RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-213ENST00000466707 MTFR1LQ9H019 292 aa35.48■■■■□ 3.27
ABCA2-213ENST00000466707 QSER1Q2KHR3 1735 aa35.48■■■■□ 3.27
ABCA2-213ENST00000466707 CDCA8Q53HL2 280 aa35.47■■■■□ 3.27
ABCA2-213ENST00000466707 SGIP1Q9BQI5 828 aa35.47■■■■□ 3.27
ABCA2-213ENST00000466707 CARD14Q9BXL6 1004 aa35.47■■■■□ 3.27
ABCA2-213ENST00000466707 NSD3Q9BZ95 1437 aa35.46■■■■□ 3.27
ABCA2-213ENST00000466707 PRIM1P49642 420 aaKnown RBP35.45■■■■□ 3.27
ABCA2-213ENST00000466707 SYTL4Q96C24 671 aaPredicted RBP35.45■■■■□ 3.27
ABCA2-213ENST00000466707 SMG6Q86US8 1419 aaKnown RBP35.45■■■■□ 3.27
ABCA2-213ENST00000466707 INSRP06213 1382 aa35.43■■■■□ 3.26
ABCA2-213ENST00000466707 HSP90AB2PQ58FF8 381 aa35.43■■■■□ 3.26
ABCA2-213ENST00000466707 FLT4P35916 1363 aa35.42■■■■□ 3.26
ABCA2-213ENST00000466707 YY1P25490 414 aa35.42■■■■□ 3.26
ABCA2-213ENST00000466707 AKT1S1Q96B36 256 aa35.42■■■■□ 3.26
ABCA2-213ENST00000466707 KCNQ4P56696 695 aa35.41■■■■□ 3.26
ABCA2-213ENST00000466707 ANKRD26Q9UPS8 1709 aa35.4■■■■□ 3.26
ABCA2-213ENST00000466707 SLC27A3Q5K4L6 730 aa35.4■■■■□ 3.26
ABCA2-213ENST00000466707 FHDC1Q9C0D6 1143 aaPredicted RBP35.39■■■■□ 3.26
ABCA2-213ENST00000466707 TIMELESSQ9UNS1 1208 aa35.38■■■■□ 3.25
ABCA2-213ENST00000466707 KIF24Q5T7B8 1368 aa35.38■■■■□ 3.25
ABCA2-213ENST00000466707 EMILIN1Q9Y6C2 1016 aa35.37■■■■□ 3.25
ABCA2-213ENST00000466707 CGNL1Q0VF96 1302 aa35.36■■■■□ 3.25
ABCA2-213ENST00000466707 RAPGEF4Q8WZA2 1011 aa35.36■■■■□ 3.25
ABCA2-213ENST00000466707 COL24A1Q17RW2 1714 aa35.35■■■■□ 3.25
ABCA2-213ENST00000466707 DCAF8L1A6NGE4 600 aa35.35■■■■□ 3.25
ABCA2-213ENST00000466707 SYT17Q9BSW7 474 aa35.35■■■■□ 3.25
ABCA2-213ENST00000466707 PCGF6Q9BYE7 350 aa35.35■■■■□ 3.25
ABCA2-213ENST00000466707 CLSPNQ9HAW4 1339 aa35.34■■■■□ 3.25
ABCA2-213ENST00000466707 TOGARAM1Q9Y4F4 1720 aa35.34■■■■□ 3.25
ABCA2-213ENST00000466707 PNPLA7Q6ZV29 1317 aa35.33■■■■□ 3.25
ABCA2-213ENST00000466707 PKD1L3Q7Z443 1732 aa35.33■■■■□ 3.25
ABCA2-213ENST00000466707 TATP17735 454 aaPredicted RBP35.33■■■■□ 3.25
ABCA2-213ENST00000466707 MAP2P11137 1827 aaKnown RBP35.31■■■■□ 3.24
ABCA2-213ENST00000466707 ARXQ96QS3 562 aa35.3■■■■□ 3.24
ABCA2-213ENST00000466707 NCAPD2Q15021 1401 aa35.29■■■■□ 3.24
ABCA2-213ENST00000466707 PCDH11XQ9BZA7 1347 aa35.28■■■■□ 3.24
ABCA2-213ENST00000466707 PCDH11YQ9BZA8 1340 aa35.28■■■■□ 3.24
ABCA2-213ENST00000466707 UTRNP46939 3433 aa35.28■■■■□ 3.24
ABCA2-213ENST00000466707 CCNL1Q9UK58 526 aaPredicted RBP35.27■■■■□ 3.24
ABCA2-213ENST00000466707 ITGB4P16144 1822 aa35.27■■■■□ 3.24
ABCA2-213ENST00000466707 C5P01031 1676 aa35.27■■■■□ 3.24
ABCA2-213ENST00000466707 TFCP2L1Q9NZI6 479 aa35.26■■■■□ 3.24
ABCA2-213ENST00000466707 MAP3K5Q99683 1374 aa35.25■■■■□ 3.23
ABCA2-213ENST00000466707 CYP27B1O15528 508 aa35.24■■■■□ 3.23
ABCA2-213ENST00000466707 PPM1GO15355 546 aaPredicted RBP35.23■■■■□ 3.23
ABCA2-213ENST00000466707 SLC16A10Q8TF71 515 aa35.23■■■■□ 3.23
ABCA2-213ENST00000466707 TAF1LQ8IZX4 1826 aa35.22■■■■□ 3.23
ABCA2-213ENST00000466707 POLR3GLQ9BT43 218 aa35.21■■■■□ 3.23
ABCA2-213ENST00000466707 WASHC2AQ641Q2 1341 aa35.18■■■■□ 3.22
ABCA2-213ENST00000466707 PALLDQ8WX93 1383 aa35.16■■■■□ 3.22
ABCA2-213ENST00000466707 POLKQ9UBT6 870 aa35.16■■■■□ 3.22
ABCA2-213ENST00000466707 CHD4Q14839 1912 aa35.16■■■■□ 3.22
ABCA2-213ENST00000466707 MPRIPQ6WCQ1 1025 aa35.14■■■■□ 3.22
ABCA2-213ENST00000466707 EYA1Q99502 592 aa35.14■■■■□ 3.22
ABCA2-213ENST00000466707 POLD1P28340 1107 aa35.13■■■■□ 3.21
ABCA2-213ENST00000466707 HSPA5P11021 654 aaKnown RBP35.12■■■■□ 3.21
ABCA2-213ENST00000466707 COL23A1Q86Y22 540 aaPredicted RBP35.12■■■■□ 3.21
ABCA2-213ENST00000466707 KLHL34Q8N239 644 aa35.12■■■■□ 3.21
ABCA2-213ENST00000466707 C4BP0C0L5 1744 aa35.1■■■■□ 3.21
ABCA2-213ENST00000466707 TNNT2P45379 298 aaPredicted RBP35.09■■■■□ 3.21
ABCA2-213ENST00000466707 EIF4G2P78344 907 aaKnown RBP eCLIP35.09■■■■□ 3.21
ABCA2-213ENST00000466707 MSH5O43196 834 aa35.07■■■■□ 3.2
ABCA2-213ENST00000466707 NKX1-1Q15270 411 aaPredicted RBP35.07■■■■□ 3.2
ABCA2-213ENST00000466707 EIF4A2Q14240 407 aaKnown RBP35.06■■■■□ 3.2
ABCA2-213ENST00000466707 PIGBQ92521 554 aa35.06■■■■□ 3.2
ABCA2-213ENST00000466707 SPG7Q9UQ90 795 aa35.06■■■■□ 3.2
ABCA2-213ENST00000466707 NLGN2Q8NFZ4 835 aa35.05■■■■□ 3.2
ABCA2-213ENST00000466707 UBR3Q6ZT12 1888 aa35.05■■■■□ 3.2
ABCA2-213ENST00000466707 MSL1Q68DK7 614 aa35.04■■■■□ 3.2
ABCA2-213ENST00000466707 ZNF784Q8NCA9 323 aaPredicted RBP35.02■■■■□ 3.2
ABCA2-213ENST00000466707 PANK3Q9H999 370 aa35.02■■■■□ 3.2
ABCA2-213ENST00000466707 SMARCC1Q92922 1105 aaPredicted RBP35.01■■■■□ 3.2
ABCA2-213ENST00000466707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.01■■■■□ 3.2
ABCA2-213ENST00000466707 GOLGB1Q14789 3259 aaKnown RBP35.01■■■■□ 3.19
ABCA2-213ENST00000466707 GPR162Q16538 588 aa35■■■■□ 3.19
ABCA2-213ENST00000466707 AMIGO3Q86WK7 504 aa35■■■■□ 3.19
ABCA2-213ENST00000466707 PHKG2P15735 406 aa34.99■■■■□ 3.19
ABCA2-213ENST00000466707 CCER1Q8TC90 406 aaPredicted RBP34.99■■■■□ 3.19
ABCA2-213ENST00000466707 IGSF1Q8N6C5 1336 aa34.97■■■■□ 3.19
ABCA2-213ENST00000466707 SMIM5Q71RC9 77 aa34.95■■■■□ 3.19
ABCA2-213ENST00000466707 IFNL2Q8IZJ0 200 aa34.95■■■■□ 3.19
ABCA2-213ENST00000466707 PELP1Q8IZL8 1130 aaKnown RBP34.95■■■■□ 3.19
ABCA2-213ENST00000466707 AK7Q96M32 723 aa34.94■■■■□ 3.18
ABCA2-213ENST00000466707 TMOD3Q9NYL9 352 aa34.94■■■■□ 3.18
ABCA2-213ENST00000466707 ASAP1Q9ULH1 1129 aa34.93■■■■□ 3.18
ABCA2-213ENST00000466707 LOC102724428A0A0B4J2F2 783 aa34.92■■■■□ 3.18
ABCA2-213ENST00000466707 SIK1P57059 783 aa34.92■■■■□ 3.18
ABCA2-213ENST00000466707 LINC00116Q8NCU8 138 aa34.92■■■■□ 3.18
ABCA2-213ENST00000466707 FLAD1Q8NFF5 587 aa34.92■■■■□ 3.18
ABCA2-213ENST00000466707 PLEKHG2Q9H7P9 1386 aa34.91■■■■□ 3.18
ABCA2-213ENST00000466707 PHF14O94880 888 aa34.89■■■■□ 3.18
ABCA2-213ENST00000466707 HMGB2P26583 209 aaKnown RBP34.89■■■■□ 3.18
ABCA2-213ENST00000466707 ITPK1Q13572 414 aa34.88■■■■□ 3.17
ABCA2-213ENST00000466707 YBX3P16989 372 aaKnown RBP eCLIP34.87■■■■□ 3.17
ABCA2-213ENST00000466707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.86■■■■□ 3.17
ABCA2-213ENST00000466707 ATG3Q9NT62 314 aa34.86■■■■□ 3.17
ABCA2-213ENST00000466707 KDRP35968 1356 aa34.85■■■■□ 3.17
ABCA2-213ENST00000466707 MORC1Q86VD1 984 aa34.84■■■■□ 3.17
ABCA2-213ENST00000466707 KDM6AO15550 1401 aaPredicted RBP34.83■■■■□ 3.17
ABCA2-213ENST00000466707 SSFA2P28290 1259 aa34.82■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms