RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 HOXC9P31274 260 aa17.35■□□□□ 0.37
UBR4-211ENST00000467272 GPR162Q16538 588 aa17.34■□□□□ 0.37
UBR4-211ENST00000467272 FBLN1P23142 703 aa17.33■□□□□ 0.36
UBR4-211ENST00000467272 POLD1P28340 1107 aa17.33■□□□□ 0.36
UBR4-211ENST00000467272 TFCP2L1Q9NZI6 479 aa17.33■□□□□ 0.36
UBR4-211ENST00000467272 SENP3-EIF4A1A0A087X0R7 540 aa17.32■□□□□ 0.36
UBR4-211ENST00000467272 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
UBR4-211ENST00000467272 DOT1LQ8TEK3 1739 aa17.32■□□□□ 0.36
UBR4-211ENST00000467272 RTL1A6NKG5 1358 aa17.31■□□□□ 0.36
UBR4-211ENST00000467272 YBX3P16989 372 aaKnown RBP eCLIP17.31■□□□□ 0.369e-9■□□□□ 9.2
UBR4-211ENST00000467272 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
UBR4-211ENST00000467272 NBPF6Q5VWK0 638 aa17.3■□□□□ 0.36
UBR4-211ENST00000467272 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
UBR4-211ENST00000467272 NBPF4Q96M43 638 aa17.3■□□□□ 0.36
UBR4-211ENST00000467272 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
UBR4-211ENST00000467272 COG3Q96JB2 828 aa17.29■□□□□ 0.36
UBR4-211ENST00000467272 CCNL1Q9UK58 526 aaPredicted RBP17.29■□□□□ 0.36
UBR4-211ENST00000467272 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
UBR4-211ENST00000467272 SYTL4Q96C24 671 aaPredicted RBP17.27■□□□□ 0.36
UBR4-211ENST00000467272 RGPD2P0DJD1 1756 aa17.27■□□□□ 0.35
UBR4-211ENST00000467272 ST20-MTHFSA0A0A6YYL1 179 aa17.26■□□□□ 0.35
UBR4-211ENST00000467272 FYB1O15117 783 aa17.26■□□□□ 0.35
UBR4-211ENST00000467272 GRIN3BO60391 1043 aa17.26■□□□□ 0.35
UBR4-211ENST00000467272 AMPHP49418 695 aa17.25■□□□□ 0.35
UBR4-211ENST00000467272 ADCY9O60503 1353 aa17.25■□□□□ 0.35
UBR4-211ENST00000467272 USP47Q96K76 1375 aa17.25■□□□□ 0.35
UBR4-211ENST00000467272 NCAPD2Q15021 1401 aa17.24■□□□□ 0.35
UBR4-211ENST00000467272 CD2APQ9Y5K6 639 aa17.24■□□□□ 0.35
UBR4-211ENST00000467272 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
UBR4-211ENST00000467272 AMIGO3Q86WK7 504 aa17.23■□□□□ 0.35
UBR4-211ENST00000467272 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
UBR4-211ENST00000467272 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
UBR4-211ENST00000467272 INSRP06213 1382 aa17.23■□□□□ 0.35
UBR4-211ENST00000467272 SLC24A1O60721 1099 aa17.22■□□□□ 0.35
UBR4-211ENST00000467272 KIF24Q5T7B8 1368 aa17.22■□□□□ 0.35
UBR4-211ENST00000467272 C5P01031 1676 aa17.22■□□□□ 0.35
UBR4-211ENST00000467272 CYP27B1O15528 508 aa17.21■□□□□ 0.35
UBR4-211ENST00000467272 USHBP1Q8N6Y0 703 aa17.21■□□□□ 0.35
UBR4-211ENST00000467272 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
UBR4-211ENST00000467272 ATP10DQ9P241 1426 aa17.21■□□□□ 0.34
UBR4-211ENST00000467272 PALLDQ8WX93 1383 aa17.2■□□□□ 0.34
UBR4-211ENST00000467272 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
UBR4-211ENST00000467272 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
UBR4-211ENST00000467272 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
UBR4-211ENST00000467272 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
UBR4-211ENST00000467272 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
UBR4-211ENST00000467272 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
UBR4-211ENST00000467272 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
UBR4-211ENST00000467272 FLAD1Q8NFF5 587 aa17.19■□□□□ 0.34
UBR4-211ENST00000467272 TONSLQ96HA7 1378 aa17.18■□□□□ 0.34
UBR4-211ENST00000467272 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
UBR4-211ENST00000467272 GGNBP2Q9H3C7 697 aa17.18■□□□□ 0.34
UBR4-211ENST00000467272 TAF1LQ8IZX4 1826 aa17.18■□□□□ 0.34
UBR4-211ENST00000467272 FLT4P35916 1363 aa17.17■□□□□ 0.34
UBR4-211ENST00000467272 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
UBR4-211ENST00000467272 HMGB2P26583 209 aaKnown RBP17.17■□□□□ 0.34
UBR4-211ENST00000467272 C4BP0C0L5 1744 aa17.16■□□□□ 0.34
UBR4-211ENST00000467272 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
UBR4-211ENST00000467272 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
UBR4-211ENST00000467272 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
UBR4-211ENST00000467272 MSH5O43196 834 aa17.15■□□□□ 0.34
UBR4-211ENST00000467272 PIGBQ92521 554 aa17.15■□□□□ 0.34
UBR4-211ENST00000467272 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
UBR4-211ENST00000467272 MPRIPQ6WCQ1 1025 aa17.14■□□□□ 0.33
UBR4-211ENST00000467272 SMARCC1Q92922 1105 aaPredicted RBP17.13■□□□□ 0.33
UBR4-211ENST00000467272 UBR3Q6ZT12 1888 aa17.13■□□□□ 0.33
UBR4-211ENST00000467272 CICQ96RK0 1608 aaPredicted RBP17.12■□□□□ 0.33
UBR4-211ENST00000467272 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
UBR4-211ENST00000467272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.11■□□□□ 0.33
UBR4-211ENST00000467272 SSFA2P28290 1259 aa17.11■□□□□ 0.33
UBR4-211ENST00000467272 TMF1P82094 1093 aa17.11■□□□□ 0.33
UBR4-211ENST00000467272 SMIM5Q71RC9 77 aa17.11■□□□□ 0.33
UBR4-211ENST00000467272 LINC00116Q8NCU8 138 aa17.11■□□□□ 0.33
UBR4-211ENST00000467272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.337e-10■■■□□ 15.7
UBR4-211ENST00000467272 EMILIN1Q9Y6C2 1016 aa17.11■□□□□ 0.33
UBR4-211ENST00000467272 ITGB4P16144 1822 aa17.11■□□□□ 0.33
UBR4-211ENST00000467272 IGSF1Q8N6C5 1336 aa17.1■□□□□ 0.33
UBR4-211ENST00000467272 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
UBR4-211ENST00000467272 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
UBR4-211ENST00000467272 HSPA6P17066 643 aa17.09■□□□□ 0.33
UBR4-211ENST00000467272 SIK1P57059 783 aa17.09■□□□□ 0.33
UBR4-211ENST00000467272 ITPK1Q13572 414 aa17.09■□□□□ 0.33
UBR4-211ENST00000467272 GPBP1L1Q9HC44 474 aaPredicted RBP17.09■□□□□ 0.33
UBR4-211ENST00000467272 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
UBR4-211ENST00000467272 PLEKHG2Q9H7P9 1386 aa17.08■□□□□ 0.32
UBR4-211ENST00000467272 AK7Q96M32 723 aa17.08■□□□□ 0.32
UBR4-211ENST00000467272 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
UBR4-211ENST00000467272 KIF3CO14782 793 aa17.07■□□□□ 0.32
UBR4-211ENST00000467272 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
UBR4-211ENST00000467272 KDRP35968 1356 aa17.06■□□□□ 0.32
UBR4-211ENST00000467272 EYA1Q99502 592 aa17.06■□□□□ 0.32
UBR4-211ENST00000467272 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
UBR4-211ENST00000467272 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
UBR4-211ENST00000467272 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
UBR4-211ENST00000467272 PHF14O94880 888 aa17.04■□□□□ 0.32
UBR4-211ENST00000467272 PHKG2P15735 406 aa17.04■□□□□ 0.32
UBR4-211ENST00000467272 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
UBR4-211ENST00000467272 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
UBR4-211ENST00000467272 KIF13BQ9NQT8 1826 aa17.04■□□□□ 0.32
UBR4-211ENST00000467272 CDCA8Q53HL2 280 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms