RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
PRPF38B-204ENST00000467302 KIF1AQ12756 1690 aa18.46■□□□□ 0.55
PRPF38B-204ENST00000467302 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
PRPF38B-204ENST00000467302 VAMP4O75379 141 aa18.46■□□□□ 0.55
PRPF38B-204ENST00000467302 AMPHP49418 695 aa18.46■□□□□ 0.55
PRPF38B-204ENST00000467302 L1TD1Q5T7N2 865 aaKnown RBP18.46■□□□□ 0.55
PRPF38B-204ENST00000467302 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
PRPF38B-204ENST00000467302 NCOA3Q9Y6Q9 1424 aa18.46■□□□□ 0.54
PRPF38B-204ENST00000467302 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
PRPF38B-204ENST00000467302 RTL1A6NKG5 1358 aa18.45■□□□□ 0.54
PRPF38B-204ENST00000467302 LNPKQ9C0E8 428 aa18.45■□□□□ 0.54
PRPF38B-204ENST00000467302 ZNF853P0CG23 659 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 DDIT3P35638 169 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 ESCO1Q5FWF5 840 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 BMP2KLQ5H9B9 411 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 SNX21Q969T3 373 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 LTN1O94822 1766 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 KDRP35968 1356 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 NUTM2GQ5VZR2 741 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 HSCBQ8IWL3 235 aa18.44■□□□□ 0.54
PRPF38B-204ENST00000467302 FSD2A1L4K1 749 aa18.43■□□□□ 0.54
PRPF38B-204ENST00000467302 NFAT5O94916 1531 aa18.42■□□□□ 0.54
PRPF38B-204ENST00000467302 PROSER2Q86WR7 435 aaPredicted RBP18.42■□□□□ 0.54
PRPF38B-204ENST00000467302 GCC1Q96CN9 775 aa18.42■□□□□ 0.54
PRPF38B-204ENST00000467302 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
PRPF38B-204ENST00000467302 CHMP4BQ9H444 224 aaKnown RBP18.42■□□□□ 0.54
PRPF38B-204ENST00000467302 IGSF1Q8N6C5 1336 aa18.42■□□□□ 0.54
PRPF38B-204ENST00000467302 PSME1Q06323 249 aa18.42■□□□□ 0.54
PRPF38B-204ENST00000467302 TSPYL6Q8N831 410 aa18.42■□□□□ 0.54
PRPF38B-204ENST00000467302 PHRF1Q9P1Y6 1649 aaKnown RBP18.41■□□□□ 0.54
PRPF38B-204ENST00000467302 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
PRPF38B-204ENST00000467302 MBIPQ9NS73 344 aa18.41■□□□□ 0.54
PRPF38B-204ENST00000467302 ABCC4O15439 1325 aa18.41■□□□□ 0.54
PRPF38B-204ENST00000467302 HOXC9P31274 260 aa18.4■□□□□ 0.54
PRPF38B-204ENST00000467302 DCTN1Q14203 1278 aa18.4■□□□□ 0.54
PRPF38B-204ENST00000467302 TRPM3Q9HCF6 1732 aaPredicted RBP18.4■□□□□ 0.54
PRPF38B-204ENST00000467302 STRCP1A6NGW2 1772 aa18.39■□□□□ 0.54
PRPF38B-204ENST00000467302 SIRT2Q8IXJ6 389 aa18.39■□□□□ 0.53
PRPF38B-204ENST00000467302 DCCP43146 1447 aa18.39■□□□□ 0.53
PRPF38B-204ENST00000467302 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
PRPF38B-204ENST00000467302 C1orf167Q5SNV9 1468 aa18.39■□□□□ 0.53
PRPF38B-204ENST00000467302 TRAK2O60296 914 aa18.38■□□□□ 0.53
PRPF38B-204ENST00000467302 EYA1Q99502 592 aa18.38■□□□□ 0.53
PRPF38B-204ENST00000467302 KIF2CQ99661 725 aa18.38■□□□□ 0.53
PRPF38B-204ENST00000467302 C19orf44Q9H6X5 657 aa18.38■□□□□ 0.53
PRPF38B-204ENST00000467302 SLIT3O75094 1523 aa18.38■□□□□ 0.53
PRPF38B-204ENST00000467302 GOLGA6L3A6NEY3 463 aa18.37■□□□□ 0.53
PRPF38B-204ENST00000467302 XRCC6P12956 609 aaKnown RBP eCLIP18.37■□□□□ 0.531e-12■□□□□ 10.1
PRPF38B-204ENST00000467302 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
PRPF38B-204ENST00000467302 C1orf115Q9H7X2 142 aa18.37■□□□□ 0.53
PRPF38B-204ENST00000467302 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
PRPF38B-204ENST00000467302 TWISTNBQ3B726 338 aaPredicted RBP18.35■□□□□ 0.53
PRPF38B-204ENST00000467302 DDX11L8A8MPP1 907 aa18.35■□□□□ 0.53
PRPF38B-204ENST00000467302 ELL2O00472 640 aaPredicted RBP18.35■□□□□ 0.53
PRPF38B-204ENST00000467302 CIZ1Q9ULV3 898 aaPredicted RBP18.35■□□□□ 0.53
PRPF38B-204ENST00000467302 TBC1D9Q6ZT07 1266 aa18.34■□□□□ 0.53
PRPF38B-204ENST00000467302 MCM10Q7L590 875 aa18.34■□□□□ 0.53
PRPF38B-204ENST00000467302 C8orf58Q8NAV2 365 aa18.34■□□□□ 0.53
PRPF38B-204ENST00000467302 GAS2L2Q8NHY3 880 aa18.34■□□□□ 0.53
PRPF38B-204ENST00000467302 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.34■□□□□ 0.53
PRPF38B-204ENST00000467302 TMEM94Q12767 1356 aa18.34■□□□□ 0.53
PRPF38B-204ENST00000467302 MST1RQ04912 1400 aa18.34■□□□□ 0.53
PRPF38B-204ENST00000467302 MTHFSDQ2M296 383 aaKnown RBP18.33■□□□□ 0.53
PRPF38B-204ENST00000467302 GZF1Q9H116 711 aaPredicted RBP18.33■□□□□ 0.53
PRPF38B-204ENST00000467302 LRRC37A3O60309 1634 aa18.33■□□□□ 0.53
PRPF38B-204ENST00000467302 CHL1O00533 1208 aa18.32■□□□□ 0.52
PRPF38B-204ENST00000467302 FOXO3O43524 673 aa18.32■□□□□ 0.52
PRPF38B-204ENST00000467302 IP6K1Q92551 441 aa18.32■□□□□ 0.52
PRPF38B-204ENST00000467302 API5Q9BZZ5 524 aaKnown RBP18.32■□□□□ 0.52
PRPF38B-204ENST00000467302 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
PRPF38B-204ENST00000467302 CRB1P82279 1406 aa18.31■□□□□ 0.52
PRPF38B-204ENST00000467302 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
PRPF38B-204ENST00000467302 ATF3P18847 181 aa18.31■□□□□ 0.52
PRPF38B-204ENST00000467302 LTV1Q96GA3 475 aaPredicted RBP18.31■□□□□ 0.52
PRPF38B-204ENST00000467302 RRAGDQ9NQL2 400 aaPredicted RBP18.31■□□□□ 0.52
PRPF38B-204ENST00000467302 HAP1P54257 671 aaPredicted RBP18.3■□□□□ 0.52
PRPF38B-204ENST00000467302 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
PRPF38B-204ENST00000467302 TNPO1Q92973 898 aaKnown RBP18.3■□□□□ 0.52
PRPF38B-204ENST00000467302 LMTK3Q96Q04 1460 aa18.3■□□□□ 0.52
PRPF38B-204ENST00000467302 CD2BP2O95400 341 aaKnown RBP18.3■□□□□ 0.52
PRPF38B-204ENST00000467302 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
PRPF38B-204ENST00000467302 KIAA0232Q92628 1395 aa18.29■□□□□ 0.52
PRPF38B-204ENST00000467302 HTATSF1O43719 755 aaKnown RBP18.29■□□□□ 0.52
PRPF38B-204ENST00000467302 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
PRPF38B-204ENST00000467302 PANK2Q9BZ23 570 aa18.28■□□□□ 0.52
PRPF38B-204ENST00000467302 MRE11P49959 708 aa18.28■□□□□ 0.52
PRPF38B-204ENST00000467302 HSPA2P54652 639 aa18.28■□□□□ 0.52
PRPF38B-204ENST00000467302 GSPT1P15170 499 aaKnown RBP18.27■□□□□ 0.52
PRPF38B-204ENST00000467302 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
PRPF38B-204ENST00000467302 DCTPP1Q9H773 170 aa18.27■□□□□ 0.52
PRPF38B-204ENST00000467302 ISY1Q9ULR0 285 aaKnown RBP18.27■□□□□ 0.52
PRPF38B-204ENST00000467302 STRCQ7RTU9 1775 aa18.27■□□□□ 0.52
PRPF38B-204ENST00000467302 K7ELQ4 463 aaPredicted RBP18.27■□□□□ 0.51
PRPF38B-204ENST00000467302 CDC45O75419 566 aa18.27■□□□□ 0.51
PRPF38B-204ENST00000467302 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.51
PRPF38B-204ENST00000467302 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.51
PRPF38B-204ENST00000467302 XIRP1Q702N8 1843 aaKnown RBP18.26■□□□□ 0.51
PRPF38B-204ENST00000467302 GCP02774 474 aa18.26■□□□□ 0.51
PRPF38B-204ENST00000467302 CADPS2Q86UW7 1296 aa18.26■□□□□ 0.51
PRPF38B-204ENST00000467302 ARXQ96QS3 562 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms