RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CDC45O75419 566 aa21.07■□□□□ 0.96
ACTB-207ENST00000462494 GSPT1P15170 499 aaKnown RBP21.07■□□□□ 0.96
ACTB-207ENST00000462494 C16orf71Q8IYS4 520 aaPredicted RBP21.07■□□□□ 0.96
ACTB-207ENST00000462494 RGS12O14924 1447 aa21.07■□□□□ 0.96
ACTB-207ENST00000462494 MTHFSDQ2M296 383 aaKnown RBP21.06■□□□□ 0.96
ACTB-207ENST00000462494 ANKRD44Q8N8A2 993 aa21.06■□□□□ 0.96
ACTB-207ENST00000462494 KIF2CQ99661 725 aa21.06■□□□□ 0.96
ACTB-207ENST00000462494 MSH6P52701 1360 aa21.06■□□□□ 0.96
ACTB-207ENST00000462494 AMPHP49418 695 aa21.06■□□□□ 0.96
ACTB-207ENST00000462494 ARXQ96QS3 562 aa21.06■□□□□ 0.96
ACTB-207ENST00000462494 GZF1Q9H116 711 aaPredicted RBP21.06■□□□□ 0.96
ACTB-207ENST00000462494 TSPYL4Q9UJ04 414 aa21.06■□□□□ 0.96
ACTB-207ENST00000462494 PTPRCP08575 1304 aa21.05■□□□□ 0.96
ACTB-207ENST00000462494 NALCNQ8IZF0 1738 aa21.05■□□□□ 0.96
ACTB-207ENST00000462494 CEP85Q6P2H3 762 aa21.05■□□□□ 0.96
ACTB-207ENST00000462494 MEIS3Q99687 375 aa21.05■□□□□ 0.96
ACTB-207ENST00000462494 TTC21AQ8NDW8 1320 aa21.05■□□□□ 0.96
ACTB-207ENST00000462494 CRB1P82279 1406 aa21.05■□□□□ 0.96
ACTB-207ENST00000462494 ARHGEF10O15013 1369 aa21.04■□□□□ 0.96
ACTB-207ENST00000462494 HSP90AA1P07900 732 aaKnown RBP21.04■□□□□ 0.96
ACTB-207ENST00000462494 SSH2Q76I76 1423 aa21.04■□□□□ 0.96
ACTB-207ENST00000462494 RPAP2Q8IXW5 612 aaPredicted RBP21.04■□□□□ 0.96
ACTB-207ENST00000462494 RGPD1P0DJD0 1748 aa21.04■□□□□ 0.96
ACTB-207ENST00000462494 RBM42Q9BTD8 480 aaKnown RBP21.04■□□□□ 0.96
ACTB-207ENST00000462494 FOXD4L1Q9NU39 408 aa21.04■□□□□ 0.96
ACTB-207ENST00000462494 CD2BP2O95400 341 aaKnown RBP21.03■□□□□ 0.96
ACTB-207ENST00000462494 SLC4A10Q6U841 1118 aa21.03■□□□□ 0.96
ACTB-207ENST00000462494 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
ACTB-207ENST00000462494 NCOA3Q9Y6Q9 1424 aa21.03■□□□□ 0.96
ACTB-207ENST00000462494 FLT4P35916 1363 aa21.03■□□□□ 0.96
ACTB-207ENST00000462494 RTL1A6NKG5 1358 aa21.02■□□□□ 0.96
ACTB-207ENST00000462494 SMARCA5O60264 1052 aaPredicted RBP21.02■□□□□ 0.96
ACTB-207ENST00000462494 TTC22Q5TAA0 569 aa21.02■□□□□ 0.96
ACTB-207ENST00000462494 OTUD7AQ8TE49 926 aaPredicted RBP21.02■□□□□ 0.96
ACTB-207ENST00000462494 RIMS1Q86UR5 1692 aaKnown RBP21.02■□□□□ 0.95
ACTB-207ENST00000462494 SBNO1A3KN83 1393 aa21.02■□□□□ 0.95
ACTB-207ENST00000462494 TRAK2O60296 914 aa21.01■□□□□ 0.95
ACTB-207ENST00000462494 EYA1Q99502 592 aa21.01■□□□□ 0.95
ACTB-207ENST00000462494 F6X3S4 739 aa21.01■□□□□ 0.95
ACTB-207ENST00000462494 DDIT3P35638 169 aa21.01■□□□□ 0.95
ACTB-207ENST00000462494 L1TD1Q5T7N2 865 aaKnown RBP21.01■□□□□ 0.95
ACTB-207ENST00000462494 NUTM2GQ5VZR2 741 aa21.01■□□□□ 0.95
ACTB-207ENST00000462494 G2E3Q7L622 706 aa21.01■□□□□ 0.95
ACTB-207ENST00000462494 TBX22Q9Y458 520 aa21■□□□□ 0.95
ACTB-207ENST00000462494 NLRP6P59044 892 aa21■□□□□ 0.95
ACTB-207ENST00000462494 K7ELQ4 463 aaPredicted RBP20.98■□□□□ 0.95
ACTB-207ENST00000462494 GAS2L2Q8NHY3 880 aa20.98■□□□□ 0.95
ACTB-207ENST00000462494 FMN2Q9NZ56 1722 aa20.98■□□□□ 0.95
ACTB-207ENST00000462494 RGPD8O14715 1765 aaPredicted RBP20.98■□□□□ 0.95
ACTB-207ENST00000462494 DDX11L8A8MPP1 907 aa20.97■□□□□ 0.95
ACTB-207ENST00000462494 TNPO1Q92973 898 aaKnown RBP20.97■□□□□ 0.95
ACTB-207ENST00000462494 DIP2AQ14689 1571 aa20.97■□□□□ 0.95
ACTB-207ENST00000462494 GOLGA6L3A6NEY3 463 aa20.97■□□□□ 0.95
ACTB-207ENST00000462494 IGSF1Q8N6C5 1336 aa20.96■□□□□ 0.95
ACTB-207ENST00000462494 CEP170BQ9Y4F5 1589 aaPredicted RBP20.96■□□□□ 0.95
ACTB-207ENST00000462494 KDRP35968 1356 aa20.96■□□□□ 0.95
ACTB-207ENST00000462494 CIZ1Q9ULV3 898 aaPredicted RBP20.96■□□□□ 0.95
ACTB-207ENST00000462494 THEMISQ8N1K5 641 aaPredicted RBP20.95■□□□□ 0.94
ACTB-207ENST00000462494 NECTIN2Q92692 538 aa20.95■□□□□ 0.94
ACTB-207ENST00000462494 STK31Q9BXU1 1019 aa20.95■□□□□ 0.94
ACTB-207ENST00000462494 HMMRO75330 724 aa20.94■□□□□ 0.94
ACTB-207ENST00000462494 SDSP20132 328 aa20.94■□□□□ 0.94
ACTB-207ENST00000462494 LTV1Q96GA3 475 aaPredicted RBP20.94■□□□□ 0.94
ACTB-207ENST00000462494 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
ACTB-207ENST00000462494 CCT4P50991 539 aaKnown RBP20.94■□□□□ 0.94
ACTB-207ENST00000462494 SLIT1O75093 1534 aa20.94■□□□□ 0.94
ACTB-207ENST00000462494 ARHGAP23Q9P227 1491 aa20.93■□□□□ 0.94
ACTB-207ENST00000462494 RAB3GAP1Q15042 981 aa20.93■□□□□ 0.94
ACTB-207ENST00000462494 CASC1Q6TDU7 716 aa20.93■□□□□ 0.94
ACTB-207ENST00000462494 GNAT3A8MTJ3 354 aa20.92■□□□□ 0.94
ACTB-207ENST00000462494 C14orf37Q86TY3 774 aa20.92■□□□□ 0.94
ACTB-207ENST00000462494 GBP4Q96PP9 640 aa20.92■□□□□ 0.94
ACTB-207ENST00000462494 PIK3C2AO00443 1686 aa20.92■□□□□ 0.94
ACTB-207ENST00000462494 HOXC9P31274 260 aa20.92■□□□□ 0.94
ACTB-207ENST00000462494 ABTB2Q8N961 1025 aa20.92■□□□□ 0.94
ACTB-207ENST00000462494 USP26Q9BXU7 913 aa20.92■□□□□ 0.94
ACTB-207ENST00000462494 KCNA6P17658 529 aa20.91■□□□□ 0.94
ACTB-207ENST00000462494 FKBP5Q13451 457 aaPredicted RBP20.9■□□□□ 0.94
ACTB-207ENST00000462494 GNAI2P04899 355 aa20.9■□□□□ 0.94
ACTB-207ENST00000462494 XRCC6P12956 609 aaKnown RBP eCLIP20.9■□□□□ 0.944e-22■□□□□ 8.8
ACTB-207ENST00000462494 RABEP1Q15276 862 aa20.9■□□□□ 0.94
ACTB-207ENST00000462494 FSD2A1L4K1 749 aa20.89■□□□□ 0.94
ACTB-207ENST00000462494 FLIIQ13045 1269 aa20.89■□□□□ 0.94
ACTB-207ENST00000462494 CCDC30Q5VVM6 783 aa20.89■□□□□ 0.94
ACTB-207ENST00000462494 HTATSF1O43719 755 aaKnown RBP20.89■□□□□ 0.93
ACTB-207ENST00000462494 EXOC6BQ9Y2D4 811 aa20.89■□□□□ 0.93
ACTB-207ENST00000462494 USHBP1Q8N6Y0 703 aa20.87■□□□□ 0.93
ACTB-207ENST00000462494 SSFA2P28290 1259 aa20.86■□□□□ 0.93
ACTB-207ENST00000462494 IL17REQ8NFR9 667 aa20.86■□□□□ 0.93
ACTB-207ENST00000462494 PDE1AP54750 535 aa20.85■□□□□ 0.93
ACTB-207ENST00000462494 TSHZ3Q63HK5 1081 aa20.85■□□□□ 0.93
ACTB-207ENST00000462494 FAM43AQ8N2R8 423 aa20.85■□□□□ 0.93
ACTB-207ENST00000462494 PANK2Q9BZ23 570 aa20.85■□□□□ 0.93
ACTB-207ENST00000462494 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
ACTB-207ENST00000462494 ANKARQ7Z5J8 1434 aa20.84■□□□□ 0.93
ACTB-207ENST00000462494 REC8O95072 547 aa20.84■□□□□ 0.93
ACTB-207ENST00000462494 GNAI3P08754 354 aa20.84■□□□□ 0.93
ACTB-207ENST00000462494 TAF7Q15545 349 aaPredicted RBP20.84■□□□□ 0.93
ACTB-207ENST00000462494 FER1L4A9Z1Z3 1794 aa20.83■□□□□ 0.93
ACTB-207ENST00000462494 PNMA6EA0A0J9YXQ4 647 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms