RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-205ENST00000464870 PARP4Q9UKK3 1724 aaKnown RBP16.43■□□□□ 0.22
PTPN7-205ENST00000464870 TRIM37O94972 964 aa16.43■□□□□ 0.22
PTPN7-205ENST00000464870 IL13P35225 146 aa16.43■□□□□ 0.22
PTPN7-205ENST00000464870 WDR43Q15061 677 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTPN7-205ENST00000464870 ZCRB1Q8TBF4 217 aaKnown RBP16.43■□□□□ 0.22
PTPN7-205ENST00000464870 ADAMTS8Q9UP79 889 aa16.43■□□□□ 0.22
PTPN7-205ENST00000464870 EP400Q96L91 3159 aa16.42■□□□□ 0.22
PTPN7-205ENST00000464870 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
PTPN7-205ENST00000464870 BAG6P46379 1132 aa16.42■□□□□ 0.22
PTPN7-205ENST00000464870 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
PTPN7-205ENST00000464870 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
PTPN7-205ENST00000464870 NUDCQ9Y266 331 aa16.41■□□□□ 0.22
PTPN7-205ENST00000464870 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
PTPN7-205ENST00000464870 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTPN7-205ENST00000464870 LRRC37A3O60309 1634 aa16.4■□□□□ 0.22
PTPN7-205ENST00000464870 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
PTPN7-205ENST00000464870 SENP3-EIF4A1A0A087X0R7 540 aa16.39■□□□□ 0.21
PTPN7-205ENST00000464870 MEGF6O75095 1541 aa16.39■□□□□ 0.21
PTPN7-205ENST00000464870 BCL9O00512 1426 aa16.38■□□□□ 0.21
PTPN7-205ENST00000464870 APBA3O96018 575 aa16.38■□□□□ 0.21
PTPN7-205ENST00000464870 DEFB132Q7Z7B7 95 aa16.38■□□□□ 0.21
PTPN7-205ENST00000464870 SPG7Q9UQ90 795 aa16.38■□□□□ 0.21
PTPN7-205ENST00000464870 NCAPD2Q15021 1401 aa16.37■□□□□ 0.21
PTPN7-205ENST00000464870 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
PTPN7-205ENST00000464870 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-205ENST00000464870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPN7-205ENST00000464870 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
PTPN7-205ENST00000464870 HMOX1P09601 288 aa16.36■□□□□ 0.21
PTPN7-205ENST00000464870 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
PTPN7-205ENST00000464870 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
PTPN7-205ENST00000464870 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
PTPN7-205ENST00000464870 EN1Q05925 392 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-205ENST00000464870 ACSBG1Q96GR2 724 aa16.35■□□□□ 0.21
PTPN7-205ENST00000464870 PLEKHO1Q53GL0 409 aaPredicted RBP16.34■□□□□ 0.21
PTPN7-205ENST00000464870 AEBP1Q8IUX7 1158 aa16.34■□□□□ 0.21
PTPN7-205ENST00000464870 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.21
PTPN7-205ENST00000464870 AMOTQ4VCS5 1084 aa16.33■□□□□ 0.2
PTPN7-205ENST00000464870 PLEKHG2Q9H7P9 1386 aa16.33■□□□□ 0.2
PTPN7-205ENST00000464870 CYP27B1O15528 508 aa16.32■□□□□ 0.2
PTPN7-205ENST00000464870 KCNQ2O43526 872 aa16.32■□□□□ 0.2
PTPN7-205ENST00000464870 RSPH6AQ9H0K4 717 aa16.32■□□□□ 0.2
PTPN7-205ENST00000464870 HNRNPUQ00839 825 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPN7-205ENST00000464870 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
PTPN7-205ENST00000464870 SYTL4Q96C24 671 aaPredicted RBP16.31■□□□□ 0.2
PTPN7-205ENST00000464870 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
PTPN7-205ENST00000464870 KDRP35968 1356 aa16.3■□□□□ 0.2
PTPN7-205ENST00000464870 PLSCR1O15162 318 aa16.3■□□□□ 0.2
PTPN7-205ENST00000464870 FCHSD2O94868 740 aa16.3■□□□□ 0.2
PTPN7-205ENST00000464870 PRKAR2BP31323 418 aa16.3■□□□□ 0.2
PTPN7-205ENST00000464870 PRIM1P49642 420 aaKnown RBP16.3■□□□□ 0.2
PTPN7-205ENST00000464870 EZH2Q15910 746 aaKnown RBP16.3■□□□□ 0.2
PTPN7-205ENST00000464870 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
PTPN7-205ENST00000464870 PLEKHF1Q96S99 279 aa16.3■□□□□ 0.2
PTPN7-205ENST00000464870 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
PTPN7-205ENST00000464870 RGPD1P0DJD0 1748 aa16.29■□□□□ 0.2
PTPN7-205ENST00000464870 APAF1O14727 1248 aa16.29■□□□□ 0.2
PTPN7-205ENST00000464870 RUNDC1Q96C34 613 aa16.29■□□□□ 0.2
PTPN7-205ENST00000464870 PHKG2P15735 406 aa16.28■□□□□ 0.2
PTPN7-205ENST00000464870 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-205ENST00000464870 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-205ENST00000464870 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
PTPN7-205ENST00000464870 HSP90AB1P08238 724 aaKnown RBP16.27■□□□□ 0.2
PTPN7-205ENST00000464870 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
PTPN7-205ENST00000464870 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
PTPN7-205ENST00000464870 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
PTPN7-205ENST00000464870 PNNQ9H307 717 aaKnown RBP16.25■□□□□ 0.19
PTPN7-205ENST00000464870 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
PTPN7-205ENST00000464870 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
PTPN7-205ENST00000464870 TNS1Q9HBL0 1735 aaKnown RBP16.24■□□□□ 0.19
PTPN7-205ENST00000464870 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
PTPN7-205ENST00000464870 NBPF14Q5TI25 921 aa16.23■□□□□ 0.19
PTPN7-205ENST00000464870 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
PTPN7-205ENST00000464870 NEFMP07197 916 aa16.22■□□□□ 0.19
PTPN7-205ENST00000464870 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
PTPN7-205ENST00000464870 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
PTPN7-205ENST00000464870 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
PTPN7-205ENST00000464870 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
PTPN7-205ENST00000464870 ERVV-2B6SEH9 535 aa16.21■□□□□ 0.19
PTPN7-205ENST00000464870 MTHFSDQ2M296 383 aaKnown RBP16.21■□□□□ 0.19
PTPN7-205ENST00000464870 PROM2Q8N271 834 aa16.21■□□□□ 0.19
PTPN7-205ENST00000464870 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.19
PTPN7-205ENST00000464870 NHSQ6T4R5 1651 aa16.21■□□□□ 0.18
PTPN7-205ENST00000464870 SHANK3Q9BYB0 1731 aa16.2■□□□□ 0.18
PTPN7-205ENST00000464870 SBF2Q86WG5 1849 aa16.2■□□□□ 0.18
PTPN7-205ENST00000464870 PIGBQ92521 554 aa16.2■□□□□ 0.18
PTPN7-205ENST00000464870 RIPK4P57078 832 aa16.19■□□□□ 0.18
PTPN7-205ENST00000464870 CABP4P57796 275 aa16.19■□□□□ 0.18
PTPN7-205ENST00000464870 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
PTPN7-205ENST00000464870 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-205ENST00000464870 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
PTPN7-205ENST00000464870 ZBED9Q6R2W3 1325 aa16.18■□□□□ 0.18
PTPN7-205ENST00000464870 GNAT3A8MTJ3 354 aa16.16■□□□□ 0.18
PTPN7-205ENST00000464870 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
PTPN7-205ENST00000464870 R3HDM1Q15032 1099 aaKnown RBP16.16■□□□□ 0.18
PTPN7-205ENST00000464870 TRIM35Q9UPQ4 493 aa16.16■□□□□ 0.18
PTPN7-205ENST00000464870 DOT1LQ8TEK3 1739 aa16.16■□□□□ 0.18
PTPN7-205ENST00000464870 PSDA5PKW4 1024 aaPredicted RBP16.15■□□□□ 0.18
PTPN7-205ENST00000464870 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
PTPN7-205ENST00000464870 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
PTPN7-205ENST00000464870 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms