RNA–Protein interactions for RNA: ENST00000465679.5

SNCG-203, Transcript of synuclein gamma, humanhuman

TSL 2

Gene SNCG, Length 641 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-203ENST00000465679 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
SNCG-203ENST00000465679 C1QTNF8P60827 252 aa18.36■□□□□ 0.53
SNCG-203ENST00000465679 SMG6Q86US8 1419 aaKnown RBP18.36■□□□□ 0.53
SNCG-203ENST00000465679 SYTL4Q96C24 671 aaPredicted RBP18.36■□□□□ 0.53
SNCG-203ENST00000465679 MAP3K5Q99683 1374 aa18.36■□□□□ 0.53
SNCG-203ENST00000465679 BTAF1O14981 1849 aa18.35■□□□□ 0.53
SNCG-203ENST00000465679 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
SNCG-203ENST00000465679 GPR162Q16538 588 aa18.34■□□□□ 0.53
SNCG-203ENST00000465679 NBPF6Q5VWK0 638 aa18.34■□□□□ 0.53
SNCG-203ENST00000465679 RAPGEF4Q8WZA2 1011 aa18.34■□□□□ 0.53
SNCG-203ENST00000465679 NBPF4Q96M43 638 aa18.34■□□□□ 0.53
SNCG-203ENST00000465679 PRIM1P49642 420 aaKnown RBP18.33■□□□□ 0.52
SNCG-203ENST00000465679 KLHL34Q8N239 644 aa18.33■□□□□ 0.52
SNCG-203ENST00000465679 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.52
SNCG-203ENST00000465679 CHD4Q14839 1912 aa18.33■□□□□ 0.52
SNCG-203ENST00000465679 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
SNCG-203ENST00000465679 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
SNCG-203ENST00000465679 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
SNCG-203ENST00000465679 HSP90AB2PQ58FF8 381 aa18.32■□□□□ 0.52
SNCG-203ENST00000465679 SLC27A3Q5K4L6 730 aa18.32■□□□□ 0.52
SNCG-203ENST00000465679 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
SNCG-203ENST00000465679 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
SNCG-203ENST00000465679 KIF20BQ96Q89 1820 aa18.32■□□□□ 0.52
SNCG-203ENST00000465679 NSD3Q9BZ95 1437 aa18.32■□□□□ 0.52
SNCG-203ENST00000465679 INSRP06213 1382 aa18.31■□□□□ 0.52
SNCG-203ENST00000465679 FLT4P35916 1363 aa18.31■□□□□ 0.52
SNCG-203ENST00000465679 MEGF6O75095 1541 aa18.31■□□□□ 0.52
SNCG-203ENST00000465679 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
SNCG-203ENST00000465679 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
SNCG-203ENST00000465679 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
SNCG-203ENST00000465679 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
SNCG-203ENST00000465679 POLD1P28340 1107 aa18.28■□□□□ 0.52
SNCG-203ENST00000465679 SLC16A10Q8TF71 515 aa18.28■□□□□ 0.52
SNCG-203ENST00000465679 EMILIN1Q9Y6C2 1016 aa18.28■□□□□ 0.52
SNCG-203ENST00000465679 PNPLA7Q6ZV29 1317 aa18.27■□□□□ 0.52
SNCG-203ENST00000465679 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
SNCG-203ENST00000465679 KCNQ4P56696 695 aa18.26■□□□□ 0.51
SNCG-203ENST00000465679 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
SNCG-203ENST00000465679 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
SNCG-203ENST00000465679 PCDH11XQ9BZA7 1347 aa18.25■□□□□ 0.51
SNCG-203ENST00000465679 PCDH11YQ9BZA8 1340 aa18.25■□□□□ 0.51
SNCG-203ENST00000465679 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
SNCG-203ENST00000465679 SHANK3Q9BYB0 1731 aa18.24■□□□□ 0.51
SNCG-203ENST00000465679 EIF4G2P78344 907 aaKnown RBP eCLIP18.24■□□□□ 0.51
SNCG-203ENST00000465679 NLGN2Q8NFZ4 835 aa18.24■□□□□ 0.51
SNCG-203ENST00000465679 CCNL1Q9UK58 526 aaPredicted RBP18.24■□□□□ 0.51
SNCG-203ENST00000465679 NSD2O96028 1365 aa18.24■□□□□ 0.51
SNCG-203ENST00000465679 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
SNCG-203ENST00000465679 GOLGB1Q14789 3259 aaKnown RBP18.21■□□□□ 0.51
SNCG-203ENST00000465679 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
SNCG-203ENST00000465679 QSER1Q2KHR3 1735 aa18.2■□□□□ 0.5
SNCG-203ENST00000465679 CYP27B1O15528 508 aa18.19■□□□□ 0.5
SNCG-203ENST00000465679 MSH5O43196 834 aa18.19■□□□□ 0.5
SNCG-203ENST00000465679 LY75O60449 1722 aa18.19■□□□□ 0.5
SNCG-203ENST00000465679 HMGB2P26583 209 aaKnown RBP18.19■□□□□ 0.5
SNCG-203ENST00000465679 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
SNCG-203ENST00000465679 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
SNCG-203ENST00000465679 POLKQ9UBT6 870 aa18.19■□□□□ 0.5
SNCG-203ENST00000465679 SPG7Q9UQ90 795 aa18.19■□□□□ 0.5
SNCG-203ENST00000465679 COL24A1Q17RW2 1714 aa18.18■□□□□ 0.5
SNCG-203ENST00000465679 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.52e-7■□□□□ 9.2
SNCG-203ENST00000465679 EYA1Q99502 592 aa18.18■□□□□ 0.5
SNCG-203ENST00000465679 MAP2P11137 1827 aaKnown RBP18.18■□□□□ 0.5
SNCG-203ENST00000465679 TUBGCP6Q96RT7 1819 aa18.18■□□□□ 0.5
SNCG-203ENST00000465679 GRIN3BO60391 1043 aa18.16■□□□□ 0.5
SNCG-203ENST00000465679 SMARCC1Q92922 1105 aaPredicted RBP18.16■□□□□ 0.5
SNCG-203ENST00000465679 PANK3Q9H999 370 aa18.16■□□□□ 0.5
SNCG-203ENST00000465679 PALLDQ8WX93 1383 aa18.16■□□□□ 0.5
SNCG-203ENST00000465679 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
SNCG-203ENST00000465679 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
SNCG-203ENST00000465679 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
SNCG-203ENST00000465679 ANKRD26Q9UPS8 1709 aa18.14■□□□□ 0.49
SNCG-203ENST00000465679 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
SNCG-203ENST00000465679 EIF4A2Q14240 407 aaKnown RBP18.13■□□□□ 0.49
SNCG-203ENST00000465679 NKX1-1Q15270 411 aaPredicted RBP18.13■□□□□ 0.49
SNCG-203ENST00000465679 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.13■□□□□ 0.49
SNCG-203ENST00000465679 PKD1L3Q7Z443 1732 aa18.12■□□□□ 0.49
SNCG-203ENST00000465679 IFNL2Q8IZJ0 200 aa18.12■□□□□ 0.49
SNCG-203ENST00000465679 PIGBQ92521 554 aa18.12■□□□□ 0.49
SNCG-203ENST00000465679 FLAD1Q8NFF5 587 aa18.11■□□□□ 0.49
SNCG-203ENST00000465679 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
SNCG-203ENST00000465679 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
SNCG-203ENST00000465679 MORC1Q86VD1 984 aa18.1■□□□□ 0.49
SNCG-203ENST00000465679 CEP350Q5VT06 3117 aa18.1■□□□□ 0.49
SNCG-203ENST00000465679 ITGB4P16144 1822 aa18.09■□□□□ 0.49
SNCG-203ENST00000465679 PHKG2P15735 406 aa18.09■□□□□ 0.49
SNCG-203ENST00000465679 AK7Q96M32 723 aa18.09■□□□□ 0.49
SNCG-203ENST00000465679 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
SNCG-203ENST00000465679 TOGARAM1Q9Y4F4 1720 aa18.08■□□□□ 0.48
SNCG-203ENST00000465679 C5P01031 1676 aa18.08■□□□□ 0.48
SNCG-203ENST00000465679 IGSF1Q8N6C5 1336 aa18.06■□□□□ 0.48
SNCG-203ENST00000465679 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
SNCG-203ENST00000465679 SIK1P57059 783 aa18.06■□□□□ 0.48
SNCG-203ENST00000465679 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
SNCG-203ENST00000465679 GPBP1L1Q9HC44 474 aaPredicted RBP18.06■□□□□ 0.48
SNCG-203ENST00000465679 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
SNCG-203ENST00000465679 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
SNCG-203ENST00000465679 PHF14O94880 888 aa18.04■□□□□ 0.48
SNCG-203ENST00000465679 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
SNCG-203ENST00000465679 ZNF526Q8TF50 670 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms