□□□ 1.29
PKD1-204ENST00000468674 GAS2L2Q8NHY3 880 aa23.12■■□□□ 1.29
PKD1-204ENST00000468674 SYTL4Q96C24 671 aaPredicted RBP23.12■■□□□ 1.29
PKD1-204ENST00000468674 PNNQ9H307 717 aaKnown RBP23.12■■□□□ 1.29
PKD1-204ENST00000468674 MAPK8IP3Q9UPT6 1336 aa23.11■■□□□ 1.29
PKD1-204ENST00000468674 NEFMP07197 916 aa23.11■■□□□ 1.29
PKD1-204ENST00000468674 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
PKD1-204ENST00000468674 EP400Q96L91 3159 aa23.1■■□□□ 1.29
PKD1-204ENST00000468674 HSP90AB1P08238 724 aaKnown RBP23.1■■□□□ 1.29
PKD1-204ENST00000468674 MAP3K5Q99683 1374 aa23.1■■□□□ 1.29
PKD1-204ENST00000468674 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
PKD1-204ENST00000468674 BCL11BQ9C0K0 894 aaPredicted RBP23.09■■□□□ 1.29
PKD1-204ENST00000468674 SF3B2Q13435 895 aaKnown RBP23.08■■□□□ 1.29
PKD1-204ENST00000468674 RUNDC1Q96C34 613 aa23.08■■□□□ 1.29
PKD1-204ENST00000468674 CCER2I3L3R5 266 aa23.07■■□□□ 1.28
PKD1-204ENST00000468674 APBA3O96018 575 aa23.07■■□□□ 1.28
PKD1-204ENST00000468674 LGR6Q9HBX8 967 aa23.07■■□□□ 1.28
PKD1-204ENST00000468674 BTAF1O14981 1849 aa23.07■■□□□ 1.28
PKD1-204ENST00000468674 ITGB4P16144 1822 aa23.07■■□□□ 1.28
PKD1-204ENST00000468674 GNAT3A8MTJ3 354 aa23.06■■□□□ 1.28
PKD1-204ENST00000468674 CCDC125Q86Z20 511 aa23.06■■□□□ 1.28
PKD1-204ENST00000468674 FAM9BQ8IZU0 186 aa23.06■■□□□ 1.28
PKD1-204ENST00000468674 SCN11AQ9UI33 1791 aa23.06■■□□□ 1.28
PKD1-204ENST00000468674 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
PKD1-204ENST00000468674 RNMTO43148 476 aaKnown RBP23.05■■□□□ 1.28
PKD1-204ENST00000468674 NFE2L2Q16236 605 aa23.05■■□□□ 1.28
PKD1-204ENST00000468674 DEFB132Q7Z7B7 95 aa23.05■■□□□ 1.28
PKD1-204ENST00000468674 VIRMAQ69YN4 1812 aaKnown RBP23.04■■□□□ 1.28
PKD1-204ENST00000468674 RRP7AQ9Y3A4 280 aaKnown RBP23.04■■□□□ 1.28
PKD1-204ENST00000468674 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
PKD1-204ENST00000468674 TMOD3Q9NYL9 352 aa23.03■■□□□ 1.28
PKD1-204ENST00000468674 KAT6BQ8WYB5 2073 aa23.02■■□□□ 1.28
PKD1-204ENST00000468674 ERVV-2B6SEH9 535 aa23.02■■□□□ 1.28
PKD1-204ENST00000468674 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
PKD1-204ENST00000468674 CABP4P57796 275 aa23.02■■□□□ 1.28
PKD1-204ENST00000468674 IL17REQ8NFR9 667 aa23.02■■□□□ 1.28
PKD1-204ENST00000468674 PIGBQ92521 554 aa23.02■■□□□ 1.28
PKD1-204ENST00000468674 MRC1P22897 1456 aa23.01■■□□□ 1.27
PKD1-204ENST00000468674 SENP3-EIF4A1A0A087X0R7 540 aa23.01■■□□□ 1.27
PKD1-204ENST00000468674 BAG6P46379 1132 aa23.01■■□□□ 1.27
PKD1-204ENST00000468674 EN1Q05925 392 aaPredicted RBP23.01■■□□□ 1.27
PKD1-204ENST00000468674 DCTN1Q14203 1278 aa23.01■■□□□ 1.27
PKD1-204ENST00000468674 NEUROD2Q15784 382 aa23.01■■□□□ 1.27
PKD1-204ENST00000468674 MCM10Q7L590 875 aa23.01■■□□□ 1.27
PKD1-204ENST00000468674 APAF1O14727 1248 aa23■■□□□ 1.27
PKD1-204ENST00000468674 RIPK4P57078 832 aa23■■□□□ 1.27
PKD1-204ENST00000468674 RTF1Q92541 710 aaKnown RBP23■■□□□ 1.27
PKD1-204ENST00000468674 NFATC2IPQ8NCF5 419 aa22.99■■□□□ 1.27
PKD1-204ENST00000468674 EZH2Q15910 746 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms