RNA–Protein interactions for RNA: ENST00000467078.5

APBB3-206, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 1,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-206ENST00000467078 ZNF335Q9H4Z2 1342 aaPredicted RBP20.4■□□□□ 0.86
APBB3-206ENST00000467078 MCM10Q7L590 875 aa20.4■□□□□ 0.86
APBB3-206ENST00000467078 BRPF1P55201 1214 aaPredicted RBP20.39■□□□□ 0.86
APBB3-206ENST00000467078 AAMPQ13685 434 aa20.39■□□□□ 0.86
APBB3-206ENST00000467078 CRB1P82279 1406 aa20.39■□□□□ 0.85
APBB3-206ENST00000467078 PXDNQ92626 1479 aa20.39■□□□□ 0.85
APBB3-206ENST00000467078 CHL1O00533 1208 aa20.39■□□□□ 0.85
APBB3-206ENST00000467078 NPM2Q86SE8 214 aaKnown RBP20.39■□□□□ 0.85
APBB3-206ENST00000467078 DDX17Q92841 729 aaKnown RBP20.39■□□□□ 0.85
APBB3-206ENST00000467078 ZBTB7CA1YPR0 619 aa20.38■□□□□ 0.85
APBB3-206ENST00000467078 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
APBB3-206ENST00000467078 RTL5Q5HYW3 569 aaPredicted RBP20.38■□□□□ 0.85
APBB3-206ENST00000467078 TSPYL6Q8N831 410 aa20.38■□□□□ 0.85
APBB3-206ENST00000467078 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
APBB3-206ENST00000467078 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
APBB3-206ENST00000467078 DZIP1LQ8IYY4 767 aaKnown RBP20.37■□□□□ 0.85
APBB3-206ENST00000467078 NBPF6Q5VWK0 638 aa20.37■□□□□ 0.85
APBB3-206ENST00000467078 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
APBB3-206ENST00000467078 CLUAP1Q96AJ1 413 aa20.37■□□□□ 0.85
APBB3-206ENST00000467078 NBPF4Q96M43 638 aa20.37■□□□□ 0.85
APBB3-206ENST00000467078 CRYBG1Q9Y4K1 1723 aa20.37■□□□□ 0.85
APBB3-206ENST00000467078 CAMTA1Q9Y6Y1 1673 aa20.36■□□□□ 0.85
APBB3-206ENST00000467078 TNS3Q68CZ2 1445 aa20.36■□□□□ 0.85
APBB3-206ENST00000467078 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
APBB3-206ENST00000467078 ATF7IPQ6VMQ6 1270 aa20.36■□□□□ 0.85
APBB3-206ENST00000467078 C8orf58Q8NAV2 365 aa20.36■□□□□ 0.85
APBB3-206ENST00000467078 NOB1Q9ULX3 412 aaKnown RBP20.36■□□□□ 0.85
APBB3-206ENST00000467078 TRIM27P14373 513 aa20.35■□□□□ 0.85
APBB3-206ENST00000467078 USHBP1Q8N6Y0 703 aa20.35■□□□□ 0.85
APBB3-206ENST00000467078 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
APBB3-206ENST00000467078 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
APBB3-206ENST00000467078 PLEKHG5O94827 1062 aa20.35■□□□□ 0.85
APBB3-206ENST00000467078 DDRGK1Q96HY6 314 aa20.35■□□□□ 0.85
APBB3-206ENST00000467078 MVPQ14764 893 aaKnown RBP20.34■□□□□ 0.85
APBB3-206ENST00000467078 FTSJ3Q8IY81 847 aaKnown RBP20.34■□□□□ 0.85
APBB3-206ENST00000467078 COL18A1P39060 1754 aa20.33■□□□□ 0.85
APBB3-206ENST00000467078 GNAT3A8MTJ3 354 aa20.33■□□□□ 0.85
APBB3-206ENST00000467078 BRINP3Q76B58 766 aa20.33■□□□□ 0.85
APBB3-206ENST00000467078 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.85
APBB3-206ENST00000467078 KIAA0232Q92628 1395 aa20.33■□□□□ 0.84
APBB3-206ENST00000467078 ELL2O00472 640 aaPredicted RBP20.33■□□□□ 0.84
APBB3-206ENST00000467078 SPATA31A3Q5VYP0 1347 aa20.32■□□□□ 0.84
APBB3-206ENST00000467078 MAP3K5Q99683 1374 aa20.32■□□□□ 0.84
APBB3-206ENST00000467078 ANKRD24Q8TF21 1146 aa20.31■□□□□ 0.84
APBB3-206ENST00000467078 LRRC59Q96AG4 307 aaKnown RBP20.31■□□□□ 0.84
APBB3-206ENST00000467078 AXIN2Q9Y2T1 843 aa20.31■□□□□ 0.84
APBB3-206ENST00000467078 VIRMAQ69YN4 1812 aaKnown RBP20.31■□□□□ 0.84
APBB3-206ENST00000467078 SLAIN2Q9P270 581 aa20.31■□□□□ 0.84
APBB3-206ENST00000467078 ZC3H6P61129 1189 aaKnown RBP20.3■□□□□ 0.84
APBB3-206ENST00000467078 ARHGAP45Q92619 1136 aa20.3■□□□□ 0.84
APBB3-206ENST00000467078 LMO7Q8WWI1 1683 aa20.3■□□□□ 0.84
APBB3-206ENST00000467078 HAP1P54257 671 aaPredicted RBP20.29■□□□□ 0.84
APBB3-206ENST00000467078 SKAP1Q86WV1 359 aa20.29■□□□□ 0.84
APBB3-206ENST00000467078 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
APBB3-206ENST00000467078 ABCC6O95255 1503 aa20.28■□□□□ 0.84
APBB3-206ENST00000467078 IGHDP01880 384 aa20.27■□□□□ 0.84
APBB3-206ENST00000467078 IL17REQ8NFR9 667 aa20.27■□□□□ 0.84
APBB3-206ENST00000467078 DDX19BQ9UMR2 479 aa20.27■□□□□ 0.84
APBB3-206ENST00000467078 TSPYL4Q9UJ04 414 aa20.27■□□□□ 0.84
APBB3-206ENST00000467078 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
APBB3-206ENST00000467078 ERBB3P21860 1342 aa20.26■□□□□ 0.83
APBB3-206ENST00000467078 KRT24Q2M2I5 525 aa20.26■□□□□ 0.83
APBB3-206ENST00000467078 FAM161AQ3B820 660 aa20.26■□□□□ 0.83
APBB3-206ENST00000467078 TMEM57Q8N5G2 664 aa20.26■□□□□ 0.83
APBB3-206ENST00000467078 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
APBB3-206ENST00000467078 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
APBB3-206ENST00000467078 SOS2Q07890 1332 aaPredicted RBP20.25■□□□□ 0.83
APBB3-206ENST00000467078 CABLES1Q8TDN4 633 aa20.25■□□□□ 0.83
APBB3-206ENST00000467078 ITPRIPQ8IWB1 547 aa20.25■□□□□ 0.83
APBB3-206ENST00000467078 BABAM1Q9NWV8 329 aa20.25■□□□□ 0.83
APBB3-206ENST00000467078 CACNA1FO60840 1977 aa20.24■□□□□ 0.83
APBB3-206ENST00000467078 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
APBB3-206ENST00000467078 C8orf34Q49A92 452 aa20.24■□□□□ 0.83
APBB3-206ENST00000467078 PLEKHO1Q53GL0 409 aaPredicted RBP20.24■□□□□ 0.83
APBB3-206ENST00000467078 CEMIPQ8WUJ3 1361 aa20.24■□□□□ 0.83
APBB3-206ENST00000467078 AMOTQ4VCS5 1084 aa20.23■□□□□ 0.83
APBB3-206ENST00000467078 CPDO75976 1380 aa20.23■□□□□ 0.83
APBB3-206ENST00000467078 TAF7Q15545 349 aaPredicted RBP20.23■□□□□ 0.83
APBB3-206ENST00000467078 AKAP4Q5JQC9 854 aa20.21■□□□□ 0.83
APBB3-206ENST00000467078 ABCC4O15439 1325 aa20.21■□□□□ 0.83
APBB3-206ENST00000467078 ZNF530Q6P9A1 599 aaPredicted RBP20.21■□□□□ 0.83
APBB3-206ENST00000467078 API5Q9BZZ5 524 aaKnown RBP20.21■□□□□ 0.83
APBB3-206ENST00000467078 KDM3BQ7LBC6 1761 aa20.21■□□□□ 0.83
APBB3-206ENST00000467078 ABCA3Q99758 1704 aa20.2■□□□□ 0.82
APBB3-206ENST00000467078 ZBTB40Q9NUA8 1239 aa20.2■□□□□ 0.82
APBB3-206ENST00000467078 RWDD1Q9H446 243 aaPredicted RBP20.19■□□□□ 0.82
APBB3-206ENST00000467078 SOS1Q07889 1333 aaPredicted RBP20.18■□□□□ 0.82
APBB3-206ENST00000467078 CHRNA2Q15822 529 aa20.17■□□□□ 0.82
APBB3-206ENST00000467078 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
APBB3-206ENST00000467078 ADAMTS7Q9UKP4 1686 aa20.17■□□□□ 0.82
APBB3-206ENST00000467078 OVOS2A0A0G2JMS6 1433 aa20.17■□□□□ 0.82
APBB3-206ENST00000467078 SIPA1L3O60292 1781 aaPredicted RBP20.16■□□□□ 0.82
APBB3-206ENST00000467078 CHMP4BQ9H444 224 aaKnown RBP20.16■□□□□ 0.82
APBB3-206ENST00000467078 NLRP2Q9NX02 1062 aa20.16■□□□□ 0.82
APBB3-206ENST00000467078 ZBTB7BO15156 539 aaPredicted RBP20.15■□□□□ 0.82
APBB3-206ENST00000467078 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
APBB3-206ENST00000467078 RGS12O14924 1447 aa20.15■□□□□ 0.82
APBB3-206ENST00000467078 PTPRCP08575 1304 aa20.15■□□□□ 0.82
APBB3-206ENST00000467078 HDAC1Q13547 482 aaPredicted RBP20.14■□□□□ 0.81
APBB3-206ENST00000467078 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms