RNA–Protein interactions for RNA: ENST00000465679.5

SNCG-203, Transcript of synuclein gamma, humanhuman

TSL 2

Gene SNCG, Length 641 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-203ENST00000465679 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
SNCG-203ENST00000465679 ABCC9O60706 1549 aa29.79■■■□□ 2.36
SNCG-203ENST00000465679 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
SNCG-203ENST00000465679 DNAJC5BQ9UF47 199 aa28.26■■■□□ 2.11
SNCG-203ENST00000465679 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
SNCG-203ENST00000465679 NACADO15069 1562 aa27.86■■■□□ 2.05
SNCG-203ENST00000465679 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
SNCG-203ENST00000465679 PABPN1Q86U42 306 aaKnown RBP eCLIP27.69■■■□□ 2.02
SNCG-203ENST00000465679 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
SNCG-203ENST00000465679 MYO15BQ96JP2 1530 aa27.4■■□□□ 1.98
SNCG-203ENST00000465679 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
SNCG-203ENST00000465679 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
SNCG-203ENST00000465679 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
SNCG-203ENST00000465679 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
SNCG-203ENST00000465679 CECR2Q9BXF3 1484 aa26.86■■□□□ 1.89
SNCG-203ENST00000465679 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
SNCG-203ENST00000465679 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
SNCG-203ENST00000465679 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
SNCG-203ENST00000465679 DNAJC5Q9H3Z4 198 aa26.19■■□□□ 1.78
SNCG-203ENST00000465679 CUX2O14529 1486 aa25.78■■□□□ 1.72
SNCG-203ENST00000465679 NCAPD3P42695 1498 aa25.73■■□□□ 1.71
SNCG-203ENST00000465679 ERCC6Q03468 1493 aa25.73■■□□□ 1.71
SNCG-203ENST00000465679 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
SNCG-203ENST00000465679 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
SNCG-203ENST00000465679 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
SNCG-203ENST00000465679 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
SNCG-203ENST00000465679 NESP48681 1621 aa25.48■■□□□ 1.67
SNCG-203ENST00000465679 BAZ1AQ9NRL2 1556 aaPredicted RBP25.47■■□□□ 1.67
SNCG-203ENST00000465679 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
SNCG-203ENST00000465679 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
SNCG-203ENST00000465679 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
SNCG-203ENST00000465679 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
SNCG-203ENST00000465679 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
SNCG-203ENST00000465679 PDS5BQ9NTI5 1447 aa25.09■■□□□ 1.61
SNCG-203ENST00000465679 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
SNCG-203ENST00000465679 WIZO95785 1651 aa24.97■■□□□ 1.59
SNCG-203ENST00000465679 CADPSQ9ULU8 1353 aa24.95■■□□□ 1.59
SNCG-203ENST00000465679 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
SNCG-203ENST00000465679 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.58
SNCG-203ENST00000465679 WDR62O43379 1518 aa24.83■■□□□ 1.57
SNCG-203ENST00000465679 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
SNCG-203ENST00000465679 CEP164Q9UPV0 1460 aa24.73■■□□□ 1.55
SNCG-203ENST00000465679 FANCD2Q9BXW9 1451 aa24.68■■□□□ 1.54
SNCG-203ENST00000465679 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
SNCG-203ENST00000465679 CFTRP13569 1480 aa24.6■■□□□ 1.53
SNCG-203ENST00000465679 OSCARQ8IYS5 282 aa24.56■■□□□ 1.52
SNCG-203ENST00000465679 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
SNCG-203ENST00000465679 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
SNCG-203ENST00000465679 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
SNCG-203ENST00000465679 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
SNCG-203ENST00000465679 RIMBP3CA6NJZ7 1639 aa24.26■■□□□ 1.47
SNCG-203ENST00000465679 RIMBP3BA6NNM3 1639 aa24.26■■□□□ 1.47
SNCG-203ENST00000465679 RIMBP3Q9UFD9 1639 aa24.26■■□□□ 1.47
SNCG-203ENST00000465679 IFT140Q96RY7 1462 aa24.25■■□□□ 1.47
SNCG-203ENST00000465679 ARHGEF11O15085 1522 aa24.17■■□□□ 1.46
SNCG-203ENST00000465679 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
SNCG-203ENST00000465679 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
SNCG-203ENST00000465679 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
SNCG-203ENST00000465679 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
SNCG-203ENST00000465679 CYB5RLQ6IPT4 315 aa24.04■■□□□ 1.44
SNCG-203ENST00000465679 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.436e-6■■■■□ 25.1
SNCG-203ENST00000465679 FBLN2P98095 1184 aa23.95■■□□□ 1.42
SNCG-203ENST00000465679 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.42
SNCG-203ENST00000465679 CHD1O14646 1710 aa23.94■■□□□ 1.42
SNCG-203ENST00000465679 ARAP1Q96P48 1450 aa23.92■■□□□ 1.42
SNCG-203ENST00000465679 POLA1P09884 1462 aaPredicted RBP23.9■■□□□ 1.42
SNCG-203ENST00000465679 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
SNCG-203ENST00000465679 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
SNCG-203ENST00000465679 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
SNCG-203ENST00000465679 SOGA1O94964 1423 aa23.83■■□□□ 1.4
SNCG-203ENST00000465679 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
SNCG-203ENST00000465679 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
SNCG-203ENST00000465679 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
SNCG-203ENST00000465679 CUX1P39880 1505 aa23.74■■□□□ 1.39
SNCG-203ENST00000465679 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
SNCG-203ENST00000465679 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
SNCG-203ENST00000465679 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
SNCG-203ENST00000465679 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
SNCG-203ENST00000465679 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
SNCG-203ENST00000465679 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
SNCG-203ENST00000465679 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
SNCG-203ENST00000465679 GAPVD1Q14C86 1478 aa23.52■■□□□ 1.36
SNCG-203ENST00000465679 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
SNCG-203ENST00000465679 PBRM1Q86U86 1689 aa23.46■■□□□ 1.35
SNCG-203ENST00000465679 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
SNCG-203ENST00000465679 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
SNCG-203ENST00000465679 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
SNCG-203ENST00000465679 TOP2BQ02880 1626 aa23.38■■□□□ 1.33
SNCG-203ENST00000465679 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
SNCG-203ENST00000465679 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
SNCG-203ENST00000465679 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
SNCG-203ENST00000465679 ADAMTS12P58397 1594 aa23.25■■□□□ 1.31
SNCG-203ENST00000465679 NUP160Q12769 1436 aa23.25■■□□□ 1.31
SNCG-203ENST00000465679 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
SNCG-203ENST00000465679 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
SNCG-203ENST00000465679 ERICH3Q5RHP9 1530 aa23.2■■□□□ 1.3
SNCG-203ENST00000465679 SHROOM2Q13796 1616 aa23.14■■□□□ 1.29
SNCG-203ENST00000465679 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
SNCG-203ENST00000465679 JPH4Q96JJ6 628 aa23.02■■□□□ 1.28
SNCG-203ENST00000465679 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms